RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 A2ML1A8K2U0 1454 aa28.46■■■□□ 2.15
CCND3-208ENST00000505672 LRRC9Q6ZRR7 1453 aa28.46■■■□□ 2.15
CCND3-208ENST00000505672 DNMT1P26358 1616 aaKnown RBP28.46■■■□□ 2.15
CCND3-208ENST00000505672 ARHGEF5Q12774 1597 aa28.44■■■□□ 2.14
CCND3-208ENST00000505672 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
CCND3-208ENST00000505672 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
CCND3-208ENST00000505672 WASHC2CQ9Y4E1 1318 aa28.42■■■□□ 2.14
CCND3-208ENST00000505672 PZPP20742 1482 aa28.41■■■□□ 2.14
CCND3-208ENST00000505672 TNRQ92752 1358 aa28.41■■■□□ 2.14
CCND3-208ENST00000505672 DISP3Q9P2K9 1392 aa28.41■■■□□ 2.14
CCND3-208ENST00000505672 TSPY4P0CV99 314 aa28.41■■■□□ 2.14
CCND3-208ENST00000505672 TSPY10P0CW01 314 aa28.41■■■□□ 2.14
CCND3-208ENST00000505672 KDM5DQ9BY66 1539 aa28.41■■■□□ 2.14
CCND3-208ENST00000505672 ILDR2Q71H61 639 aa28.4■■■□□ 2.14
CCND3-208ENST00000505672 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
CCND3-208ENST00000505672 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
CCND3-208ENST00000505672 UBAP1LF5GYI3 381 aa28.33■■■□□ 2.13
CCND3-208ENST00000505672 NEURL4Q96JN8 1562 aa28.33■■■□□ 2.12
CCND3-208ENST00000505672 MAST1Q9Y2H9 1570 aa28.31■■■□□ 2.12
CCND3-208ENST00000505672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.29■■■□□ 2.123e-7■□□□□ 10.7
CCND3-208ENST00000505672 POLR1AO95602 1720 aaPredicted RBP28.27■■■□□ 2.12
CCND3-208ENST00000505672 RNF17Q9BXT8 1623 aaKnown RBP28.27■■■□□ 2.12
CCND3-208ENST00000505672 MYOM3Q5VTT5 1437 aa28.26■■■□□ 2.12
CCND3-208ENST00000505672 THEMISQ8N1K5 641 aaPredicted RBP28.26■■■□□ 2.11
CCND3-208ENST00000505672 NLRP1Q9C000 1473 aa28.26■■■□□ 2.11
CCND3-208ENST00000505672 ABCC3O15438 1527 aa28.25■■■□□ 2.11
CCND3-208ENST00000505672 ANKLE2Q86XL3 938 aa28.25■■■□□ 2.11
CCND3-208ENST00000505672 APLP2Q06481 763 aa28.24■■■□□ 2.11
CCND3-208ENST00000505672 SPATA31D1Q6ZQQ2 1576 aa28.24■■■□□ 2.11
CCND3-208ENST00000505672 UGGT1Q9NYU2 1555 aa28.23■■■□□ 2.11
CCND3-208ENST00000505672 MROH1Q8NDA8 1641 aa28.21■■■□□ 2.11
CCND3-208ENST00000505672 SHANK2Q9UPX8 1470 aa28.21■■■□□ 2.11
CCND3-208ENST00000505672 EIF2AK4Q9P2K8 1649 aaKnown RBP28.19■■■□□ 2.1
CCND3-208ENST00000505672 MED14O60244 1454 aa28.19■■■□□ 2.1
CCND3-208ENST00000505672 ZC3H13Q5T200 1668 aaKnown RBP28.17■■■□□ 2.1
CCND3-208ENST00000505672 VWDEQ8N2E2 1590 aa28.17■■■□□ 2.1
CCND3-208ENST00000505672 SOCS7O14512 581 aa28.17■■■□□ 2.1
CCND3-208ENST00000505672 CPS1P31327 1500 aa28.17■■■□□ 2.1
CCND3-208ENST00000505672 NPHP4O75161 1426 aaPredicted RBP28.16■■■□□ 2.1
CCND3-208ENST00000505672 ERVK-7P63135 1459 aa28.15■■■□□ 2.1
CCND3-208ENST00000505672 DEPDC5O75140 1603 aa28.15■■■□□ 2.1
CCND3-208ENST00000505672 DUOX2Q9NRD8 1548 aa28.13■■■□□ 2.09
CCND3-208ENST00000505672 ABCC5O15440 1437 aa28.13■■■□□ 2.09
CCND3-208ENST00000505672 PTPN23Q9H3S7 1636 aa28.12■■■□□ 2.09
CCND3-208ENST00000505672 CEP152O94986 1710 aa28.12■■■□□ 2.09
CCND3-208ENST00000505672 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
CCND3-208ENST00000505672 CROCC2H7BZ55 1655 aa28.1■■■□□ 2.09
CCND3-208ENST00000505672 PIP4K2BP78356 416 aa28.09■■■□□ 2.09
CCND3-208ENST00000505672 RRP7BPQ9NSQ0 103 aa28.09■■■□□ 2.09
CCND3-208ENST00000505672 KIF15Q9NS87 1388 aa28.09■■■□□ 2.09
CCND3-208ENST00000505672 TOM1O60784 492 aa28.08■■■□□ 2.09
CCND3-208ENST00000505672 HSPA1LP34931 641 aa28.08■■■□□ 2.09
CCND3-208ENST00000505672 IQGAP1P46940 1657 aa28.07■■■□□ 2.08
CCND3-208ENST00000505672 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
CCND3-208ENST00000505672 ALKQ9UM73 1620 aa28.05■■■□□ 2.08
CCND3-208ENST00000505672 STRCP1A6NGW2 1772 aa28.04■■■□□ 2.08
CCND3-208ENST00000505672 UBR1Q8IWV7 1749 aa28.04■■■□□ 2.08
CCND3-208ENST00000505672 PRDM15P57071 1507 aaPredicted RBP28.03■■■□□ 2.08
CCND3-208ENST00000505672 ARHGAP31Q2M1Z3 1444 aa28.03■■■□□ 2.08
CCND3-208ENST00000505672 ERBINQ96RT1 1412 aa28.03■■■□□ 2.08
CCND3-208ENST00000505672 DAPK1P53355 1430 aa28.02■■■□□ 2.08
CCND3-208ENST00000505672 FGD6Q6ZV73 1430 aa28.02■■■□□ 2.08
CCND3-208ENST00000505672 LTKP29376 864 aa28.02■■■□□ 2.08
CCND3-208ENST00000505672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.07
CCND3-208ENST00000505672 LRRC7Q96NW7 1537 aa27.98■■■□□ 2.07
CCND3-208ENST00000505672 ARHGAP23Q9P227 1491 aa27.98■■■□□ 2.07
CCND3-208ENST00000505672 CHIC2Q9UKJ5 165 aa27.97■■■□□ 2.07
CCND3-208ENST00000505672 SCAF11Q99590 1463 aaKnown RBP27.95■■■□□ 2.07
CCND3-208ENST00000505672 TXNDC2Q86VQ3 553 aa27.95■■■□□ 2.06
CCND3-208ENST00000505672 SLIT1O75093 1534 aa27.95■■■□□ 2.06
CCND3-208ENST00000505672 PIK3C2BO00750 1634 aa27.9■■■□□ 2.06
CCND3-208ENST00000505672 ANKRD30AQ9BXX3 1397 aa27.89■■■□□ 2.06
CCND3-208ENST00000505672 LMTK2Q8IWU2 1503 aa27.88■■■□□ 2.05
CCND3-208ENST00000505672 IDI1Q13907 227 aa27.88■■■□□ 2.05
CCND3-208ENST00000505672 MED1Q15648 1581 aaPredicted RBP27.88■■■□□ 2.05
CCND3-208ENST00000505672 KANK1Q14678 1352 aa27.87■■■□□ 2.05
CCND3-208ENST00000505672 TMEM2Q9UHN6 1383 aa27.86■■■□□ 2.05
CCND3-208ENST00000505672 SYNMO15061 1565 aa27.86■■■□□ 2.05
CCND3-208ENST00000505672 EID1Q9Y6B2 187 aa27.85■■■□□ 2.05
CCND3-208ENST00000505672 NOS1P29475 1434 aa27.81■■■□□ 2.04
CCND3-208ENST00000505672 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
CCND3-208ENST00000505672 XIRP1Q702N8 1843 aaKnown RBP27.81■■■□□ 2.04
CCND3-208ENST00000505672 FAM50AQ14320 339 aaKnown RBP27.8■■■□□ 2.04
CCND3-208ENST00000505672 SENP3Q9H4L4 574 aaPredicted RBP27.8■■■□□ 2.04
CCND3-208ENST00000505672 STAG3Q9UJ98 1225 aa27.8■■■□□ 2.04
CCND3-208ENST00000505672 KDM5AP29375 1690 aaKnown RBP27.78■■■□□ 2.04
CCND3-208ENST00000505672 EFCAB6Q5THR3 1501 aa27.78■■■□□ 2.04
CCND3-208ENST00000505672 TET3O43151 1660 aa27.75■■■□□ 2.03
CCND3-208ENST00000505672 SLC26A8Q96RN1 970 aa27.72■■■□□ 2.03
CCND3-208ENST00000505672 ANKRD50Q9ULJ7 1429 aa27.72■■■□□ 2.03
CCND3-208ENST00000505672 KCNA6P17658 529 aa27.71■■■□□ 2.03
CCND3-208ENST00000505672 SLC52A1Q9NWF4 448 aa27.71■■■□□ 2.03
CCND3-208ENST00000505672 ADGRB3O60242 1522 aa27.69■■■□□ 2.02
CCND3-208ENST00000505672 TMEM94Q12767 1356 aa27.68■■■□□ 2.02
CCND3-208ENST00000505672 PPARGC1BQ86YN6 1023 aaKnown RBP27.67■■■□□ 2.02
CCND3-208ENST00000505672 RBM33Q96EV2 1170 aaKnown RBP27.67■■■□□ 2.02
CCND3-208ENST00000505672 RPRD2Q5VT52 1461 aaKnown RBP27.64■■■□□ 2.02
CCND3-208ENST00000505672 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
CCND3-208ENST00000505672 FAM135BQ49AJ0 1406 aa27.63■■■□□ 2.01
CCND3-208ENST00000505672 PROSER2Q86WR7 435 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms