RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 ARHGEF5Q12774 1597 aa34.01■■■■□ 3.03
RNF4-205ENST00000504224 FBXO31Q5XUX0 539 aaPredicted RBP34■■■■□ 3.03
RNF4-205ENST00000504224 ZNF335Q9H4Z2 1342 aaPredicted RBP33.99■■■■□ 3.03
RNF4-205ENST00000504224 KDM5DQ9BY66 1539 aa33.99■■■■□ 3.03
RNF4-205ENST00000504224 KANK4Q5T7N3 995 aaPredicted RBP33.98■■■■□ 3.03
RNF4-205ENST00000504224 A2ML1A8K2U0 1454 aa33.98■■■■□ 3.03
RNF4-205ENST00000504224 TNRQ92752 1358 aa33.98■■■■□ 3.03
RNF4-205ENST00000504224 TCOF1Q13428 1488 aaKnown RBP33.97■■■■□ 3.03
RNF4-205ENST00000504224 IQSEC2Q5JU85 1478 aa33.95■■■■□ 3.02
RNF4-205ENST00000504224 PZPP20742 1482 aa33.94■■■■□ 3.02
RNF4-205ENST00000504224 FAM135AQ9P2D6 1515 aa33.93■■■■□ 3.02
RNF4-205ENST00000504224 DNMT1P26358 1616 aaKnown RBP33.91■■■■□ 3.02
RNF4-205ENST00000504224 MAP3K1Q13233 1512 aa33.89■■■■□ 3.02
RNF4-205ENST00000504224 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
RNF4-205ENST00000504224 MIA2Q96PC5 1412 aa33.85■■■■□ 3.01
RNF4-205ENST00000504224 DISP3Q9P2K9 1392 aa33.85■■■■□ 3.01
RNF4-205ENST00000504224 MAST1Q9Y2H9 1570 aa33.84■■■■□ 3.01
RNF4-205ENST00000504224 UBAP1LF5GYI3 381 aa33.82■■■■□ 3
RNF4-205ENST00000504224 APLP2Q06481 763 aa33.81■■■■□ 3
RNF4-205ENST00000504224 THEMISQ8N1K5 641 aaPredicted RBP33.79■■■■□ 3
RNF4-205ENST00000504224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.78■■■■□ 3
RNF4-205ENST00000504224 NLRP1Q9C000 1473 aa33.77■■■■□ 3
RNF4-205ENST00000504224 ANKLE2Q86XL3 938 aa33.77■■■■□ 3
RNF4-205ENST00000504224 RNF17Q9BXT8 1623 aaKnown RBP33.77■■■■□ 3
RNF4-205ENST00000504224 ABCC3O15438 1527 aa33.75■■■□□ 2.99
RNF4-205ENST00000504224 POLR1AO95602 1720 aaPredicted RBP33.73■■■□□ 2.99
RNF4-205ENST00000504224 UGGT1Q9NYU2 1555 aa33.73■■■□□ 2.99
RNF4-205ENST00000504224 NEURL4Q96JN8 1562 aa33.72■■■□□ 2.99
RNF4-205ENST00000504224 EIF2AK4Q9P2K8 1649 aaKnown RBP33.71■■■□□ 2.99
RNF4-205ENST00000504224 ZC3H13Q5T200 1668 aaKnown RBP33.69■■■□□ 2.98
RNF4-205ENST00000504224 DUOX2Q9NRD8 1548 aa33.69■■■□□ 2.98
RNF4-205ENST00000504224 KIF15Q9NS87 1388 aa33.67■■■□□ 2.98
RNF4-205ENST00000504224 RRP7BPQ9NSQ0 103 aa33.66■■■□□ 2.98
RNF4-205ENST00000504224 ERVK-7P63135 1459 aa33.65■■■□□ 2.98
RNF4-205ENST00000504224 MROH1Q8NDA8 1641 aa33.64■■■□□ 2.98
RNF4-205ENST00000504224 SPATA31D1Q6ZQQ2 1576 aa33.64■■■□□ 2.98
RNF4-205ENST00000504224 SHANK2Q9UPX8 1470 aa33.64■■■□□ 2.98
RNF4-205ENST00000504224 ABCC5O15440 1437 aa33.64■■■□□ 2.98
RNF4-205ENST00000504224 ILDR2Q71H61 639 aa33.64■■■□□ 2.98
RNF4-205ENST00000504224 NPHP4O75161 1426 aaPredicted RBP33.63■■■□□ 2.97
RNF4-205ENST00000504224 PTPN23Q9H3S7 1636 aa33.63■■■□□ 2.97
RNF4-205ENST00000504224 CPS1P31327 1500 aa33.62■■■□□ 2.97
RNF4-205ENST00000504224 SCAF1Q9H7N4 1312 aaKnown RBP33.61■■■□□ 2.97
RNF4-205ENST00000504224 CEP152O94986 1710 aa33.61■■■□□ 2.97
RNF4-205ENST00000504224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.59■■■□□ 2.974e-7■■□□□ 12.7
RNF4-205ENST00000504224 DEPDC5O75140 1603 aa33.57■■■□□ 2.97
RNF4-205ENST00000504224 MED14O60244 1454 aa33.57■■■□□ 2.97
RNF4-205ENST00000504224 DAPK1P53355 1430 aa33.57■■■□□ 2.96
RNF4-205ENST00000504224 PIP4K2BP78356 416 aa33.57■■■□□ 2.96
RNF4-205ENST00000504224 FGD6Q6ZV73 1430 aa33.56■■■□□ 2.96
RNF4-205ENST00000504224 ERBINQ96RT1 1412 aa33.56■■■□□ 2.96
RNF4-205ENST00000504224 CROCC2H7BZ55 1655 aa33.56■■■□□ 2.96
RNF4-205ENST00000504224 TOM1O60784 492 aa33.54■■■□□ 2.96
RNF4-205ENST00000504224 CHIC2Q9UKJ5 165 aa33.54■■■□□ 2.96
RNF4-205ENST00000504224 VWDEQ8N2E2 1590 aa33.54■■■□□ 2.96
RNF4-205ENST00000504224 CFAP65Q6ZU64 1925 aaKnown RBP33.52■■■□□ 2.96
RNF4-205ENST00000504224 PRDM15P57071 1507 aaPredicted RBP33.51■■■□□ 2.95
RNF4-205ENST00000504224 IQGAP1P46940 1657 aa33.51■■■□□ 2.95
RNF4-205ENST00000504224 KANK1Q14678 1352 aa33.49■■■□□ 2.95
RNF4-205ENST00000504224 ANKRD30AQ9BXX3 1397 aa33.47■■■□□ 2.95
RNF4-205ENST00000504224 ARHGAP31Q2M1Z3 1444 aa33.47■■■□□ 2.95
RNF4-205ENST00000504224 UBR1Q8IWV7 1749 aa33.45■■■□□ 2.94
RNF4-205ENST00000504224 HSPA1LP34931 641 aa33.44■■■□□ 2.94
RNF4-205ENST00000504224 SOCS7O14512 581 aa33.43■■■□□ 2.94
RNF4-205ENST00000504224 TXNDC2Q86VQ3 553 aa33.42■■■□□ 2.94
RNF4-205ENST00000504224 SCAF11Q99590 1463 aaKnown RBP33.42■■■□□ 2.94
RNF4-205ENST00000504224 STAG3Q9UJ98 1225 aa33.4■■■□□ 2.94
RNF4-205ENST00000504224 LTKP29376 864 aa33.39■■■□□ 2.94
RNF4-205ENST00000504224 FAM50AQ14320 339 aaKnown RBP33.39■■■□□ 2.94
RNF4-205ENST00000504224 EID1Q9Y6B2 187 aa33.38■■■□□ 2.93
RNF4-205ENST00000504224 ARHGAP23Q9P227 1491 aa33.35■■■□□ 2.93
RNF4-205ENST00000504224 SLIT1O75093 1534 aa33.34■■■□□ 2.93
RNF4-205ENST00000504224 LRRC7Q96NW7 1537 aa33.34■■■□□ 2.93
RNF4-205ENST00000504224 STRCP1A6NGW2 1772 aa33.32■■■□□ 2.92
RNF4-205ENST00000504224 PIK3C2BO00750 1634 aa33.31■■■□□ 2.92
RNF4-205ENST00000504224 LMTK2Q8IWU2 1503 aa33.3■■■□□ 2.92
RNF4-205ENST00000504224 IDI1Q13907 227 aa33.29■■■□□ 2.92
RNF4-205ENST00000504224 TMEM2Q9UHN6 1383 aa33.29■■■□□ 2.92
RNF4-205ENST00000504224 SENP3Q9H4L4 574 aaPredicted RBP33.28■■■□□ 2.92
RNF4-205ENST00000504224 SYNMO15061 1565 aa33.27■■■□□ 2.92
RNF4-205ENST00000504224 ADGRL2O95490 1459 aa33.27■■■□□ 2.92
RNF4-205ENST00000504224 ALKQ9UM73 1620 aa33.26■■■□□ 2.91
RNF4-205ENST00000504224 EFCAB6Q5THR3 1501 aa33.23■■■□□ 2.91
RNF4-205ENST00000504224 ANKRD50Q9ULJ7 1429 aa33.21■■■□□ 2.91
RNF4-205ENST00000504224 MED1Q15648 1581 aaPredicted RBP33.19■■■□□ 2.9
RNF4-205ENST00000504224 NOS1P29475 1434 aa33.19■■■□□ 2.9
RNF4-205ENST00000504224 KDM5AP29375 1690 aaKnown RBP33.15■■■□□ 2.9
RNF4-205ENST00000504224 SLC52A1Q9NWF4 448 aa33.15■■■□□ 2.9
RNF4-205ENST00000504224 SLC26A8Q96RN1 970 aa33.14■■■□□ 2.9
RNF4-205ENST00000504224 BCANQ96GW7 911 aa33.13■■■□□ 2.89
RNF4-205ENST00000504224 ADGRB3O60242 1522 aa33.12■■■□□ 2.89
RNF4-205ENST00000504224 PHF23Q9BUL5 403 aaPredicted RBP33.09■■■□□ 2.89
RNF4-205ENST00000504224 RPRD2Q5VT52 1461 aaKnown RBP33.08■■■□□ 2.89
RNF4-205ENST00000504224 KCNA6P17658 529 aa33.07■■■□□ 2.88
RNF4-205ENST00000504224 TMEM94Q12767 1356 aa33.05■■■□□ 2.88
RNF4-205ENST00000504224 PROSER2Q86WR7 435 aaPredicted RBP33.04■■■□□ 2.88
RNF4-205ENST00000504224 XIRP1Q702N8 1843 aaKnown RBP33.03■■■□□ 2.88
RNF4-205ENST00000504224 TET3O43151 1660 aa33.03■■■□□ 2.88
RNF4-205ENST00000504224 RBM33Q96EV2 1170 aaKnown RBP33.02■■■□□ 2.88
RNF4-205ENST00000504224 PPP1R15AO75807 674 aaPredicted RBP33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms