RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SPINK5Q9NQ38 1064 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-205ENST00000506154 PTPRKQ15262 1439 aa3.46□□□□□ -1.86
NEDD4-205ENST00000506154 MROH2AA6NES4 1674 aa3.46□□□□□ -1.86
NEDD4-205ENST00000506154 EFCAB6Q5THR3 1501 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 CAPN15O75808 1086 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 MYO5CQ9NQX4 1742 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 LAMC1P11047 1609 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 TDRD9Q8NDG6 1382 aaKnown RBP3.45□□□□□ -1.86
NEDD4-205ENST00000506154 SUPT6HQ7KZ85 1726 aaKnown RBP3.45□□□□□ -1.86
NEDD4-205ENST00000506154 MIA2Q96PC5 1412 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 MIER1Q8N108 512 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 ZC3H13Q5T200 1668 aaKnown RBP3.45□□□□□ -1.86
NEDD4-205ENST00000506154 KIAA1107Q9UPP5 1409 aa3.45□□□□□ -1.86
NEDD4-205ENST00000506154 CAMSAP1Q5T5Y3 1602 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 FER1L4A9Z1Z3 1794 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 GPBP1L1Q9HC44 474 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-205ENST00000506154 GPATCH8Q9UKJ3 1502 aaKnown RBP3.44□□□□□ -1.86
NEDD4-205ENST00000506154 NRXN1Q9ULB1 1477 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 PLEKHG5O94827 1062 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 TMEM131LA2VDJ0 1609 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 DUOX2Q9NRD8 1548 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 SPRYD3Q8NCJ5 442 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 SLC24A3Q9HC58 644 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 DIP2CQ9Y2E4 1556 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 CFAP74Q9C0B2 1584 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 HECW2Q9P2P5 1572 aa3.44□□□□□ -1.86
NEDD4-205ENST00000506154 ZNF142P52746 1687 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-205ENST00000506154 MKRN4PQ13434 485 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-205ENST00000506154 USP54Q70EL1 1684 aa3.43□□□□□ -1.86
NEDD4-205ENST00000506154 NCOA2Q15596 1464 aa3.43□□□□□ -1.86
NEDD4-205ENST00000506154 MSH5O43196 834 aa3.43□□□□□ -1.86
NEDD4-205ENST00000506154 POLA2Q14181 598 aa3.43□□□□□ -1.86
NEDD4-205ENST00000506154 ERICH6BQ5W0A0 696 aa3.43□□□□□ -1.86
NEDD4-205ENST00000506154 ARHGEF40Q8TER5 1519 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 ADAMTSL3P82987 1691 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 FMN1Q68DA7 1419 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 U3KPZ7 1027 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-205ENST00000506154 FHOD3Q2V2M9 1422 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 VSIG10Q8N0Z9 540 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 ZNF219Q9P2Y4 722 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-205ENST00000506154 UACAQ9BZF9 1416 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 MLH3Q9UHC1 1453 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 CDK13Q14004 1512 aaKnown RBP3.42□□□□□ -1.86
NEDD4-205ENST00000506154 MYO3AQ8NEV4 1616 aa3.42□□□□□ -1.86
NEDD4-205ENST00000506154 TROQ12816 1431 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-205ENST00000506154 NEO1Q92859 1461 aa3.41□□□□□ -1.86
NEDD4-205ENST00000506154 ROCK1Q13464 1354 aa3.41□□□□□ -1.86
NEDD4-205ENST00000506154 ZEB1P37275 1124 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-205ENST00000506154 AEBP1Q8IUX7 1158 aa3.41□□□□□ -1.86
NEDD4-205ENST00000506154 ANO8Q9HCE9 1232 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-205ENST00000506154 NRXN3Q9Y4C0 1643 aa3.41□□□□□ -1.86
NEDD4-205ENST00000506154 RTEL1-TNFRSF6BF6WH68 1400 aa3.4□□□□□ -1.86
NEDD4-205ENST00000506154 CARNS1A5YM72 827 aa3.4□□□□□ -1.86
NEDD4-205ENST00000506154 FOXD4L5Q5VV16 416 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-205ENST00000506154 FOXD4L4Q8WXT5 416 aaPredicted RBP3.4□□□□□ -1.86
NEDD4-205ENST00000506154 TEX14Q8IWB6 1497 aa3.4□□□□□ -1.86
NEDD4-205ENST00000506154 MYT1LQ9UL68 1186 aa3.4□□□□□ -1.86
NEDD4-205ENST00000506154 COL17A1Q9UMD9 1497 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-205ENST00000506154 POLR1AO95602 1720 aaPredicted RBP3.4□□□□□ -1.87
NEDD4-205ENST00000506154 KIAA1210Q9ULL0 1709 aa3.4□□□□□ -1.87
NEDD4-205ENST00000506154 PHLDB1Q86UU1 1377 aa3.4□□□□□ -1.87
NEDD4-205ENST00000506154 STK25O00506 426 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 HFM1A2PYH4 1435 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 E9PCH4 1651 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 PTPRTO14522 1441 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 STK24Q9Y6E0 443 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 PLA2R1Q13018 1463 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 CLSPNQ9HAW4 1339 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 SPATA31D1Q6ZQQ2 1576 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 PLCH2O75038 1416 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 PZPP20742 1482 aa3.39□□□□□ -1.87
NEDD4-205ENST00000506154 PRG4Q92954 1404 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-205ENST00000506154 ATXN8OSP0DMR3 200 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 MYOM3Q5VTT5 1437 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 OSCARQ8IYS5 282 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 BBXQ8WY36 941 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-205ENST00000506154 ABCC3O15438 1527 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 TET3O43151 1660 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 RIMS1Q86UR5 1692 aaKnown RBP3.38□□□□□ -1.87
NEDD4-205ENST00000506154 UGGT1Q9NYU2 1555 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 CEP152O94986 1710 aa3.38□□□□□ -1.87
NEDD4-205ENST00000506154 SYNMO15061 1565 aa3.37□□□□□ -1.87
NEDD4-205ENST00000506154 FBXO3Q9UK99 471 aa3.37□□□□□ -1.87
NEDD4-205ENST00000506154 ARHGAP31Q2M1Z3 1444 aa3.37□□□□□ -1.87
NEDD4-205ENST00000506154 FGD6Q6ZV73 1430 aa3.37□□□□□ -1.87
NEDD4-205ENST00000506154 PYGBP11216 843 aa3.37□□□□□ -1.87
NEDD4-205ENST00000506154 BRPF1P55201 1214 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-205ENST00000506154 POGZQ7Z3K3 1410 aa3.37□□□□□ -1.87
NEDD4-205ENST00000506154 DNAJC5Q9H3Z4 198 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 SPHKAPQ2M3C7 1700 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 ABCC5O15440 1437 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 DCAF8Q5TAQ9 597 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 CADPS2Q86UW7 1296 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 NAIPQ13075 1403 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 KNDC1Q76NI1 1749 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 ADGRB3O60242 1522 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 MED14O60244 1454 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 RBM25P49756 843 aaKnown RBP3.36□□□□□ -1.87
NEDD4-205ENST00000506154 PKNOX2Q96KN3 472 aa3.36□□□□□ -1.87
NEDD4-205ENST00000506154 TRPM2O94759 1503 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms