RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ZNF518AQ6AHZ1 1483 aa14.76□□□□□ -0.05
DDX41-203ENST00000504781 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
DDX41-203ENST00000504781 DUOX2Q9NRD8 1548 aa14.76□□□□□ -0.05
DDX41-203ENST00000504781 ATP10AO60312 1499 aa14.76□□□□□ -0.05
DDX41-203ENST00000504781 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
DDX41-203ENST00000504781 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
DDX41-203ENST00000504781 NUP155O75694 1391 aa14.73□□□□□ -0.05
DDX41-203ENST00000504781 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
DDX41-203ENST00000504781 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
DDX41-203ENST00000504781 HSPA2P54652 639 aa14.72□□□□□ -0.05
DDX41-203ENST00000504781 SIN3AQ96ST3 1273 aa14.7□□□□□ -0.06
DDX41-203ENST00000504781 ATP7AQ04656 1500 aa14.7□□□□□ -0.06
DDX41-203ENST00000504781 CEBPAP49715 358 aaPredicted RBP14.69□□□□□ -0.06
DDX41-203ENST00000504781 NEUROD1Q13562 356 aa14.69□□□□□ -0.06
DDX41-203ENST00000504781 KDM5CP41229 1560 aa14.68□□□□□ -0.06
DDX41-203ENST00000504781 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
DDX41-203ENST00000504781 INO80Q9ULG1 1556 aaPredicted RBP14.68□□□□□ -0.06
DDX41-203ENST00000504781 FER1L4A9Z1Z3 1794 aa14.68□□□□□ -0.06
DDX41-203ENST00000504781 KDM5DQ9BY66 1539 aa14.67□□□□□ -0.06
DDX41-203ENST00000504781 PKD2Q13563 968 aa14.67□□□□□ -0.06
DDX41-203ENST00000504781 ESF1Q9H501 851 aaKnown RBP14.67□□□□□ -0.06
DDX41-203ENST00000504781 ANKRD30BQ9BXX2 1392 aa14.67□□□□□ -0.06
DDX41-203ENST00000504781 PZPP20742 1482 aa14.67□□□□□ -0.06
DDX41-203ENST00000504781 KIDINS220Q9ULH0 1771 aa14.66□□□□□ -0.06
DDX41-203ENST00000504781 KIF3BO15066 747 aa14.65□□□□□ -0.06
DDX41-203ENST00000504781 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
DDX41-203ENST00000504781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.073e-8■■□□□ 14.2
DDX41-203ENST00000504781 DIP2CQ9Y2E4 1556 aa14.64□□□□□ -0.07
DDX41-203ENST00000504781 A2MP01023 1474 aa14.63□□□□□ -0.07
DDX41-203ENST00000504781 KANK1Q14678 1352 aa14.62□□□□□ -0.07
DDX41-203ENST00000504781 UNC13BO14795 1591 aa14.62□□□□□ -0.07
DDX41-203ENST00000504781 FOXD1Q16676 465 aa14.61□□□□□ -0.07
DDX41-203ENST00000504781 ABCA6Q8N139 1617 aa14.61□□□□□ -0.07
DDX41-203ENST00000504781 EIF2AK4Q9P2K8 1649 aaKnown RBP14.61□□□□□ -0.07
DDX41-203ENST00000504781 FAM135AQ9P2D6 1515 aa14.6□□□□□ -0.07
DDX41-203ENST00000504781 TONSLQ96HA7 1378 aa14.6□□□□□ -0.07
DDX41-203ENST00000504781 FBXO41Q8TF61 875 aa14.59□□□□□ -0.07
DDX41-203ENST00000504781 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
DDX41-203ENST00000504781 IQGAP3Q86VI3 1631 aa14.58□□□□□ -0.08
DDX41-203ENST00000504781 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
DDX41-203ENST00000504781 REREQ9P2R6 1566 aa14.56□□□□□ -0.08
DDX41-203ENST00000504781 DEPDC5O75140 1603 aa14.56□□□□□ -0.08
DDX41-203ENST00000504781 UHRF1BP1Q6BDS2 1440 aa14.55□□□□□ -0.08
DDX41-203ENST00000504781 AGLP35573 1532 aa14.55□□□□□ -0.08
DDX41-203ENST00000504781 GGT6Q6P531 493 aa14.54□□□□□ -0.08
DDX41-203ENST00000504781 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
DDX41-203ENST00000504781 VWDEQ8N2E2 1590 aa14.53□□□□□ -0.08
DDX41-203ENST00000504781 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
DDX41-203ENST00000504781 L3MBTL2Q969R5 705 aa14.52□□□□□ -0.09
DDX41-203ENST00000504781 WASHC2CQ9Y4E1 1318 aa14.51□□□□□ -0.09
DDX41-203ENST00000504781 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
DDX41-203ENST00000504781 CNTLNQ9NXG0 1405 aa14.5□□□□□ -0.09
DDX41-203ENST00000504781 C3P01024 1663 aa14.5□□□□□ -0.09
DDX41-203ENST00000504781 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
DDX41-203ENST00000504781 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
DDX41-203ENST00000504781 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
DDX41-203ENST00000504781 LMTK2Q8IWU2 1503 aa14.5□□□□□ -0.09
DDX41-203ENST00000504781 CERKQ8TCT0 537 aa14.49□□□□□ -0.09
DDX41-203ENST00000504781 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
DDX41-203ENST00000504781 PTPRTO14522 1441 aa14.49□□□□□ -0.09
DDX41-203ENST00000504781 ZMYM3Q14202 1370 aa14.48□□□□□ -0.09
DDX41-203ENST00000504781 TET3O43151 1660 aa14.48□□□□□ -0.09
DDX41-203ENST00000504781 PLA2R1Q13018 1463 aa14.47□□□□□ -0.09
DDX41-203ENST00000504781 MROH1Q8NDA8 1641 aa14.47□□□□□ -0.09
DDX41-203ENST00000504781 CCDC144AA2RUR9 1427 aa14.47□□□□□ -0.09
DDX41-203ENST00000504781 E9PCH4 1651 aa14.44□□□□□ -0.1
DDX41-203ENST00000504781 CLTCQ00610 1675 aaKnown RBP14.43□□□□□ -0.1
DDX41-203ENST00000504781 ARHGAP31Q2M1Z3 1444 aa14.43□□□□□ -0.1
DDX41-203ENST00000504781 STRCQ7RTU9 1775 aa14.42□□□□□ -0.1
DDX41-203ENST00000504781 NPATQ14207 1427 aa14.41□□□□□ -0.1
DDX41-203ENST00000504781 MROH2AA6NES4 1674 aa14.4□□□□□ -0.1
DDX41-203ENST00000504781 DCAF11Q8TEB1 546 aa14.4□□□□□ -0.1
DDX41-203ENST00000504781 ABCC3O15438 1527 aa14.4□□□□□ -0.1
DDX41-203ENST00000504781 EFCAB6Q5THR3 1501 aa14.4□□□□□ -0.1
DDX41-203ENST00000504781 NCKAP5LQ9HCH0 1330 aa14.4□□□□□ -0.1
DDX41-203ENST00000504781 NBPF8Q3BBV2 869 aa14.39□□□□□ -0.11
DDX41-203ENST00000504781 TRPM2O94759 1503 aa14.39□□□□□ -0.11
DDX41-203ENST00000504781 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
DDX41-203ENST00000504781 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
DDX41-203ENST00000504781 SLC52A1Q9NWF4 448 aa14.38□□□□□ -0.11
DDX41-203ENST00000504781 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
DDX41-203ENST00000504781 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
DDX41-203ENST00000504781 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
DDX41-203ENST00000504781 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
DDX41-203ENST00000504781 CEP152O94986 1710 aa14.37□□□□□ -0.11
DDX41-203ENST00000504781 FBXO31Q5XUX0 539 aaPredicted RBP14.36□□□□□ -0.11
DDX41-203ENST00000504781 NOS1P29475 1434 aa14.35□□□□□ -0.11
DDX41-203ENST00000504781 SPATA31E1Q6ZUB1 1445 aa14.35□□□□□ -0.11
DDX41-203ENST00000504781 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
DDX41-203ENST00000504781 EIF4G2P78344 907 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX41-203ENST00000504781 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.12
DDX41-203ENST00000504781 MYO3AQ8NEV4 1616 aa14.32□□□□□ -0.12
DDX41-203ENST00000504781 KIF1BO60333 1816 aa14.31□□□□□ -0.12
DDX41-203ENST00000504781 TNRQ92752 1358 aa14.31□□□□□ -0.12
DDX41-203ENST00000504781 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
DDX41-203ENST00000504781 CLTCL1P53675 1640 aa14.3□□□□□ -0.12
DDX41-203ENST00000504781 IDI1Q13907 227 aa14.3□□□□□ -0.12
DDX41-203ENST00000504781 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
DDX41-203ENST00000504781 ZNF335Q9H4Z2 1342 aaPredicted RBP14.29□□□□□ -0.12
DDX41-203ENST00000504781 A2ML1A8K2U0 1454 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms