RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 PPARGC1BQ86YN6 1023 aaKnown RBP34.84■■■■□ 3.17
HMGB2-204ENST00000506267 FAM135AQ9P2D6 1515 aa34.84■■■■□ 3.17
HMGB2-204ENST00000506267 KIF15Q9NS87 1388 aa34.84■■■■□ 3.17
HMGB2-204ENST00000506267 UHRF1BP1Q6BDS2 1440 aa34.83■■■■□ 3.17
HMGB2-204ENST00000506267 PTPRKQ15262 1439 aa34.82■■■■□ 3.17
HMGB2-204ENST00000506267 FAM50AQ14320 339 aaKnown RBP34.82■■■■□ 3.16
HMGB2-204ENST00000506267 KDM5DQ9BY66 1539 aa34.81■■■■□ 3.16
HMGB2-204ENST00000506267 RRP7BPQ9NSQ0 103 aa34.81■■■■□ 3.16
HMGB2-204ENST00000506267 MROH1Q8NDA8 1641 aa34.78■■■■□ 3.16
HMGB2-204ENST00000506267 CHIC2Q9UKJ5 165 aa34.78■■■■□ 3.16
HMGB2-204ENST00000506267 NCOA1Q15788 1441 aa34.77■■■■□ 3.16
HMGB2-204ENST00000506267 ADGRL2O95490 1459 aa34.76■■■■□ 3.15
HMGB2-204ENST00000506267 WASHC2CQ9Y4E1 1318 aa34.76■■■■□ 3.15
HMGB2-204ENST00000506267 ANKRD30AQ9BXX3 1397 aa34.75■■■■□ 3.15
HMGB2-204ENST00000506267 ERBINQ96RT1 1412 aa34.75■■■■□ 3.15
HMGB2-204ENST00000506267 ABCC3O15438 1527 aa34.71■■■■□ 3.15
HMGB2-204ENST00000506267 PZPP20742 1482 aa34.7■■■■□ 3.15
HMGB2-204ENST00000506267 ZC3H13Q5T200 1668 aaKnown RBP34.67■■■■□ 3.14
HMGB2-204ENST00000506267 FBXO31Q5XUX0 539 aaPredicted RBP34.66■■■■□ 3.14
HMGB2-204ENST00000506267 MYO3AQ8NEV4 1616 aa34.66■■■■□ 3.14
HMGB2-204ENST00000506267 STRCQ7RTU9 1775 aa34.65■■■■□ 3.14
HMGB2-204ENST00000506267 PRDM15P57071 1507 aaPredicted RBP34.65■■■■□ 3.14
HMGB2-204ENST00000506267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.64■■■■□ 3.149e-10■■■□□ 17.8
HMGB2-204ENST00000506267 DEPDC5O75140 1603 aa34.64■■■■□ 3.14
HMGB2-204ENST00000506267 ZNF142P52746 1687 aaPredicted RBP34.62■■■■□ 3.13
HMGB2-204ENST00000506267 CEP152O94986 1710 aa34.61■■■■□ 3.13
HMGB2-204ENST00000506267 CEP170BQ9Y4F5 1589 aaPredicted RBP34.58■■■■□ 3.13
HMGB2-204ENST00000506267 TNRQ92752 1358 aa34.57■■■■□ 3.12
HMGB2-204ENST00000506267 CAMSAP1Q5T5Y3 1602 aa34.56■■■■□ 3.12
HMGB2-204ENST00000506267 RRBP1Q9P2E9 1410 aaKnown RBP34.55■■■■□ 3.12
HMGB2-204ENST00000506267 ROCK1Q13464 1354 aa34.54■■■■□ 3.12
HMGB2-204ENST00000506267 VWDEQ8N2E2 1590 aa34.53■■■■□ 3.12
HMGB2-204ENST00000506267 ANKRD50Q9ULJ7 1429 aa34.53■■■■□ 3.12
HMGB2-204ENST00000506267 A2ML1A8K2U0 1454 aa34.52■■■■□ 3.12
HMGB2-204ENST00000506267 SPATA31D1Q6ZQQ2 1576 aa34.51■■■■□ 3.12
HMGB2-204ENST00000506267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.51■■■■□ 3.126e-13■■■□□ 14.7
HMGB2-204ENST00000506267 ARHGAP31Q2M1Z3 1444 aa34.49■■■■□ 3.11
HMGB2-204ENST00000506267 ERVK-7P63135 1459 aa34.48■■■■□ 3.11
HMGB2-204ENST00000506267 LMTK2Q8IWU2 1503 aa34.47■■■■□ 3.11
HMGB2-204ENST00000506267 CFAP65Q6ZU64 1925 aaKnown RBP34.47■■■■□ 3.11
HMGB2-204ENST00000506267 KANK1Q14678 1352 aa34.46■■■■□ 3.11
HMGB2-204ENST00000506267 ITGAEP38570 1179 aa34.45■■■■□ 3.11
HMGB2-204ENST00000506267 DMRT2Q9Y5R5 561 aa34.44■■■■□ 3.1
HMGB2-204ENST00000506267 PLA2R1Q13018 1463 aa34.44■■■■□ 3.1
HMGB2-204ENST00000506267 NLRP1Q9C000 1473 aa34.44■■■■□ 3.1
HMGB2-204ENST00000506267 PTPRTO14522 1441 aa34.43■■■■□ 3.1
HMGB2-204ENST00000506267 NCKAP5LQ9HCH0 1330 aa34.37■■■■□ 3.09
HMGB2-204ENST00000506267 UNC13BO14795 1591 aa34.36■■■■□ 3.09
HMGB2-204ENST00000506267 EFCAB6Q5THR3 1501 aa34.34■■■■□ 3.09
HMGB2-204ENST00000506267 UGGT1Q9NYU2 1555 aa34.33■■■■□ 3.09
HMGB2-204ENST00000506267 PKD2Q13563 968 aa34.33■■■■□ 3.09
HMGB2-204ENST00000506267 THEMISQ8N1K5 641 aaPredicted RBP34.28■■■■□ 3.08
HMGB2-204ENST00000506267 TET3O43151 1660 aa34.25■■■■□ 3.07
HMGB2-204ENST00000506267 NOS1P29475 1434 aa34.25■■■■□ 3.07
HMGB2-204ENST00000506267 ILDR1Q86SU0 546 aaPredicted RBP34.25■■■■□ 3.07
HMGB2-204ENST00000506267 UBR1Q8IWV7 1749 aa34.24■■■■□ 3.07
HMGB2-204ENST00000506267 POLR1AO95602 1720 aaPredicted RBP34.23■■■■□ 3.07
HMGB2-204ENST00000506267 SYNMO15061 1565 aa34.23■■■■□ 3.07
HMGB2-204ENST00000506267 NEURL4Q96JN8 1562 aa34.23■■■■□ 3.07
HMGB2-204ENST00000506267 IQGAP3Q86VI3 1631 aa34.22■■■■□ 3.07
HMGB2-204ENST00000506267 RPRD2Q5VT52 1461 aaKnown RBP34.21■■■■□ 3.07
HMGB2-204ENST00000506267 GCC2Q8IWJ2 1684 aa34.21■■■■□ 3.07
HMGB2-204ENST00000506267 NAIPQ13075 1403 aa34.21■■■■□ 3.07
HMGB2-204ENST00000506267 CERKQ8TCT0 537 aa34.18■■■■□ 3.06
HMGB2-204ENST00000506267 PIK3C2BO00750 1634 aa34.18■■■■□ 3.06
HMGB2-204ENST00000506267 ANKLE2Q86XL3 938 aa34.17■■■■□ 3.06
HMGB2-204ENST00000506267 LTBP4Q8N2S1 1624 aa34.17■■■■□ 3.06
HMGB2-204ENST00000506267 NUP155O75694 1391 aa34.16■■■■□ 3.06
HMGB2-204ENST00000506267 IDI1Q13907 227 aa34.15■■■■□ 3.06
HMGB2-204ENST00000506267 E9PCH4 1651 aa34.14■■■■□ 3.06
HMGB2-204ENST00000506267 MED14O60244 1454 aa34.14■■■■□ 3.06
HMGB2-204ENST00000506267 ARHGAP23Q9P227 1491 aa34.12■■■■□ 3.05
HMGB2-204ENST00000506267 HFM1A2PYH4 1435 aa34.12■■■■□ 3.05
HMGB2-204ENST00000506267 FBXO41Q8TF61 875 aa34.11■■■■□ 3.05
HMGB2-204ENST00000506267 KDM5AP29375 1690 aaKnown RBP34.11■■■■□ 3.05
HMGB2-204ENST00000506267 SLIT1O75093 1534 aa34.1■■■■□ 3.05
HMGB2-204ENST00000506267 SLC52A1Q9NWF4 448 aa34.08■■■■□ 3.05
HMGB2-204ENST00000506267 ZNF335Q9H4Z2 1342 aaPredicted RBP34.07■■■■□ 3.05
HMGB2-204ENST00000506267 NPHP4O75161 1426 aaPredicted RBP34.06■■■■□ 3.04
HMGB2-204ENST00000506267 LTKP29376 864 aa34.03■■■■□ 3.04
HMGB2-204ENST00000506267 TMEM2Q9UHN6 1383 aa34.02■■■■□ 3.04
HMGB2-204ENST00000506267 ADGRB3O60242 1522 aa34.02■■■■□ 3.04
HMGB2-204ENST00000506267 IQGAP1P46940 1657 aa34.02■■■■□ 3.04
HMGB2-204ENST00000506267 SCAF11Q99590 1463 aaKnown RBP34.01■■■■□ 3.04
HMGB2-204ENST00000506267 STAG3Q9UJ98 1225 aa33.99■■■■□ 3.03
HMGB2-204ENST00000506267 TXNDC2Q86VQ3 553 aa33.98■■■■□ 3.03
HMGB2-204ENST00000506267 MYO5BQ9ULV0 1848 aa33.94■■■■□ 3.02
HMGB2-204ENST00000506267 TMEM131LA2VDJ0 1609 aa33.93■■■■□ 3.02
HMGB2-204ENST00000506267 EID1Q9Y6B2 187 aa33.92■■■■□ 3.02
HMGB2-204ENST00000506267 IQSEC2Q5JU85 1478 aa33.92■■■■□ 3.02
HMGB2-204ENST00000506267 SPHKAPQ2M3C7 1700 aa33.88■■■■□ 3.01
HMGB2-204ENST00000506267 ZFYVE9O95405 1425 aa33.86■■■■□ 3.01
HMGB2-204ENST00000506267 TRIM52Q96A61 297 aa33.85■■■■□ 3.01
HMGB2-204ENST00000506267 CPS1P31327 1500 aa33.84■■■■□ 3.01
HMGB2-204ENST00000506267 STRCP1A6NGW2 1772 aa33.83■■■■□ 3.01
HMGB2-204ENST00000506267 RIMS2Q9UQ26 1411 aa33.79■■■■□ 3
HMGB2-204ENST00000506267 CHGAP10645 457 aaKnown RBP33.77■■■■□ 3
HMGB2-204ENST00000506267 TRPM2O94759 1503 aa33.77■■■■□ 3
HMGB2-204ENST00000506267 SLC4A1APQ9BWU0 796 aaKnown RBP33.76■■■□□ 2.99
HMGB2-204ENST00000506267 CLTCL1P53675 1640 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms