RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ABCC1P33527 1531 aa10.29□□□□□ -0.76
ATP2C1-208ENST00000504948 TEX14Q8IWB6 1497 aa10.29□□□□□ -0.76
ATP2C1-208ENST00000504948 CLIP1P30622 1438 aa10.29□□□□□ -0.76
ATP2C1-208ENST00000504948 HSP90AA2PQ14568 343 aaPredicted RBP10.28□□□□□ -0.76
ATP2C1-208ENST00000504948 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
ATP2C1-208ENST00000504948 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATP2C1-208ENST00000504948 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.76
ATP2C1-208ENST00000504948 DEPDC5O75140 1603 aa10.27□□□□□ -0.76
ATP2C1-208ENST00000504948 ABCA6Q8N139 1617 aa10.27□□□□□ -0.77
ATP2C1-208ENST00000504948 ANP32BQ92688 251 aaKnown RBP10.27□□□□□ -0.77
ATP2C1-208ENST00000504948 FRAT1Q92837 279 aaPredicted RBP10.26□□□□□ -0.77
ATP2C1-208ENST00000504948 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
ATP2C1-208ENST00000504948 GSE1Q14687 1217 aa10.26□□□□□ -0.77
ATP2C1-208ENST00000504948 ARHGEF12Q9NZN5 1544 aa10.26□□□□□ -0.77
ATP2C1-208ENST00000504948 RNF17Q9BXT8 1623 aaKnown RBP10.26□□□□□ -0.77
ATP2C1-208ENST00000504948 KDM5AP29375 1690 aaKnown RBP10.26□□□□□ -0.77
ATP2C1-208ENST00000504948 PODXL2Q9NZ53 605 aa10.25□□□□□ -0.77
ATP2C1-208ENST00000504948 AGLP35573 1532 aa10.25□□□□□ -0.77
ATP2C1-208ENST00000504948 FHOD3Q2V2M9 1422 aa10.25□□□□□ -0.77
ATP2C1-208ENST00000504948 SAMD9LQ8IVG5 1584 aa10.25□□□□□ -0.77
ATP2C1-208ENST00000504948 PTPRGP23470 1445 aa10.25□□□□□ -0.77
ATP2C1-208ENST00000504948 CCDC184Q52MB2 194 aa10.25□□□□□ -0.77
ATP2C1-208ENST00000504948 UPF2Q9HAU5 1272 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 EIF2AK4Q9P2K8 1649 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 DIP2CQ9Y2E4 1556 aa10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 TIAM1Q13009 1591 aa10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 EXOC6Q8TAG9 804 aa10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 CCDC18Q5T9S5 1454 aa10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 DNTTIP2Q5QJE6 756 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
ATP2C1-208ENST00000504948 CASKIN1Q8WXD9 1431 aa10.23□□□□□ -0.77
ATP2C1-208ENST00000504948 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
ATP2C1-208ENST00000504948 ARHGEF5Q12774 1597 aa10.23□□□□□ -0.77
ATP2C1-208ENST00000504948 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
ATP2C1-208ENST00000504948 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
ATP2C1-208ENST00000504948 PDE4AP27815 886 aa10.22□□□□□ -0.77
ATP2C1-208ENST00000504948 HECW2Q9P2P5 1572 aa10.22□□□□□ -0.77
ATP2C1-208ENST00000504948 ZC3H13Q5T200 1668 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-208ENST00000504948 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-208ENST00000504948 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
ATP2C1-208ENST00000504948 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
ATP2C1-208ENST00000504948 SLC24A1O60721 1099 aa10.21□□□□□ -0.78
ATP2C1-208ENST00000504948 FRAT2O75474 233 aaPredicted RBP10.21□□□□□ -0.78
ATP2C1-208ENST00000504948 CC2D1BQ5T0F9 858 aaKnown RBP10.21□□□□□ -0.78
ATP2C1-208ENST00000504948 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
ATP2C1-208ENST00000504948 NFKBIBQ15653 356 aa10.2□□□□□ -0.78
ATP2C1-208ENST00000504948 MROH1Q8NDA8 1641 aa10.19□□□□□ -0.78
ATP2C1-208ENST00000504948 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
ATP2C1-208ENST00000504948 C3P01024 1663 aa10.18□□□□□ -0.78
ATP2C1-208ENST00000504948 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
ATP2C1-208ENST00000504948 STRCQ7RTU9 1775 aa10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 CAMSAP2Q08AD1 1489 aa10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 RBM10P98175 930 aaKnown RBP10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 EHBP1L1Q8N3D4 1523 aa10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 DHX57Q6P158 1386 aaKnown RBP10.16□□□□□ -0.78
ATP2C1-208ENST00000504948 ZFYVE16Q7Z3T8 1539 aa10.15□□□□□ -0.78
ATP2C1-208ENST00000504948 PTMAP06454 111 aaKnown RBP10.15□□□□□ -0.78
ATP2C1-208ENST00000504948 WDR43Q15061 677 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATP2C1-208ENST00000504948 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
ATP2C1-208ENST00000504948 VWDEQ8N2E2 1590 aa10.15□□□□□ -0.78
ATP2C1-208ENST00000504948 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.79
ATP2C1-208ENST00000504948 USP35Q9P2H5 1018 aa10.15□□□□□ -0.79
ATP2C1-208ENST00000504948 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
ATP2C1-208ENST00000504948 MLH3Q9UHC1 1453 aa10.14□□□□□ -0.79
ATP2C1-208ENST00000504948 SUPT6HQ7KZ85 1726 aaKnown RBP10.14□□□□□ -0.79
ATP2C1-208ENST00000504948 FMN1Q68DA7 1419 aa10.14□□□□□ -0.79
ATP2C1-208ENST00000504948 BECN1Q14457 450 aa10.14□□□□□ -0.79
ATP2C1-208ENST00000504948 MADDQ8WXG6 1647 aa10.13□□□□□ -0.79
ATP2C1-208ENST00000504948 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
ATP2C1-208ENST00000504948 UBE2Q2Q8WVN8 375 aa10.13□□□□□ -0.79
ATP2C1-208ENST00000504948 RAB3GAP2Q9H2M9 1393 aa10.13□□□□□ -0.79
ATP2C1-208ENST00000504948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATP2C1-208ENST00000504948 RCAN3Q9UKA8 241 aa10.12□□□□□ -0.79
ATP2C1-208ENST00000504948 PLCH2O75038 1416 aa10.12□□□□□ -0.79
ATP2C1-208ENST00000504948 POGZQ7Z3K3 1410 aa10.12□□□□□ -0.79
ATP2C1-208ENST00000504948 KDM5DQ9BY66 1539 aa10.12□□□□□ -0.79
ATP2C1-208ENST00000504948 MPNDQ8N594 471 aa10.12□□□□□ -0.79
ATP2C1-208ENST00000504948 PPP1R15AO75807 674 aaPredicted RBP10.11□□□□□ -0.79
ATP2C1-208ENST00000504948 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
ATP2C1-208ENST00000504948 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
ATP2C1-208ENST00000504948 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
ATP2C1-208ENST00000504948 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
ATP2C1-208ENST00000504948 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 CYB5RLQ6IPT4 315 aa10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 TROQ12816 1431 aaPredicted RBP10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 GOLGA6L3A6NEY3 463 aa10.09□□□□□ -0.79
ATP2C1-208ENST00000504948 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
ATP2C1-208ENST00000504948 NUDCQ9Y266 331 aa10.08□□□□□ -0.8
ATP2C1-208ENST00000504948 POLR1AO95602 1720 aaPredicted RBP10.08□□□□□ -0.8
ATP2C1-208ENST00000504948 PRDM10Q9NQV6 1147 aa10.08□□□□□ -0.8
ATP2C1-208ENST00000504948 POGKQ9P215 609 aa10.08□□□□□ -0.8
ATP2C1-208ENST00000504948 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
ATP2C1-208ENST00000504948 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
ATP2C1-208ENST00000504948 TCERG1O14776 1098 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-208ENST00000504948 MYH16Q9H6N6 1097 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms