RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
DDR1-262ENST00000508312 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
DDR1-262ENST00000508312 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
DDR1-262ENST00000508312 ATP10BO94823 1461 aa16.83■□□□□ 0.28
DDR1-262ENST00000508312 NBPF1Q3BBV0 1214 aa16.81■□□□□ 0.28
DDR1-262ENST00000508312 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
DDR1-262ENST00000508312 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
DDR1-262ENST00000508312 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
DDR1-262ENST00000508312 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
DDR1-262ENST00000508312 KIAA1107Q9UPP5 1409 aa16.8■□□□□ 0.28
DDR1-262ENST00000508312 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
DDR1-262ENST00000508312 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
DDR1-262ENST00000508312 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
DDR1-262ENST00000508312 RSPH6AQ9H0K4 717 aa16.79■□□□□ 0.28
DDR1-262ENST00000508312 PTPRGP23470 1445 aa16.79■□□□□ 0.28
DDR1-262ENST00000508312 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
DDR1-262ENST00000508312 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
DDR1-262ENST00000508312 BACH2Q9BYV9 841 aa16.77■□□□□ 0.27
DDR1-262ENST00000508312 NUP160Q12769 1436 aa16.77■□□□□ 0.27
DDR1-262ENST00000508312 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
DDR1-262ENST00000508312 DDRGK1Q96HY6 314 aa16.75■□□□□ 0.27
DDR1-262ENST00000508312 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
DDR1-262ENST00000508312 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
DDR1-262ENST00000508312 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
DDR1-262ENST00000508312 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
DDR1-262ENST00000508312 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
DDR1-262ENST00000508312 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
DDR1-262ENST00000508312 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
DDR1-262ENST00000508312 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
DDR1-262ENST00000508312 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
DDR1-262ENST00000508312 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
DDR1-262ENST00000508312 ARXQ96QS3 562 aa16.68■□□□□ 0.26
DDR1-262ENST00000508312 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
DDR1-262ENST00000508312 CHD1O14646 1710 aa16.68■□□□□ 0.26
DDR1-262ENST00000508312 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
DDR1-262ENST00000508312 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
DDR1-262ENST00000508312 CDC42BPAQ5VT25 1732 aa16.66■□□□□ 0.26
DDR1-262ENST00000508312 MS4A1P11836 297 aa16.65■□□□□ 0.26
DDR1-262ENST00000508312 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
DDR1-262ENST00000508312 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
DDR1-262ENST00000508312 MBD5Q9P267 1494 aa16.64■□□□□ 0.25
DDR1-262ENST00000508312 ITSN2Q9NZM3 1697 aa16.64■□□□□ 0.25
DDR1-262ENST00000508312 ABCA8O94911 1581 aa16.63■□□□□ 0.25
DDR1-262ENST00000508312 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
DDR1-262ENST00000508312 PLIN1O60240 522 aa16.63■□□□□ 0.25
DDR1-262ENST00000508312 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
DDR1-262ENST00000508312 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
DDR1-262ENST00000508312 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
DDR1-262ENST00000508312 PLEKHH2Q8IVE3 1493 aa16.62■□□□□ 0.25
DDR1-262ENST00000508312 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
DDR1-262ENST00000508312 ZMYND15Q9H091 742 aa16.61■□□□□ 0.25
DDR1-262ENST00000508312 NAP1L5Q96NT1 182 aaPredicted RBP16.61■□□□□ 0.25
DDR1-262ENST00000508312 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
DDR1-262ENST00000508312 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
DDR1-262ENST00000508312 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
DDR1-262ENST00000508312 PANK3Q9H999 370 aa16.57■□□□□ 0.24
DDR1-262ENST00000508312 PODXL2Q9NZ53 605 aa16.57■□□□□ 0.24
DDR1-262ENST00000508312 KDM5CP41229 1560 aa16.57■□□□□ 0.24
DDR1-262ENST00000508312 CROCC2H7BZ55 1655 aa16.56■□□□□ 0.24
DDR1-262ENST00000508312 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
DDR1-262ENST00000508312 CCDC141Q6ZP82 1450 aa16.56■□□□□ 0.24
DDR1-262ENST00000508312 FAM135AQ9P2D6 1515 aa16.56■□□□□ 0.24
DDR1-262ENST00000508312 TTC37Q6PGP7 1564 aa16.55■□□□□ 0.24
DDR1-262ENST00000508312 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
DDR1-262ENST00000508312 RRAGDQ9NQL2 400 aaPredicted RBP16.54■□□□□ 0.24
DDR1-262ENST00000508312 ADCY10Q96PN6 1610 aa16.54■□□□□ 0.24
DDR1-262ENST00000508312 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
DDR1-262ENST00000508312 HSP90AA2PQ14568 343 aaPredicted RBP16.52■□□□□ 0.24
DDR1-262ENST00000508312 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
DDR1-262ENST00000508312 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
DDR1-262ENST00000508312 MYBBP1AQ9BQG0 1328 aaKnown RBP16.51■□□□□ 0.23
DDR1-262ENST00000508312 POGKQ9P215 609 aa16.51■□□□□ 0.23
DDR1-262ENST00000508312 SHROOM2Q13796 1616 aa16.51■□□□□ 0.23
DDR1-262ENST00000508312 CDC42BPBQ9Y5S2 1711 aa16.51■□□□□ 0.23
DDR1-262ENST00000508312 RGS3P49796 1198 aa16.5■□□□□ 0.23
DDR1-262ENST00000508312 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
DDR1-262ENST00000508312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.239e-7■■■□□ 17.5
DDR1-262ENST00000508312 TESK2Q96S53 571 aa16.49■□□□□ 0.23
DDR1-262ENST00000508312 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
DDR1-262ENST00000508312 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
DDR1-262ENST00000508312 A2MP01023 1474 aa16.49■□□□□ 0.23
DDR1-262ENST00000508312 UHRF1BP1Q6BDS2 1440 aa16.48■□□□□ 0.23
DDR1-262ENST00000508312 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
DDR1-262ENST00000508312 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
DDR1-262ENST00000508312 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
DDR1-262ENST00000508312 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
DDR1-262ENST00000508312 KIF3BO15066 747 aa16.47■□□□□ 0.23
DDR1-262ENST00000508312 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
DDR1-262ENST00000508312 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
DDR1-262ENST00000508312 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
DDR1-262ENST00000508312 KTN1Q86UP2 1357 aaKnown RBP16.46■□□□□ 0.23
DDR1-262ENST00000508312 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
DDR1-262ENST00000508312 SLKQ9H2G2 1235 aaPredicted RBP16.45■□□□□ 0.22
DDR1-262ENST00000508312 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
DDR1-262ENST00000508312 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
DDR1-262ENST00000508312 POLR1AO95602 1720 aaPredicted RBP16.44■□□□□ 0.22
DDR1-262ENST00000508312 KDM5DQ9BY66 1539 aa16.44■□□□□ 0.22
DDR1-262ENST00000508312 FAM161AQ3B820 660 aa16.44■□□□□ 0.22
DDR1-262ENST00000508312 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
DDR1-262ENST00000508312 RALBP1Q15311 655 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms