RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
DDX41-210ENST00000509576 PZPP20742 1482 aa21.55■■□□□ 1.04
DDX41-210ENST00000509576 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
DDX41-210ENST00000509576 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
DDX41-210ENST00000509576 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
DDX41-210ENST00000509576 RNF17Q9BXT8 1623 aaKnown RBP21.54■■□□□ 1.04
DDX41-210ENST00000509576 SPATA31D1Q6ZQQ2 1576 aa21.53■■□□□ 1.04
DDX41-210ENST00000509576 KIF3BO15066 747 aa21.53■■□□□ 1.04
DDX41-210ENST00000509576 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
DDX41-210ENST00000509576 MAST1Q9Y2H9 1570 aa21.52■■□□□ 1.04
DDX41-210ENST00000509576 DISP3Q9P2K9 1392 aa21.51■■□□□ 1.03
DDX41-210ENST00000509576 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
DDX41-210ENST00000509576 VPS8Q8N3P4 1428 aa21.51■■□□□ 1.03
DDX41-210ENST00000509576 PKD2Q13563 968 aa21.5■■□□□ 1.03
DDX41-210ENST00000509576 TNRQ92752 1358 aa21.49■■□□□ 1.03
DDX41-210ENST00000509576 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
DDX41-210ENST00000509576 CFAP65Q6ZU64 1925 aaKnown RBP21.48■■□□□ 1.03
DDX41-210ENST00000509576 CEP152O94986 1710 aa21.48■■□□□ 1.03
DDX41-210ENST00000509576 STRCP1A6NGW2 1772 aa21.47■■□□□ 1.03
DDX41-210ENST00000509576 ABCC3O15438 1527 aa21.47■■□□□ 1.03
DDX41-210ENST00000509576 VWDEQ8N2E2 1590 aa21.46■■□□□ 1.03
DDX41-210ENST00000509576 ALKQ9UM73 1620 aa21.45■■□□□ 1.02
DDX41-210ENST00000509576 EIF2AK4Q9P2K8 1649 aaKnown RBP21.44■■□□□ 1.02
DDX41-210ENST00000509576 ZC3H13Q5T200 1668 aaKnown RBP21.44■■□□□ 1.02
DDX41-210ENST00000509576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.02
DDX41-210ENST00000509576 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
DDX41-210ENST00000509576 CROCC2H7BZ55 1655 aa21.42■■□□□ 1.02
DDX41-210ENST00000509576 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
DDX41-210ENST00000509576 DEPDC5O75140 1603 aa21.41■■□□□ 1.02
DDX41-210ENST00000509576 UGGT1Q9NYU2 1555 aa21.41■■□□□ 1.02
DDX41-210ENST00000509576 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
DDX41-210ENST00000509576 RSPH4AQ5TD94 716 aa21.41■■□□□ 1.02
DDX41-210ENST00000509576 NLRP1Q9C000 1473 aa21.39■■□□□ 1.02
DDX41-210ENST00000509576 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.02
DDX41-210ENST00000509576 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
DDX41-210ENST00000509576 MED14O60244 1454 aa21.39■■□□□ 1.01
DDX41-210ENST00000509576 SHANK2Q9UPX8 1470 aa21.39■■□□□ 1.01
DDX41-210ENST00000509576 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
DDX41-210ENST00000509576 IQGAP1P46940 1657 aa21.38■■□□□ 1.01
DDX41-210ENST00000509576 ERVK-7P63135 1459 aa21.38■■□□□ 1.01
DDX41-210ENST00000509576 CPS1P31327 1500 aa21.35■■□□□ 1.01
DDX41-210ENST00000509576 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1.01
DDX41-210ENST00000509576 TSPY4P0CV99 314 aa21.33■■□□□ 1.01
DDX41-210ENST00000509576 TSPY10P0CW01 314 aa21.33■■□□□ 1.01
DDX41-210ENST00000509576 SOCS7O14512 581 aa21.32■■□□□ 1
DDX41-210ENST00000509576 PRDM15P57071 1507 aaPredicted RBP21.32■■□□□ 1
DDX41-210ENST00000509576 DUOX2Q9NRD8 1548 aa21.32■■□□□ 1
DDX41-210ENST00000509576 PTPN23Q9H3S7 1636 aa21.32■■□□□ 1
DDX41-210ENST00000509576 ABCC5O15440 1437 aa21.31■■□□□ 1
DDX41-210ENST00000509576 XIRP1Q702N8 1843 aaKnown RBP21.3■■□□□ 1
DDX41-210ENST00000509576 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
DDX41-210ENST00000509576 HSPA1LP34931 641 aa21.27■■□□□ 1
DDX41-210ENST00000509576 THEMISQ8N1K5 641 aaPredicted RBP21.27■■□□□ 1
DDX41-210ENST00000509576 MED1Q15648 1581 aaPredicted RBP21.26■□□□□ 0.99
DDX41-210ENST00000509576 PIK3C2BO00750 1634 aa21.26■□□□□ 0.99
DDX41-210ENST00000509576 LRRC7Q96NW7 1537 aa21.25■□□□□ 0.99
DDX41-210ENST00000509576 ARHGAP23Q9P227 1491 aa21.25■□□□□ 0.99
DDX41-210ENST00000509576 KIF15Q9NS87 1388 aa21.24■□□□□ 0.99
DDX41-210ENST00000509576 DAPK1P53355 1430 aa21.23■□□□□ 0.99
DDX41-210ENST00000509576 PIP4K2BP78356 416 aa21.23■□□□□ 0.99
DDX41-210ENST00000509576 SLIT1O75093 1534 aa21.22■□□□□ 0.99
DDX41-210ENST00000509576 SYNMO15061 1565 aa21.22■□□□□ 0.99
DDX41-210ENST00000509576 ARHGAP31Q2M1Z3 1444 aa21.21■□□□□ 0.99
DDX41-210ENST00000509576 ERBINQ96RT1 1412 aa21.21■□□□□ 0.99
DDX41-210ENST00000509576 LTKP29376 864 aa21.2■□□□□ 0.98
DDX41-210ENST00000509576 FGD6Q6ZV73 1430 aa21.2■□□□□ 0.98
DDX41-210ENST00000509576 SCAF11Q99590 1463 aaKnown RBP21.2■□□□□ 0.98
DDX41-210ENST00000509576 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
DDX41-210ENST00000509576 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
DDX41-210ENST00000509576 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
DDX41-210ENST00000509576 TOM1O60784 492 aa21.14■□□□□ 0.97
DDX41-210ENST00000509576 KDM5AP29375 1690 aaKnown RBP21.14■□□□□ 0.97
DDX41-210ENST00000509576 MYO5BQ9ULV0 1848 aa21.13■□□□□ 0.97
DDX41-210ENST00000509576 EFCAB6Q5THR3 1501 aa21.11■□□□□ 0.97
DDX41-210ENST00000509576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.973e-8■■■□□ 15.2
DDX41-210ENST00000509576 CHIC2Q9UKJ5 165 aa21.1■□□□□ 0.97
DDX41-210ENST00000509576 TET3O43151 1660 aa21.09■□□□□ 0.97
DDX41-210ENST00000509576 ADGRL2O95490 1459 aa21.09■□□□□ 0.97
DDX41-210ENST00000509576 NOS1P29475 1434 aa21.08■□□□□ 0.97
DDX41-210ENST00000509576 TXNDC2Q86VQ3 553 aa21.08■□□□□ 0.97
DDX41-210ENST00000509576 TMEM2Q9UHN6 1383 aa21.08■□□□□ 0.96
DDX41-210ENST00000509576 IDI1Q13907 227 aa21.06■□□□□ 0.96
DDX41-210ENST00000509576 ADGRB3O60242 1522 aa21.05■□□□□ 0.96
DDX41-210ENST00000509576 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
DDX41-210ENST00000509576 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
DDX41-210ENST00000509576 GCC2Q8IWJ2 1684 aa21.02■□□□□ 0.96
DDX41-210ENST00000509576 NWD1Q149M9 1564 aa21.01■□□□□ 0.95
DDX41-210ENST00000509576 KANK1Q14678 1352 aa20.99■□□□□ 0.95
DDX41-210ENST00000509576 UNC13BO14795 1591 aa20.98■□□□□ 0.95
DDX41-210ENST00000509576 TMEM131LA2VDJ0 1609 aa20.97■□□□□ 0.95
DDX41-210ENST00000509576 E9PCH4 1651 aa20.97■□□□□ 0.95
DDX41-210ENST00000509576 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
DDX41-210ENST00000509576 ZFYVE9O95405 1425 aa20.96■□□□□ 0.95
DDX41-210ENST00000509576 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
DDX41-210ENST00000509576 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
DDX41-210ENST00000509576 TMEM94Q12767 1356 aa20.96■□□□□ 0.95
DDX41-210ENST00000509576 APLP2Q06481 763 aa20.95■□□□□ 0.94
DDX41-210ENST00000509576 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
DDX41-210ENST00000509576 RGS17Q9UGC6 210 aaPredicted RBP20.95■□□□□ 0.94
DDX41-210ENST00000509576 ANKRD50Q9ULJ7 1429 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms