RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
LINC01088-209ENST00000512130 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
LINC01088-209ENST00000512130 DDRGK1Q96HY6 314 aa11.41□□□□□ -0.58
LINC01088-209ENST00000512130 FOSBP53539 338 aa11.39□□□□□ -0.59
LINC01088-209ENST00000512130 TSR1Q2NL82 804 aaKnown RBP11.39□□□□□ -0.59
LINC01088-209ENST00000512130 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
LINC01088-209ENST00000512130 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
LINC01088-209ENST00000512130 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
LINC01088-209ENST00000512130 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 NUDT7P0C024 238 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 FAM117AQ9C073 453 aa11.36□□□□□ -0.59
LINC01088-209ENST00000512130 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
LINC01088-209ENST00000512130 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
LINC01088-209ENST00000512130 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
LINC01088-209ENST00000512130 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
LINC01088-209ENST00000512130 SNPHO15079 494 aa11.33□□□□□ -0.6
LINC01088-209ENST00000512130 CLCN1P35523 988 aa11.33□□□□□ -0.6
LINC01088-209ENST00000512130 OATP04181 439 aa11.32□□□□□ -0.6
LINC01088-209ENST00000512130 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
LINC01088-209ENST00000512130 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.67e-7■■□□□ 12.3
LINC01088-209ENST00000512130 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
LINC01088-209ENST00000512130 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
LINC01088-209ENST00000512130 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
LINC01088-209ENST00000512130 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
LINC01088-209ENST00000512130 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
LINC01088-209ENST00000512130 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
LINC01088-209ENST00000512130 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
LINC01088-209ENST00000512130 MDM2Q00987 491 aaPredicted RBP11.27□□□□□ -0.61
LINC01088-209ENST00000512130 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
LINC01088-209ENST00000512130 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
LINC01088-209ENST00000512130 PRSS12P56730 875 aa11.25□□□□□ -0.61
LINC01088-209ENST00000512130 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
LINC01088-209ENST00000512130 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
LINC01088-209ENST00000512130 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
LINC01088-209ENST00000512130 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
LINC01088-209ENST00000512130 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
LINC01088-209ENST00000512130 MS4A1P11836 297 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 PTPREP23469 700 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
LINC01088-209ENST00000512130 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 PXYLP1Q8TE99 480 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 TTC13Q8NBP0 860 aa11.21□□□□□ -0.61
LINC01088-209ENST00000512130 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
LINC01088-209ENST00000512130 PHOX2BQ99453 314 aa11.21□□□□□ -0.61
LINC01088-209ENST00000512130 REPIN1Q9BWE0 567 aaKnown RBP11.21□□□□□ -0.61
LINC01088-209ENST00000512130 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
LINC01088-209ENST00000512130 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
LINC01088-209ENST00000512130 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
LINC01088-209ENST00000512130 PPP1R3GB7ZBB8 358 aa11.18□□□□□ -0.62
LINC01088-209ENST00000512130 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
LINC01088-209ENST00000512130 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
LINC01088-209ENST00000512130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.16□□□□□ -0.62
LINC01088-209ENST00000512130 BEGAINQ9BUH8 593 aa11.16□□□□□ -0.62
LINC01088-209ENST00000512130 COL9A1P20849 921 aa11.15□□□□□ -0.62
LINC01088-209ENST00000512130 SH3D19Q5HYK7 790 aa11.15□□□□□ -0.62
LINC01088-209ENST00000512130 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
LINC01088-209ENST00000512130 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
LINC01088-209ENST00000512130 NLRP7Q8WX94 980 aa11.14□□□□□ -0.63
LINC01088-209ENST00000512130 FLIIQ13045 1269 aa11.11□□□□□ -0.63
LINC01088-209ENST00000512130 SKIV2LQ15477 1246 aaKnown RBP11.11□□□□□ -0.63
LINC01088-209ENST00000512130 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
LINC01088-209ENST00000512130 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
LINC01088-209ENST00000512130 RCCD1A6NED2 376 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 NUDT18Q6ZVK8 323 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 EYA1Q99502 592 aa11.09□□□□□ -0.63
LINC01088-209ENST00000512130 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
LINC01088-209ENST00000512130 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
LINC01088-209ENST00000512130 DNAJB2P25686 324 aa11.08□□□□□ -0.64
LINC01088-209ENST00000512130 TATDN2Q93075 761 aa11.08□□□□□ -0.64
LINC01088-209ENST00000512130 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
LINC01088-209ENST00000512130 ZMYND15Q9H091 742 aa11.07□□□□□ -0.64
LINC01088-209ENST00000512130 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
LINC01088-209ENST00000512130 ERBB3P21860 1342 aa11.05□□□□□ -0.64
LINC01088-209ENST00000512130 SUPT5HO00267 1087 aaKnown RBP11.04□□□□□ -0.64
LINC01088-209ENST00000512130 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
LINC01088-209ENST00000512130 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
LINC01088-209ENST00000512130 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
LINC01088-209ENST00000512130 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.65
LINC01088-209ENST00000512130 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 CD46P15529 392 aa11□□□□□ -0.65
LINC01088-209ENST00000512130 LHX8Q68G74 356 aa11□□□□□ -0.65
LINC01088-209ENST00000512130 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
LINC01088-209ENST00000512130 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
LINC01088-209ENST00000512130 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
LINC01088-209ENST00000512130 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
LINC01088-209ENST00000512130 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
LINC01088-209ENST00000512130 RDH13Q8NBN7 331 aa10.99□□□□□ -0.65
LINC01088-209ENST00000512130 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
LINC01088-209ENST00000512130 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms