RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ILDR2Q71H61 639 aa9.45□□□□□ -0.9
GYPB-205ENST00000505583 ZNF335Q9H4Z2 1342 aaPredicted RBP9.44□□□□□ -0.9
GYPB-205ENST00000505583 TCOF1Q13428 1488 aaKnown RBP9.44□□□□□ -0.9
GYPB-205ENST00000505583 NCOA2Q15596 1464 aa9.44□□□□□ -0.9
GYPB-205ENST00000505583 DNMT1P26358 1616 aaKnown RBP9.44□□□□□ -0.9
GYPB-205ENST00000505583 CAMSAP2Q08AD1 1489 aa9.43□□□□□ -0.9
GYPB-205ENST00000505583 PLA2R1Q13018 1463 aa9.43□□□□□ -0.9
GYPB-205ENST00000505583 RTEL1-TNFRSF6BF6WH68 1400 aa9.43□□□□□ -0.9
GYPB-205ENST00000505583 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
GYPB-205ENST00000505583 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
GYPB-205ENST00000505583 DISP3Q9P2K9 1392 aa9.42□□□□□ -0.9
GYPB-205ENST00000505583 FBXO31Q5XUX0 539 aaPredicted RBP9.42□□□□□ -0.9
GYPB-205ENST00000505583 CCDC141Q6ZP82 1450 aa9.41□□□□□ -0.9
GYPB-205ENST00000505583 KIF3BO15066 747 aa9.41□□□□□ -0.9
GYPB-205ENST00000505583 POLR1AO95602 1720 aaPredicted RBP9.41□□□□□ -0.9
GYPB-205ENST00000505583 NEURL4Q96JN8 1562 aa9.41□□□□□ -0.9
GYPB-205ENST00000505583 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.9
GYPB-205ENST00000505583 ARHGEF5Q12774 1597 aa9.4□□□□□ -0.9
GYPB-205ENST00000505583 SPATA31D1Q6ZQQ2 1576 aa9.4□□□□□ -0.9
GYPB-205ENST00000505583 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
GYPB-205ENST00000505583 PKD2Q13563 968 aa9.39□□□□□ -0.91
GYPB-205ENST00000505583 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
GYPB-205ENST00000505583 PZPP20742 1482 aa9.39□□□□□ -0.91
GYPB-205ENST00000505583 LRRC9Q6ZRR7 1453 aa9.38□□□□□ -0.91
GYPB-205ENST00000505583 TNRQ92752 1358 aa9.37□□□□□ -0.91
GYPB-205ENST00000505583 UBAP1LF5GYI3 381 aa9.37□□□□□ -0.91
GYPB-205ENST00000505583 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
GYPB-205ENST00000505583 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
GYPB-205ENST00000505583 WASHC2CQ9Y4E1 1318 aa9.36□□□□□ -0.91
GYPB-205ENST00000505583 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
GYPB-205ENST00000505583 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
GYPB-205ENST00000505583 MAST1Q9Y2H9 1570 aa9.36□□□□□ -0.91
GYPB-205ENST00000505583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.91
GYPB-205ENST00000505583 FAM135AQ9P2D6 1515 aa9.36□□□□□ -0.91
GYPB-205ENST00000505583 CEP152O94986 1710 aa9.35□□□□□ -0.91
GYPB-205ENST00000505583 VWDEQ8N2E2 1590 aa9.35□□□□□ -0.91
GYPB-205ENST00000505583 ABCC3O15438 1527 aa9.35□□□□□ -0.91
GYPB-205ENST00000505583 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
GYPB-205ENST00000505583 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
GYPB-205ENST00000505583 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
GYPB-205ENST00000505583 RSPH4AQ5TD94 716 aa9.34□□□□□ -0.91
GYPB-205ENST00000505583 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
GYPB-205ENST00000505583 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
GYPB-205ENST00000505583 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
GYPB-205ENST00000505583 SOCS7O14512 581 aa9.33□□□□□ -0.92
GYPB-205ENST00000505583 EIF2AK4Q9P2K8 1649 aaKnown RBP9.33□□□□□ -0.92
GYPB-205ENST00000505583 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
GYPB-205ENST00000505583 DEPDC5O75140 1603 aa9.32□□□□□ -0.92
GYPB-205ENST00000505583 TSPY4P0CV99 314 aa9.32□□□□□ -0.92
GYPB-205ENST00000505583 TSPY10P0CW01 314 aa9.32□□□□□ -0.92
GYPB-205ENST00000505583 NLRP1Q9C000 1473 aa9.32□□□□□ -0.92
GYPB-205ENST00000505583 IQGAP1P46940 1657 aa9.32□□□□□ -0.92
GYPB-205ENST00000505583 MYOM3Q5VTT5 1437 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 CPS1P31327 1500 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 UBR1Q8IWV7 1749 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 MED14O60244 1454 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 ERVK-7P63135 1459 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 CROCC2H7BZ55 1655 aa9.31□□□□□ -0.92
GYPB-205ENST00000505583 NPHP4O75161 1426 aaPredicted RBP9.31□□□□□ -0.92
GYPB-205ENST00000505583 HSPA1LP34931 641 aa9.3□□□□□ -0.92
GYPB-205ENST00000505583 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
GYPB-205ENST00000505583 ANKLE2Q86XL3 938 aa9.3□□□□□ -0.92
GYPB-205ENST00000505583 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
GYPB-205ENST00000505583 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
GYPB-205ENST00000505583 DUOX2Q9NRD8 1548 aa9.28□□□□□ -0.92
GYPB-205ENST00000505583 ABCC5O15440 1437 aa9.28□□□□□ -0.92
GYPB-205ENST00000505583 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.92
GYPB-205ENST00000505583 PRDM15P57071 1507 aaPredicted RBP9.27□□□□□ -0.93
GYPB-205ENST00000505583 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
GYPB-205ENST00000505583 XIRP1Q702N8 1843 aaKnown RBP9.26□□□□□ -0.93
GYPB-205ENST00000505583 LRRC7Q96NW7 1537 aa9.26□□□□□ -0.93
GYPB-205ENST00000505583 PIK3C2BO00750 1634 aa9.26□□□□□ -0.93
GYPB-205ENST00000505583 KIF15Q9NS87 1388 aa9.25□□□□□ -0.93
GYPB-205ENST00000505583 TOM1O60784 492 aa9.25□□□□□ -0.93
GYPB-205ENST00000505583 LTKP29376 864 aa9.25□□□□□ -0.93
GYPB-205ENST00000505583 RRP7BPQ9NSQ0 103 aa9.25□□□□□ -0.93
GYPB-205ENST00000505583 ARHGAP23Q9P227 1491 aa9.25□□□□□ -0.93
GYPB-205ENST00000505583 DAPK1P53355 1430 aa9.24□□□□□ -0.93
GYPB-205ENST00000505583 SCAF11Q99590 1463 aaKnown RBP9.24□□□□□ -0.93
GYPB-205ENST00000505583 SLIT1O75093 1534 aa9.24□□□□□ -0.93
GYPB-205ENST00000505583 SYNMO15061 1565 aa9.24□□□□□ -0.93
GYPB-205ENST00000505583 ARHGAP31Q2M1Z3 1444 aa9.23□□□□□ -0.93
GYPB-205ENST00000505583 ERBINQ96RT1 1412 aa9.23□□□□□ -0.93
GYPB-205ENST00000505583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.93
GYPB-205ENST00000505583 FGD6Q6ZV73 1430 aa9.22□□□□□ -0.93
GYPB-205ENST00000505583 ZBTB22O15209 634 aa9.22□□□□□ -0.93
GYPB-205ENST00000505583 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
GYPB-205ENST00000505583 CHIC2Q9UKJ5 165 aa9.22□□□□□ -0.93
GYPB-205ENST00000505583 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.94
GYPB-205ENST00000505583 TMEM2Q9UHN6 1383 aa9.2□□□□□ -0.94
GYPB-205ENST00000505583 LMTK2Q8IWU2 1503 aa9.2□□□□□ -0.94
GYPB-205ENST00000505583 KDM5AP29375 1690 aaKnown RBP9.2□□□□□ -0.94
GYPB-205ENST00000505583 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
GYPB-205ENST00000505583 IDI1Q13907 227 aa9.19□□□□□ -0.94
GYPB-205ENST00000505583 EFCAB6Q5THR3 1501 aa9.19□□□□□ -0.94
GYPB-205ENST00000505583 TET3O43151 1660 aa9.18□□□□□ -0.94
GYPB-205ENST00000505583 NOS1P29475 1434 aa9.17□□□□□ -0.94
GYPB-205ENST00000505583 KANK1Q14678 1352 aa9.17□□□□□ -0.94
GYPB-205ENST00000505583 ANKRD30AQ9BXX3 1397 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms