RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
AFP-203ENST00000506820 GOLGA8CPA6NN73 597 aa8.82□□□□□ -1
AFP-203ENST00000506820 PPP1R3GB7ZBB8 358 aa8.82□□□□□ -1
AFP-203ENST00000506820 NBPF3Q9H094 633 aa8.81□□□□□ -1
AFP-203ENST00000506820 HRO43593 1189 aa8.8□□□□□ -1
AFP-203ENST00000506820 NBR1Q14596 966 aa8.8□□□□□ -1
AFP-203ENST00000506820 C6orf132Q5T0Z8 1188 aa8.8□□□□□ -1
AFP-203ENST00000506820 P3H3Q8IVL6 736 aa8.8□□□□□ -1
AFP-203ENST00000506820 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
AFP-203ENST00000506820 ARHGEF1Q92888 912 aaKnown RBP8.79□□□□□ -1
AFP-203ENST00000506820 RBM33Q96EV2 1170 aaKnown RBP8.79□□□□□ -1
AFP-203ENST00000506820 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
AFP-203ENST00000506820 HCSTQ9UBK5 93 aa8.79□□□□□ -1
AFP-203ENST00000506820 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
AFP-203ENST00000506820 MAP3K7O43318 606 aa8.78□□□□□ -1
AFP-203ENST00000506820 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
AFP-203ENST00000506820 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
AFP-203ENST00000506820 EN1Q05925 392 aaPredicted RBP8.75□□□□□ -1.01
AFP-203ENST00000506820 CERKQ8TCT0 537 aa8.75□□□□□ -1.01
AFP-203ENST00000506820 RABGEF1Q9UJ41 708 aa8.75□□□□□ -1.01
AFP-203ENST00000506820 KCTD12Q96CX2 325 aaKnown RBP8.74□□□□□ -1.01
AFP-203ENST00000506820 BHMG1C9JSJ3 638 aaPredicted RBP8.73□□□□□ -1.01
AFP-203ENST00000506820 COL9A1P20849 921 aa8.73□□□□□ -1.01
AFP-203ENST00000506820 LAPTM4BQ86VI4 370 aa8.71□□□□□ -1.02
AFP-203ENST00000506820 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
AFP-203ENST00000506820 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
AFP-203ENST00000506820 WNT2BQ93097 391 aa8.71□□□□□ -1.02
AFP-203ENST00000506820 PROX2Q3B8N5 592 aa8.7□□□□□ -1.02
AFP-203ENST00000506820 KIAA1468Q9P260 1216 aa8.7□□□□□ -1.02
AFP-203ENST00000506820 TRIM6-TRIM34B2RNG4 842 aa8.69□□□□□ -1.02
AFP-203ENST00000506820 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
AFP-203ENST00000506820 PTPN5P54829 565 aa8.68□□□□□ -1.02
AFP-203ENST00000506820 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
AFP-203ENST00000506820 OSBPP22059 807 aa8.67□□□□□ -1.02
AFP-203ENST00000506820 PRSS12P56730 875 aa8.65□□□□□ -1.02
AFP-203ENST00000506820 SMYD5Q6GMV2 418 aa8.65□□□□□ -1.02
AFP-203ENST00000506820 CDCA7LQ96GN5 454 aa8.65□□□□□ -1.02
AFP-203ENST00000506820 HDGFP51858 240 aaKnown RBP8.64□□□□□ -1.03
AFP-203ENST00000506820 FAM98CQ17RN3 349 aaKnown RBP8.64□□□□□ -1.03
AFP-203ENST00000506820 THSD4Q6ZMP0 1018 aa8.64□□□□□ -1.03
AFP-203ENST00000506820 ZFRQ96KR1 1074 aaKnown RBP8.63□□□□□ -1.03
AFP-203ENST00000506820 NBPF26B4DH59 902 aa8.62□□□□□ -1.03
AFP-203ENST00000506820 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
AFP-203ENST00000506820 PLA2G2EQ9NZK7 142 aa8.61□□□□□ -1.03
AFP-203ENST00000506820 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
AFP-203ENST00000506820 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
AFP-203ENST00000506820 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
AFP-203ENST00000506820 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
AFP-203ENST00000506820 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
AFP-203ENST00000506820 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
AFP-203ENST00000506820 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
AFP-203ENST00000506820 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
AFP-203ENST00000506820 NUTM2FA1L443 756 aa8.58□□□□□ -1.04
AFP-203ENST00000506820 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
AFP-203ENST00000506820 TATDN2Q93075 761 aa8.58□□□□□ -1.04
AFP-203ENST00000506820 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
AFP-203ENST00000506820 SEMA3EO15041 775 aa8.57□□□□□ -1.04
AFP-203ENST00000506820 PRIM1P49642 420 aaKnown RBP8.57□□□□□ -1.04
AFP-203ENST00000506820 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
AFP-203ENST00000506820 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
AFP-203ENST00000506820 BCAMP50895 628 aa8.55□□□□□ -1.04
AFP-203ENST00000506820 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
AFP-203ENST00000506820 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
AFP-203ENST00000506820 TSR3Q9UJK0 312 aaKnown RBP8.55□□□□□ -1.04
AFP-203ENST00000506820 PPP4CP60510 307 aa8.54□□□□□ -1.04
AFP-203ENST00000506820 SMAPO00193 183 aa8.53□□□□□ -1.04
AFP-203ENST00000506820 FCHSD2O94868 740 aa8.53□□□□□ -1.04
AFP-203ENST00000506820 NPDC1Q9NQX5 325 aaPredicted RBP8.53□□□□□ -1.04
AFP-203ENST00000506820 PTGDRQ13258 359 aa8.52□□□□□ -1.05
AFP-203ENST00000506820 PADI6Q6TGC4 694 aa8.52□□□□□ -1.05
AFP-203ENST00000506820 HPS5Q9UPZ3 1129 aa8.52□□□□□ -1.05
AFP-203ENST00000506820 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
AFP-203ENST00000506820 TESPA1A2RU30 521 aaPredicted RBP8.51□□□□□ -1.05
AFP-203ENST00000506820 SAMD7Q7Z3H4 446 aa8.5□□□□□ -1.05
AFP-203ENST00000506820 TTC13Q8NBP0 860 aa8.5□□□□□ -1.05
AFP-203ENST00000506820 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
AFP-203ENST00000506820 WBP1LQ9NX94 342 aa8.5□□□□□ -1.05
AFP-203ENST00000506820 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
AFP-203ENST00000506820 RNF40O75150 1001 aa8.49□□□□□ -1.05
AFP-203ENST00000506820 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
AFP-203ENST00000506820 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
AFP-203ENST00000506820 HIC1Q14526 733 aa8.46□□□□□ -1.06
AFP-203ENST00000506820 OATP04181 439 aa8.45□□□□□ -1.06
AFP-203ENST00000506820 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
AFP-203ENST00000506820 DNAJB2P25686 324 aa8.44□□□□□ -1.06
AFP-203ENST00000506820 KCNC4Q03721 635 aa8.44□□□□□ -1.06
AFP-203ENST00000506820 EYA1Q99502 592 aa8.44□□□□□ -1.06
AFP-203ENST00000506820 PRR14Q9BWN1 585 aa8.44□□□□□ -1.06
AFP-203ENST00000506820 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
AFP-203ENST00000506820 SWT1Q5T5J6 900 aaKnown RBP8.43□□□□□ -1.06
AFP-203ENST00000506820 RSPH4AQ5TD94 716 aa8.43□□□□□ -1.06
AFP-203ENST00000506820 C3orf80F5H4A9 247 aa8.42□□□□□ -1.06
AFP-203ENST00000506820 ADGRG1Q9Y653 693 aa8.42□□□□□ -1.06
AFP-203ENST00000506820 GNPATO15228 680 aa8.41□□□□□ -1.06
AFP-203ENST00000506820 GPIHBP1Q8IV16 184 aa8.41□□□□□ -1.06
AFP-203ENST00000506820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
AFP-203ENST00000506820 RGS20O76081 388 aa8.4□□□□□ -1.06
AFP-203ENST00000506820 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
AFP-203ENST00000506820 A0A0G2JS52 829 aa8.37□□□□□ -1.07
AFP-203ENST00000506820 TMEM134Q9H6X4 195 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms