RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 FBXO31Q5XUX0 539 aaPredicted RBP20.15■□□□□ 0.82
RNF4-206ENST00000504782 PTPRTO14522 1441 aa20.15■□□□□ 0.82
RNF4-206ENST00000504782 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
RNF4-206ENST00000504782 KDM5DQ9BY66 1539 aa20.13■□□□□ 0.81
RNF4-206ENST00000504782 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
RNF4-206ENST00000504782 APLP2Q06481 763 aa20.11■□□□□ 0.81
RNF4-206ENST00000504782 CROCC2H7BZ55 1655 aa20.1■□□□□ 0.81
RNF4-206ENST00000504782 DNMT1P26358 1616 aaKnown RBP20.1■□□□□ 0.81
RNF4-206ENST00000504782 RNF17Q9BXT8 1623 aaKnown RBP20.1■□□□□ 0.81
RNF4-206ENST00000504782 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
RNF4-206ENST00000504782 PZPP20742 1482 aa20.09■□□□□ 0.81
RNF4-206ENST00000504782 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
RNF4-206ENST00000504782 MROH1Q8NDA8 1641 aa20.09■□□□□ 0.81
RNF4-206ENST00000504782 ABCC5O15440 1437 aa20.08■□□□□ 0.8
RNF4-206ENST00000504782 A2ML1A8K2U0 1454 aa20.07■□□□□ 0.8
RNF4-206ENST00000504782 EIF2AK4Q9P2K8 1649 aaKnown RBP20.07■□□□□ 0.8
RNF4-206ENST00000504782 FAM135AQ9P2D6 1515 aa20.07■□□□□ 0.8
RNF4-206ENST00000504782 CEP152O94986 1710 aa20.06■□□□□ 0.8
RNF4-206ENST00000504782 TNRQ92752 1358 aa20.06■□□□□ 0.8
RNF4-206ENST00000504782 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
RNF4-206ENST00000504782 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
RNF4-206ENST00000504782 ABCC3O15438 1527 aa20.05■□□□□ 0.8
RNF4-206ENST00000504782 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
RNF4-206ENST00000504782 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
RNF4-206ENST00000504782 DUOX2Q9NRD8 1548 aa20.03■□□□□ 0.8
RNF4-206ENST00000504782 DAPK1P53355 1430 aa20.02■□□□□ 0.8
RNF4-206ENST00000504782 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
RNF4-206ENST00000504782 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.8
RNF4-206ENST00000504782 SHANK2Q9UPX8 1470 aa20.01■□□□□ 0.79
RNF4-206ENST00000504782 ZNF335Q9H4Z2 1342 aaPredicted RBP20.01■□□□□ 0.79
RNF4-206ENST00000504782 KIF15Q9NS87 1388 aa20■□□□□ 0.79
RNF4-206ENST00000504782 POLR1AO95602 1720 aaPredicted RBP20■□□□□ 0.79
RNF4-206ENST00000504782 PKD2Q13563 968 aa20■□□□□ 0.79
RNF4-206ENST00000504782 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
RNF4-206ENST00000504782 NEURL4Q96JN8 1562 aa19.99■□□□□ 0.79
RNF4-206ENST00000504782 SPATA31D1Q6ZQQ2 1576 aa19.97■□□□□ 0.79
RNF4-206ENST00000504782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.96■□□□□ 0.79
RNF4-206ENST00000504782 ERVK-7P63135 1459 aa19.95■□□□□ 0.78
RNF4-206ENST00000504782 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
RNF4-206ENST00000504782 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
RNF4-206ENST00000504782 NLRP1Q9C000 1473 aa19.94■□□□□ 0.78
RNF4-206ENST00000504782 PRDM15P57071 1507 aaPredicted RBP19.94■□□□□ 0.78
RNF4-206ENST00000504782 DEPDC5O75140 1603 aa19.94■□□□□ 0.78
RNF4-206ENST00000504782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.78
RNF4-206ENST00000504782 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
RNF4-206ENST00000504782 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
RNF4-206ENST00000504782 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
RNF4-206ENST00000504782 UBR1Q8IWV7 1749 aa19.89■□□□□ 0.77
RNF4-206ENST00000504782 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
RNF4-206ENST00000504782 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
RNF4-206ENST00000504782 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
RNF4-206ENST00000504782 VWDEQ8N2E2 1590 aa19.86■□□□□ 0.77
RNF4-206ENST00000504782 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
RNF4-206ENST00000504782 ARHGAP31Q2M1Z3 1444 aa19.85■□□□□ 0.77
RNF4-206ENST00000504782 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
RNF4-206ENST00000504782 MED14O60244 1454 aa19.84■□□□□ 0.77
RNF4-206ENST00000504782 NPHP4O75161 1426 aaPredicted RBP19.84■□□□□ 0.77
RNF4-206ENST00000504782 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
RNF4-206ENST00000504782 STRCP1A6NGW2 1772 aa19.83■□□□□ 0.76
RNF4-206ENST00000504782 KANK1Q14678 1352 aa19.81■□□□□ 0.76
RNF4-206ENST00000504782 LMTK2Q8IWU2 1503 aa19.81■□□□□ 0.76
RNF4-206ENST00000504782 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
RNF4-206ENST00000504782 SYNMO15061 1565 aa19.78■□□□□ 0.76
RNF4-206ENST00000504782 LTKP29376 864 aa19.78■□□□□ 0.76
RNF4-206ENST00000504782 ANKRD50Q9ULJ7 1429 aa19.77■□□□□ 0.76
RNF4-206ENST00000504782 CPS1P31327 1500 aa19.76■□□□□ 0.75
RNF4-206ENST00000504782 EFCAB6Q5THR3 1501 aa19.76■□□□□ 0.75
RNF4-206ENST00000504782 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
RNF4-206ENST00000504782 SLIT1O75093 1534 aa19.76■□□□□ 0.75
RNF4-206ENST00000504782 IDI1Q13907 227 aa19.74■□□□□ 0.75
RNF4-206ENST00000504782 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
RNF4-206ENST00000504782 TXNDC2Q86VQ3 553 aa19.73■□□□□ 0.75
RNF4-206ENST00000504782 NOS1P29475 1434 aa19.73■□□□□ 0.75
RNF4-206ENST00000504782 ITGAEP38570 1179 aa19.71■□□□□ 0.75
RNF4-206ENST00000504782 UNC13BO14795 1591 aa19.7■□□□□ 0.74
RNF4-206ENST00000504782 ALKQ9UM73 1620 aa19.7■□□□□ 0.74
RNF4-206ENST00000504782 MYO5BQ9ULV0 1848 aa19.7■□□□□ 0.74
RNF4-206ENST00000504782 TET3O43151 1660 aa19.7■□□□□ 0.74
RNF4-206ENST00000504782 KDM5AP29375 1690 aaKnown RBP19.7■□□□□ 0.74
RNF4-206ENST00000504782 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
RNF4-206ENST00000504782 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
RNF4-206ENST00000504782 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
RNF4-206ENST00000504782 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
RNF4-206ENST00000504782 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
RNF4-206ENST00000504782 E9PCH4 1651 aa19.67■□□□□ 0.74
RNF4-206ENST00000504782 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
RNF4-206ENST00000504782 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
RNF4-206ENST00000504782 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
RNF4-206ENST00000504782 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
RNF4-206ENST00000504782 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
RNF4-206ENST00000504782 EID1Q9Y6B2 187 aa19.65■□□□□ 0.74
RNF4-206ENST00000504782 RPRD2Q5VT52 1461 aaKnown RBP19.64■□□□□ 0.73
RNF4-206ENST00000504782 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
RNF4-206ENST00000504782 ILDR2Q71H61 639 aa19.63■□□□□ 0.73
RNF4-206ENST00000504782 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
RNF4-206ENST00000504782 TOM1O60784 492 aa19.62■□□□□ 0.73
RNF4-206ENST00000504782 HSPA1LP34931 641 aa19.62■□□□□ 0.73
RNF4-206ENST00000504782 SLC52A1Q9NWF4 448 aa19.61■□□□□ 0.73
RNF4-206ENST00000504782 TMEM131LA2VDJ0 1609 aa19.61■□□□□ 0.73
RNF4-206ENST00000504782 SLC26A8Q96RN1 970 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms