RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
CDC42SE2-208ENST00000505065 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
CDC42SE2-208ENST00000505065 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
CDC42SE2-208ENST00000505065 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
CDC42SE2-208ENST00000505065 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.353e-7■■■■■ 27.8
CDC42SE2-208ENST00000505065 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
CDC42SE2-208ENST00000505065 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
CDC42SE2-208ENST00000505065 SPHKAPQ2M3C7 1700 aa12.84□□□□□ -0.35
CDC42SE2-208ENST00000505065 RIMS1Q86UR5 1692 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-208ENST00000505065 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
CDC42SE2-208ENST00000505065 ARHGAP31Q2M1Z3 1444 aa12.84□□□□□ -0.35
CDC42SE2-208ENST00000505065 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
CDC42SE2-208ENST00000505065 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
CDC42SE2-208ENST00000505065 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
CDC42SE2-208ENST00000505065 PZPP20742 1482 aa12.81□□□□□ -0.36
CDC42SE2-208ENST00000505065 HRCP23327 699 aa12.81□□□□□ -0.36
CDC42SE2-208ENST00000505065 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
CDC42SE2-208ENST00000505065 IFT172Q9UG01 1749 aa12.8□□□□□ -0.36
CDC42SE2-208ENST00000505065 SYNMO15061 1565 aa12.79□□□□□ -0.36
CDC42SE2-208ENST00000505065 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
CDC42SE2-208ENST00000505065 MYO3AQ8NEV4 1616 aa12.78□□□□□ -0.36
CDC42SE2-208ENST00000505065 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
CDC42SE2-208ENST00000505065 CNTLNQ9NXG0 1405 aa12.78□□□□□ -0.36
CDC42SE2-208ENST00000505065 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-208ENST00000505065 UBR1Q8IWV7 1749 aa12.75□□□□□ -0.37
CDC42SE2-208ENST00000505065 NPATQ14207 1427 aa12.75□□□□□ -0.37
CDC42SE2-208ENST00000505065 TRPM2O94759 1503 aa12.75□□□□□ -0.37
CDC42SE2-208ENST00000505065 PTPRTO14522 1441 aa12.74□□□□□ -0.37
CDC42SE2-208ENST00000505065 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
CDC42SE2-208ENST00000505065 NOS1P29475 1434 aa12.73□□□□□ -0.37
CDC42SE2-208ENST00000505065 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
CDC42SE2-208ENST00000505065 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE2-208ENST00000505065 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.38
CDC42SE2-208ENST00000505065 PTPRMP28827 1452 aa12.7□□□□□ -0.38
CDC42SE2-208ENST00000505065 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
CDC42SE2-208ENST00000505065 TSPY4P0CV99 314 aa12.7□□□□□ -0.38
CDC42SE2-208ENST00000505065 TSPY10P0CW01 314 aa12.7□□□□□ -0.38
CDC42SE2-208ENST00000505065 ERVK-7P63135 1459 aa12.69□□□□□ -0.38
CDC42SE2-208ENST00000505065 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE2-208ENST00000505065 KIF1BO60333 1816 aa12.68□□□□□ -0.38
CDC42SE2-208ENST00000505065 SETD1BQ9UPS6 1966 aaKnown RBP12.68□□□□□ -0.38
CDC42SE2-208ENST00000505065 PPLO60437 1756 aa12.68□□□□□ -0.38
CDC42SE2-208ENST00000505065 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
CDC42SE2-208ENST00000505065 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
CDC42SE2-208ENST00000505065 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
CDC42SE2-208ENST00000505065 UGGT1Q9NYU2 1555 aa12.67□□□□□ -0.38
CDC42SE2-208ENST00000505065 ADGRB3O60242 1522 aa12.67□□□□□ -0.38
CDC42SE2-208ENST00000505065 RAB3GAP2Q9H2M9 1393 aa12.66□□□□□ -0.38
CDC42SE2-208ENST00000505065 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
CDC42SE2-208ENST00000505065 FAM50AQ14320 339 aaKnown RBP12.65□□□□□ -0.38
CDC42SE2-208ENST00000505065 STRCQ7RTU9 1775 aa12.65□□□□□ -0.39
CDC42SE2-208ENST00000505065 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.39
CDC42SE2-208ENST00000505065 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
CDC42SE2-208ENST00000505065 SLIT1O75093 1534 aa12.63□□□□□ -0.39
CDC42SE2-208ENST00000505065 NLRP1Q9C000 1473 aa12.63□□□□□ -0.39
CDC42SE2-208ENST00000505065 ARHGAP23Q9P227 1491 aa12.61□□□□□ -0.39
CDC42SE2-208ENST00000505065 RRP7BPQ9NSQ0 103 aa12.61□□□□□ -0.39
CDC42SE2-208ENST00000505065 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
CDC42SE2-208ENST00000505065 NRXN3Q9Y4C0 1643 aa12.6□□□□□ -0.39
CDC42SE2-208ENST00000505065 ZMYM3Q14202 1370 aa12.59□□□□□ -0.39
CDC42SE2-208ENST00000505065 KIAA1210Q9ULL0 1709 aa12.59□□□□□ -0.39
CDC42SE2-208ENST00000505065 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
CDC42SE2-208ENST00000505065 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
CDC42SE2-208ENST00000505065 NRXN1Q9ULB1 1477 aa12.58□□□□□ -0.4
CDC42SE2-208ENST00000505065 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
CDC42SE2-208ENST00000505065 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
CDC42SE2-208ENST00000505065 KANK1Q14678 1352 aa12.55□□□□□ -0.4
CDC42SE2-208ENST00000505065 CFAP65Q6ZU64 1925 aaKnown RBP12.55□□□□□ -0.4
CDC42SE2-208ENST00000505065 MED14O60244 1454 aa12.55□□□□□ -0.4
CDC42SE2-208ENST00000505065 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
CDC42SE2-208ENST00000505065 DHX57Q6P158 1386 aaKnown RBP12.54□□□□□ -0.4
CDC42SE2-208ENST00000505065 KIF3BO15066 747 aa12.54□□□□□ -0.4
CDC42SE2-208ENST00000505065 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
CDC42SE2-208ENST00000505065 SETBP1Q9Y6X0 1596 aa12.54□□□□□ -0.4
CDC42SE2-208ENST00000505065 LAMC1P11047 1609 aa12.54□□□□□ -0.4
CDC42SE2-208ENST00000505065 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
CDC42SE2-208ENST00000505065 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
CDC42SE2-208ENST00000505065 DIP2AQ14689 1571 aa12.52□□□□□ -0.4
CDC42SE2-208ENST00000505065 IQGAP1P46940 1657 aa12.52□□□□□ -0.41
CDC42SE2-208ENST00000505065 NUP155O75694 1391 aa12.51□□□□□ -0.41
CDC42SE2-208ENST00000505065 MYOM2P54296 1465 aa12.51□□□□□ -0.41
CDC42SE2-208ENST00000505065 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
CDC42SE2-208ENST00000505065 CHD2O14647 1828 aaKnown RBP12.48□□□□□ -0.41
CDC42SE2-208ENST00000505065 TNRQ92752 1358 aa12.48□□□□□ -0.41
CDC42SE2-208ENST00000505065 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
CDC42SE2-208ENST00000505065 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
CDC42SE2-208ENST00000505065 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
CDC42SE2-208ENST00000505065 MPHOSPH9Q99550 1183 aa12.46□□□□□ -0.41
CDC42SE2-208ENST00000505065 XIRP1Q702N8 1843 aaKnown RBP12.46□□□□□ -0.41
CDC42SE2-208ENST00000505065 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.42
CDC42SE2-208ENST00000505065 WASHC2CQ9Y4E1 1318 aa12.45□□□□□ -0.42
CDC42SE2-208ENST00000505065 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CDC42SE2-208ENST00000505065 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
CDC42SE2-208ENST00000505065 GGT6Q6P531 493 aa12.41□□□□□ -0.42
CDC42SE2-208ENST00000505065 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
CDC42SE2-208ENST00000505065 ITGAEP38570 1179 aa12.4□□□□□ -0.42
CDC42SE2-208ENST00000505065 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
CDC42SE2-208ENST00000505065 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
CDC42SE2-208ENST00000505065 ARHGEF28Q8N1W1 1705 aaKnown RBP12.38□□□□□ -0.43
CDC42SE2-208ENST00000505065 FBXO31Q5XUX0 539 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms