RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 DSG2Q14126 1118 aa8.55□□□□□ -1.04
NEK1-204ENST00000509912 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
NEK1-204ENST00000509912 SMYD5Q6GMV2 418 aa8.53□□□□□ -1.04
NEK1-204ENST00000509912 PAK3O75914 559 aaPredicted RBP8.52□□□□□ -1.04
NEK1-204ENST00000509912 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
NEK1-204ENST00000509912 MS4A3Q96HJ5 214 aa8.52□□□□□ -1.05
NEK1-204ENST00000509912 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
NEK1-204ENST00000509912 ZNF316A6NFI3 1004 aaPredicted RBP8.51□□□□□ -1.05
NEK1-204ENST00000509912 UPF1Q92900 1129 aaKnown RBP eCLIP8.51□□□□□ -1.05
NEK1-204ENST00000509912 KIF27Q86VH2 1401 aa8.51□□□□□ -1.05
NEK1-204ENST00000509912 HRCP23327 699 aa8.51□□□□□ -1.05
NEK1-204ENST00000509912 EEA1Q15075 1411 aa8.51□□□□□ -1.05
NEK1-204ENST00000509912 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
NEK1-204ENST00000509912 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
NEK1-204ENST00000509912 PLEKHG3A1L390 1219 aa8.49□□□□□ -1.05
NEK1-204ENST00000509912 KDM5BQ9UGL1 1544 aa8.49□□□□□ -1.05
NEK1-204ENST00000509912 APBB1O00213 710 aa8.49□□□□□ -1.05
NEK1-204ENST00000509912 GPR37O15354 613 aa8.49□□□□□ -1.05
NEK1-204ENST00000509912 DDX12PQ92771 950 aa8.48□□□□□ -1.05
NEK1-204ENST00000509912 CCDC102AQ96A19 550 aa8.48□□□□□ -1.05
NEK1-204ENST00000509912 KIF13AQ9H1H9 1805 aa8.47□□□□□ -1.05
NEK1-204ENST00000509912 PIP4P2Q8N4L2 257 aa8.47□□□□□ -1.05
NEK1-204ENST00000509912 CLUAP1Q96AJ1 413 aa8.47□□□□□ -1.05
NEK1-204ENST00000509912 PHLDB1Q86UU1 1377 aa8.47□□□□□ -1.05
NEK1-204ENST00000509912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.052e-6■■■■□ 23.4
NEK1-204ENST00000509912 FXR2P51116 673 aaKnown RBP eCLIP8.46□□□□□ -1.05
NEK1-204ENST00000509912 ABCC10Q5T3U5 1492 aa8.46□□□□□ -1.05
NEK1-204ENST00000509912 IGF1RP08069 1367 aa8.46□□□□□ -1.06
NEK1-204ENST00000509912 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
NEK1-204ENST00000509912 CTTNBP2Q8WZ74 1663 aa8.46□□□□□ -1.06
NEK1-204ENST00000509912 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.06
NEK1-204ENST00000509912 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
NEK1-204ENST00000509912 NLRP7Q8WX94 980 aa8.45□□□□□ -1.06
NEK1-204ENST00000509912 GOLGA3Q08378 1498 aa8.45□□□□□ -1.06
NEK1-204ENST00000509912 CYB5RLQ6IPT4 315 aa8.44□□□□□ -1.06
NEK1-204ENST00000509912 TDRD9Q8NDG6 1382 aaKnown RBP8.44□□□□□ -1.06
NEK1-204ENST00000509912 IQGAP2Q13576 1575 aa8.43□□□□□ -1.06
NEK1-204ENST00000509912 DIP2BQ9P265 1576 aa8.43□□□□□ -1.06
NEK1-204ENST00000509912 PLB1Q6P1J6 1458 aa8.43□□□□□ -1.06
NEK1-204ENST00000509912 TTLL12Q14166 644 aaPredicted RBP8.43□□□□□ -1.06
NEK1-204ENST00000509912 MAP3K4Q9Y6R4 1608 aa8.43□□□□□ -1.06
NEK1-204ENST00000509912 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
NEK1-204ENST00000509912 PDIA6Q15084 440 aa8.43□□□□□ -1.06
NEK1-204ENST00000509912 REPIN1Q9BWE0 567 aaKnown RBP8.43□□□□□ -1.06
NEK1-204ENST00000509912 CHRDL2Q6WN34 429 aa8.42□□□□□ -1.06
NEK1-204ENST00000509912 ADCY10Q96PN6 1610 aa8.42□□□□□ -1.06
NEK1-204ENST00000509912 CFAP43Q8NDM7 1665 aa8.41□□□□□ -1.06
NEK1-204ENST00000509912 PRXQ9BXM0 1461 aa8.41□□□□□ -1.06
NEK1-204ENST00000509912 TTLL13PA6NNM8 815 aa8.41□□□□□ -1.06
NEK1-204ENST00000509912 TRIM35Q9UPQ4 493 aa8.41□□□□□ -1.06
NEK1-204ENST00000509912 ARIH1Q9Y4X5 557 aaPredicted RBP8.41□□□□□ -1.06
NEK1-204ENST00000509912 C2orf72A6NCS6 295 aa8.41□□□□□ -1.06
NEK1-204ENST00000509912 ABCC2Q92887 1545 aa8.41□□□□□ -1.06
NEK1-204ENST00000509912 SAMD9Q5K651 1589 aa8.4□□□□□ -1.06
NEK1-204ENST00000509912 CARMIL2Q6F5E8 1435 aa8.4□□□□□ -1.06
NEK1-204ENST00000509912 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.06
NEK1-204ENST00000509912 RAPGEF2Q9Y4G8 1499 aa8.4□□□□□ -1.07
NEK1-204ENST00000509912 ABCA8O94911 1581 aa8.4□□□□□ -1.07
NEK1-204ENST00000509912 FAM161AQ3B820 660 aa8.4□□□□□ -1.07
NEK1-204ENST00000509912 PLPP6Q8IY26 295 aa8.4□□□□□ -1.07
NEK1-204ENST00000509912 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
NEK1-204ENST00000509912 MICALL2Q8IY33 904 aa8.39□□□□□ -1.07
NEK1-204ENST00000509912 TNIKQ9UKE5 1360 aa8.39□□□□□ -1.07
NEK1-204ENST00000509912 ARAP3Q8WWN8 1544 aa8.39□□□□□ -1.07
NEK1-204ENST00000509912 KIAA0556O60303 1618 aa8.39□□□□□ -1.07
NEK1-204ENST00000509912 MS4A1P11836 297 aa8.37□□□□□ -1.07
NEK1-204ENST00000509912 IRF6O14896 467 aa8.37□□□□□ -1.07
NEK1-204ENST00000509912 PPRC1Q5VV67 1664 aaKnown RBP8.37□□□□□ -1.07
NEK1-204ENST00000509912 EFCAB5A4FU69 1503 aa8.37□□□□□ -1.07
NEK1-204ENST00000509912 DISP1Q96F81 1524 aa8.37□□□□□ -1.07
NEK1-204ENST00000509912 KIF21BO75037 1637 aa8.37□□□□□ -1.07
NEK1-204ENST00000509912 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
NEK1-204ENST00000509912 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
NEK1-204ENST00000509912 BMP2KQ9NSY1 1161 aaPredicted RBP8.36□□□□□ -1.07
NEK1-204ENST00000509912 PRG4Q92954 1404 aaPredicted RBP8.36□□□□□ -1.07
NEK1-204ENST00000509912 ATP1B4Q9UN42 357 aaPredicted RBP8.36□□□□□ -1.07
NEK1-204ENST00000509912 TMC2Q8TDI7 906 aa8.35□□□□□ -1.07
NEK1-204ENST00000509912 TEX14Q8IWB6 1497 aa8.35□□□□□ -1.07
NEK1-204ENST00000509912 OSBPP22059 807 aa8.35□□□□□ -1.07
NEK1-204ENST00000509912 MAP3K9P80192 1104 aa8.35□□□□□ -1.07
NEK1-204ENST00000509912 CFAP74Q9C0B2 1584 aa8.34□□□□□ -1.07
NEK1-204ENST00000509912 CARMIL1Q5VZK9 1371 aa8.34□□□□□ -1.07
NEK1-204ENST00000509912 FOXK1P85037 733 aa8.33□□□□□ -1.08
NEK1-204ENST00000509912 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
NEK1-204ENST00000509912 TMEM92Q6UXU6 159 aa8.33□□□□□ -1.08
NEK1-204ENST00000509912 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
NEK1-204ENST00000509912 POM121Q96HA1 1249 aa8.33□□□□□ -1.08
NEK1-204ENST00000509912 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
NEK1-204ENST00000509912 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
NEK1-204ENST00000509912 ERCC6L2Q5T890 1561 aa8.32□□□□□ -1.08
NEK1-204ENST00000509912 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
NEK1-204ENST00000509912 PHOX2BQ99453 314 aa8.32□□□□□ -1.08
NEK1-204ENST00000509912 UACAQ9BZF9 1416 aa8.32□□□□□ -1.08
NEK1-204ENST00000509912 GNPATO15228 680 aa8.32□□□□□ -1.08
NEK1-204ENST00000509912 ZNF777Q9ULD5 760 aaPredicted RBP8.32□□□□□ -1.08
NEK1-204ENST00000509912 ABCA9Q8IUA7 1624 aa8.31□□□□□ -1.08
NEK1-204ENST00000509912 JPH4Q96JJ6 628 aa8.31□□□□□ -1.08
NEK1-204ENST00000509912 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
NEK1-204ENST00000509912 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
NEK1-204ENST00000509912 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms