RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MAPK8IP3Q9UPT6 1336 aa6.83□□□□□ -1.32
PHF3-210ENST00000509876 ITSN2Q9NZM3 1697 aa6.83□□□□□ -1.32
PHF3-210ENST00000509876 ERICH6Q7L0X2 663 aa6.83□□□□□ -1.32
PHF3-210ENST00000509876 DHX57Q6P158 1386 aaKnown RBP6.83□□□□□ -1.32
PHF3-210ENST00000509876 DNAJC5Q9H3Z4 198 aa6.83□□□□□ -1.32
PHF3-210ENST00000509876 SOX12O15370 315 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 FAM9BQ8IZU0 186 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 NUP153P49790 1475 aaKnown RBP6.82□□□□□ -1.32
PHF3-210ENST00000509876 ZNF518AQ6AHZ1 1483 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 MORC1Q86VD1 984 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 MRS2Q9HD23 443 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 TRAK1Q9UPV9 953 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 PTPN23Q9H3S7 1636 aa6.82□□□□□ -1.32
PHF3-210ENST00000509876 DAXXQ9UER7 740 aaPredicted RBP6.81□□□□□ -1.32
PHF3-210ENST00000509876 EVC2Q86UK5 1308 aa6.81□□□□□ -1.32
PHF3-210ENST00000509876 PROSER2Q86WR7 435 aaPredicted RBP6.81□□□□□ -1.32
PHF3-210ENST00000509876 DISP1Q96F81 1524 aa6.81□□□□□ -1.32
PHF3-210ENST00000509876 CFAP74Q9C0B2 1584 aa6.81□□□□□ -1.32
PHF3-210ENST00000509876 TNNT2P45379 298 aaPredicted RBP6.81□□□□□ -1.32
PHF3-210ENST00000509876 ROCK1Q13464 1354 aa6.8□□□□□ -1.32
PHF3-210ENST00000509876 HFM1A2PYH4 1435 aa6.8□□□□□ -1.32
PHF3-210ENST00000509876 L3MBTL2Q969R5 705 aa6.8□□□□□ -1.32
PHF3-210ENST00000509876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.8□□□□□ -1.32
PHF3-210ENST00000509876 CC2D1BQ5T0F9 858 aaKnown RBP6.79□□□□□ -1.32
PHF3-210ENST00000509876 RPGRIP1LQ68CZ1 1315 aa6.79□□□□□ -1.32
PHF3-210ENST00000509876 UHRF1BP1LA0JNW5 1464 aa6.79□□□□□ -1.32
PHF3-210ENST00000509876 HSPA5P11021 654 aaKnown RBP6.79□□□□□ -1.32
PHF3-210ENST00000509876 NUTM2FA1L443 756 aa6.79□□□□□ -1.32
PHF3-210ENST00000509876 PSME1Q06323 249 aa6.79□□□□□ -1.32
PHF3-210ENST00000509876 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.79□□□□□ -1.32
PHF3-210ENST00000509876 U2SURPO15042 1029 aaKnown RBP6.78□□□□□ -1.32
PHF3-210ENST00000509876 ABCC10Q5T3U5 1492 aa6.78□□□□□ -1.32
PHF3-210ENST00000509876 ARXQ96QS3 562 aa6.78□□□□□ -1.32
PHF3-210ENST00000509876 DHX29Q7Z478 1369 aaKnown RBP6.78□□□□□ -1.32
PHF3-210ENST00000509876 NPHP1O15259 732 aa6.78□□□□□ -1.32
PHF3-210ENST00000509876 GPATCH8Q9UKJ3 1502 aaKnown RBP6.78□□□□□ -1.32
PHF3-210ENST00000509876 MINK1Q8N4C8 1332 aaPredicted RBP6.78□□□□□ -1.32
PHF3-210ENST00000509876 EVA1CP58658 441 aa6.77□□□□□ -1.33
PHF3-210ENST00000509876 KIAA1107Q9UPP5 1409 aa6.77□□□□□ -1.33
PHF3-210ENST00000509876 SALL2Q9Y467 1007 aaPredicted RBP6.77□□□□□ -1.33
PHF3-210ENST00000509876 HNRNPUQ00839 825 aaKnown RBP eCLIP6.77□□□□□ -1.33
PHF3-210ENST00000509876 KTN1Q86UP2 1357 aaKnown RBP6.77□□□□□ -1.33
PHF3-210ENST00000509876 ABCC5O15440 1437 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 AMPHP49418 695 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 NEO1Q92859 1461 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 BCL11AQ9H165 835 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 ERBINQ96RT1 1412 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 A2MP01023 1474 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 RTF1Q92541 710 aaKnown RBP6.76□□□□□ -1.33
PHF3-210ENST00000509876 TNRQ92752 1358 aa6.76□□□□□ -1.33
PHF3-210ENST00000509876 DUOX2Q9NRD8 1548 aa6.75□□□□□ -1.33
PHF3-210ENST00000509876 SAMD9Q5K651 1589 aa6.75□□□□□ -1.33
PHF3-210ENST00000509876 GPRASP1Q5JY77 1395 aa6.75□□□□□ -1.33
PHF3-210ENST00000509876 CNTLNQ9NXG0 1405 aa6.75□□□□□ -1.33
PHF3-210ENST00000509876 COG3Q96JB2 828 aa6.75□□□□□ -1.33
PHF3-210ENST00000509876 CENPJQ9HC77 1338 aaPredicted RBP6.75□□□□□ -1.33
PHF3-210ENST00000509876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.75□□□□□ -1.331e-6■■□□□ 11.8
PHF3-210ENST00000509876 PHF23Q9BUL5 403 aaPredicted RBP6.75□□□□□ -1.33
PHF3-210ENST00000509876 FAM135AQ9P2D6 1515 aa6.74□□□□□ -1.33
PHF3-210ENST00000509876 ANKRD30BQ9BXX2 1392 aa6.74□□□□□ -1.33
PHF3-210ENST00000509876 KDM5BQ9UGL1 1544 aa6.74□□□□□ -1.33
PHF3-210ENST00000509876 ATP10AO60312 1499 aa6.74□□□□□ -1.33
PHF3-210ENST00000509876 CEBPAP49715 358 aaPredicted RBP6.74□□□□□ -1.33
PHF3-210ENST00000509876 LAS1LQ9Y4W2 734 aaKnown RBP6.74□□□□□ -1.33
PHF3-210ENST00000509876 MYH16Q9H6N6 1097 aa6.73□□□□□ -1.33
PHF3-210ENST00000509876 CFAP43Q8NDM7 1665 aa6.73□□□□□ -1.33
PHF3-210ENST00000509876 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
PHF3-210ENST00000509876 ESCO1Q5FWF5 840 aa6.73□□□□□ -1.33
PHF3-210ENST00000509876 ZFYVE16Q7Z3T8 1539 aa6.73□□□□□ -1.33
PHF3-210ENST00000509876 RTEL1-TNFRSF6BF6WH68 1400 aa6.72□□□□□ -1.33
PHF3-210ENST00000509876 CGNL1Q0VF96 1302 aa6.72□□□□□ -1.33
PHF3-210ENST00000509876 ABCA8O94911 1581 aa6.72□□□□□ -1.33
PHF3-210ENST00000509876 RALBP1Q15311 655 aa6.72□□□□□ -1.33
PHF3-210ENST00000509876 CALD1Q05682 793 aaKnown RBP6.71□□□□□ -1.33
PHF3-210ENST00000509876 ZCCHC11Q5TAX3 1644 aaKnown RBP6.71□□□□□ -1.33
PHF3-210ENST00000509876 USP47Q96K76 1375 aa6.71□□□□□ -1.34
PHF3-210ENST00000509876 TRAPPC8Q9Y2L5 1435 aa6.71□□□□□ -1.34
PHF3-210ENST00000509876 NEUROD2Q15784 382 aa6.71□□□□□ -1.34
PHF3-210ENST00000509876 SLC26A8Q96RN1 970 aa6.71□□□□□ -1.34
PHF3-210ENST00000509876 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
PHF3-210ENST00000509876 ST20-MTHFSA0A0A6YYL1 179 aa6.7□□□□□ -1.34
PHF3-210ENST00000509876 FBXO31Q5XUX0 539 aaPredicted RBP6.7□□□□□ -1.34
PHF3-210ENST00000509876 TMEM132EQ6IEE7 984 aa6.7□□□□□ -1.34
PHF3-210ENST00000509876 NCOA1Q15788 1441 aa6.7□□□□□ -1.34
PHF3-210ENST00000509876 LTV1Q96GA3 475 aaPredicted RBP6.7□□□□□ -1.34
PHF3-210ENST00000509876 UHRF1BP1Q6BDS2 1440 aa6.7□□□□□ -1.34
PHF3-210ENST00000509876 SHANK2Q9UPX8 1470 aa6.7□□□□□ -1.34
PHF3-210ENST00000509876 CLASP1Q7Z460 1538 aa6.7□□□□□ -1.34
PHF3-210ENST00000509876 RIMBP3CA6NJZ7 1639 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 RIMBP3BA6NNM3 1639 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 RIMBP3Q9UFD9 1639 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 PRAM1Q96QH2 718 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 MYO5CQ9NQX4 1742 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 ATP7AQ04656 1500 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 U2AF1L5P0DN76 240 aaPredicted RBP6.69□□□□□ -1.34
PHF3-210ENST00000509876 U2AF1Q01081 240 aaKnown RBP eCLIP6.69□□□□□ -1.34
PHF3-210ENST00000509876 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
PHF3-210ENST00000509876 NAIPQ13075 1403 aa6.68□□□□□ -1.34
PHF3-210ENST00000509876 C1orf141Q5JVX7 400 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms