RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 FCHSD2O94868 740 aa11.84□□□□□ -0.51
GYPA-205ENST00000508337 C6orf132Q5T0Z8 1188 aa11.84□□□□□ -0.51
GYPA-205ENST00000508337 ZNF687Q8N1G0 1237 aa11.83□□□□□ -0.52
GYPA-205ENST00000508337 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
GYPA-205ENST00000508337 POTEMA6NI47 508 aa11.82□□□□□ -0.52
GYPA-205ENST00000508337 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
GYPA-205ENST00000508337 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
GYPA-205ENST00000508337 PPP1R3GB7ZBB8 358 aa11.81□□□□□ -0.52
GYPA-205ENST00000508337 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
GYPA-205ENST00000508337 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
GYPA-205ENST00000508337 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
GYPA-205ENST00000508337 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
GYPA-205ENST00000508337 PSEN2P49810 448 aa11.77□□□□□ -0.53
GYPA-205ENST00000508337 HIC1Q14526 733 aa11.76□□□□□ -0.53
GYPA-205ENST00000508337 PTGDRQ13258 359 aa11.75□□□□□ -0.53
GYPA-205ENST00000508337 KRI1Q8N9T8 703 aaKnown RBP11.75□□□□□ -0.53
GYPA-205ENST00000508337 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
GYPA-205ENST00000508337 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
GYPA-205ENST00000508337 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
GYPA-205ENST00000508337 GNPATO15228 680 aa11.73□□□□□ -0.53
GYPA-205ENST00000508337 COL9A1P20849 921 aa11.73□□□□□ -0.53
GYPA-205ENST00000508337 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
GYPA-205ENST00000508337 PRSS12P56730 875 aa11.71□□□□□ -0.53
GYPA-205ENST00000508337 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
GYPA-205ENST00000508337 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
GYPA-205ENST00000508337 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
GYPA-205ENST00000508337 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
GYPA-205ENST00000508337 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
GYPA-205ENST00000508337 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
GYPA-205ENST00000508337 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
GYPA-205ENST00000508337 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
GYPA-205ENST00000508337 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
GYPA-205ENST00000508337 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
GYPA-205ENST00000508337 PROX2Q3B8N5 592 aa11.68□□□□□ -0.54
GYPA-205ENST00000508337 ZBED2Q9BTP6 218 aa11.67□□□□□ -0.54
GYPA-205ENST00000508337 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
GYPA-205ENST00000508337 GPR37O15354 613 aa11.66□□□□□ -0.54
GYPA-205ENST00000508337 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
GYPA-205ENST00000508337 NPDC1Q9NQX5 325 aaPredicted RBP11.66□□□□□ -0.54
GYPA-205ENST00000508337 MAP2K5Q13163 448 aa11.65□□□□□ -0.54
GYPA-205ENST00000508337 TK2O00142 265 aa11.63□□□□□ -0.55
GYPA-205ENST00000508337 ZMYND10O75800 440 aa11.63□□□□□ -0.55
GYPA-205ENST00000508337 ADGRD1Q6QNK2 874 aa11.63□□□□□ -0.55
GYPA-205ENST00000508337 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
GYPA-205ENST00000508337 GOLGA8CPA6NN73 597 aa11.62□□□□□ -0.55
GYPA-205ENST00000508337 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
GYPA-205ENST00000508337 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
GYPA-205ENST00000508337 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
GYPA-205ENST00000508337 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
GYPA-205ENST00000508337 VPS9D1Q9Y2B5 631 aa11.62□□□□□ -0.55
GYPA-205ENST00000508337 ONECUT3O60422 494 aaPredicted RBP11.61□□□□□ -0.55
GYPA-205ENST00000508337 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
GYPA-205ENST00000508337 TSKSQ9UJT2 592 aa11.61□□□□□ -0.55
GYPA-205ENST00000508337 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
GYPA-205ENST00000508337 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
GYPA-205ENST00000508337 OATP04181 439 aa11.59□□□□□ -0.55
GYPA-205ENST00000508337 FECHP22830 423 aa11.59□□□□□ -0.55
GYPA-205ENST00000508337 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
GYPA-205ENST00000508337 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
GYPA-205ENST00000508337 PCDH10Q9P2E7 1040 aa11.59□□□□□ -0.55
GYPA-205ENST00000508337 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
GYPA-205ENST00000508337 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
GYPA-205ENST00000508337 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
GYPA-205ENST00000508337 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
GYPA-205ENST00000508337 TATDN2Q93075 761 aa11.57□□□□□ -0.56
GYPA-205ENST00000508337 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
GYPA-205ENST00000508337 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
GYPA-205ENST00000508337 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
GYPA-205ENST00000508337 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
GYPA-205ENST00000508337 AK7Q96M32 723 aa11.56□□□□□ -0.56
GYPA-205ENST00000508337 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
GYPA-205ENST00000508337 SMAPO00193 183 aa11.55□□□□□ -0.56
GYPA-205ENST00000508337 IRF6O14896 467 aa11.55□□□□□ -0.56
GYPA-205ENST00000508337 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
GYPA-205ENST00000508337 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
GYPA-205ENST00000508337 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
GYPA-205ENST00000508337 RNF40O75150 1001 aa11.52□□□□□ -0.57
GYPA-205ENST00000508337 TTLL12Q14166 644 aaPredicted RBP11.52□□□□□ -0.57
GYPA-205ENST00000508337 LAPTM4BQ86VI4 370 aa11.52□□□□□ -0.57
GYPA-205ENST00000508337 DNAJB2P25686 324 aa11.51□□□□□ -0.57
GYPA-205ENST00000508337 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
GYPA-205ENST00000508337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
GYPA-205ENST00000508337 ANKK1Q8NFD2 765 aa11.49□□□□□ -0.57
GYPA-205ENST00000508337 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
GYPA-205ENST00000508337 RCCD1A6NED2 376 aa11.47□□□□□ -0.57
GYPA-205ENST00000508337 HRO43593 1189 aa11.47□□□□□ -0.57
GYPA-205ENST00000508337 WNT2BQ93097 391 aa11.46□□□□□ -0.57
GYPA-205ENST00000508337 LRCH3Q96II8 777 aa11.46□□□□□ -0.57
GYPA-205ENST00000508337 BHMG1C9JSJ3 638 aaPredicted RBP11.45□□□□□ -0.58
GYPA-205ENST00000508337 CLCN1P35523 988 aa11.45□□□□□ -0.58
GYPA-205ENST00000508337 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
GYPA-205ENST00000508337 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
GYPA-205ENST00000508337 EYA1Q99502 592 aa11.45□□□□□ -0.58
GYPA-205ENST00000508337 TRIM66O15016 1216 aa11.44□□□□□ -0.58
GYPA-205ENST00000508337 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
GYPA-205ENST00000508337 RSPH4AQ5TD94 716 aa11.43□□□□□ -0.58
GYPA-205ENST00000508337 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.43□□□□□ -0.58
GYPA-205ENST00000508337 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms