RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
SUB1-204ENST00000504016 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
SUB1-204ENST00000504016 E2F4Q16254 413 aa11.35□□□□□ -0.59
SUB1-204ENST00000504016 DDX12PQ92771 950 aa11.35□□□□□ -0.59
SUB1-204ENST00000504016 COL9A1P20849 921 aa11.34□□□□□ -0.59
SUB1-204ENST00000504016 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
SUB1-204ENST00000504016 PTPN5P54829 565 aa11.32□□□□□ -0.6
SUB1-204ENST00000504016 PROX2Q3B8N5 592 aa11.32□□□□□ -0.6
SUB1-204ENST00000504016 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
SUB1-204ENST00000504016 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
SUB1-204ENST00000504016 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
SUB1-204ENST00000504016 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
SUB1-204ENST00000504016 PDIA6Q15084 440 aa11.3□□□□□ -0.6
SUB1-204ENST00000504016 WNT2BQ93097 391 aa11.3□□□□□ -0.6
SUB1-204ENST00000504016 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
SUB1-204ENST00000504016 NBR1Q14596 966 aa11.28□□□□□ -0.6
SUB1-204ENST00000504016 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
SUB1-204ENST00000504016 MAP3K7O43318 606 aa11.25□□□□□ -0.61
SUB1-204ENST00000504016 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
SUB1-204ENST00000504016 ARIH1Q9Y4X5 557 aaPredicted RBP11.24□□□□□ -0.61
SUB1-204ENST00000504016 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
SUB1-204ENST00000504016 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
SUB1-204ENST00000504016 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
SUB1-204ENST00000504016 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.61
SUB1-204ENST00000504016 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.61
SUB1-204ENST00000504016 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
SUB1-204ENST00000504016 TSR1Q2NL82 804 aaKnown RBP11.2□□□□□ -0.62
SUB1-204ENST00000504016 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
SUB1-204ENST00000504016 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
SUB1-204ENST00000504016 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
SUB1-204ENST00000504016 BCAMP50895 628 aa11.15□□□□□ -0.62
SUB1-204ENST00000504016 PACS2Q86VP3 889 aa11.15□□□□□ -0.62
SUB1-204ENST00000504016 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
SUB1-204ENST00000504016 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
SUB1-204ENST00000504016 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
SUB1-204ENST00000504016 TSKSQ9UJT2 592 aa11.13□□□□□ -0.63
SUB1-204ENST00000504016 OSBPP22059 807 aa11.12□□□□□ -0.63
SUB1-204ENST00000504016 CERKQ8TCT0 537 aa11.12□□□□□ -0.63
SUB1-204ENST00000504016 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
SUB1-204ENST00000504016 PRSS12P56730 875 aa11.1□□□□□ -0.63
SUB1-204ENST00000504016 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
SUB1-204ENST00000504016 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
SUB1-204ENST00000504016 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
SUB1-204ENST00000504016 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
SUB1-204ENST00000504016 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
SUB1-204ENST00000504016 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
SUB1-204ENST00000504016 WBP1LQ9NX94 342 aa11.06□□□□□ -0.64
SUB1-204ENST00000504016 SMAPO00193 183 aa11.05□□□□□ -0.64
SUB1-204ENST00000504016 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
SUB1-204ENST00000504016 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
SUB1-204ENST00000504016 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
SUB1-204ENST00000504016 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
SUB1-204ENST00000504016 TATDN2Q93075 761 aa11.03□□□□□ -0.64
SUB1-204ENST00000504016 TSR3Q9UJK0 312 aaKnown RBP11.03□□□□□ -0.64
SUB1-204ENST00000504016 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
SUB1-204ENST00000504016 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
SUB1-204ENST00000504016 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
SUB1-204ENST00000504016 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
SUB1-204ENST00000504016 PPP4CP60510 307 aa10.99□□□□□ -0.65
SUB1-204ENST00000504016 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
SUB1-204ENST00000504016 SAMD7Q7Z3H4 446 aa10.99□□□□□ -0.65
SUB1-204ENST00000504016 A0A0G2JS52 829 aa10.98□□□□□ -0.65
SUB1-204ENST00000504016 ITGBL1O95965 494 aaPredicted RBP10.98□□□□□ -0.65
SUB1-204ENST00000504016 P3H3Q8IVL6 736 aa10.98□□□□□ -0.65
SUB1-204ENST00000504016 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
SUB1-204ENST00000504016 HDGFP51858 240 aaKnown RBP10.97□□□□□ -0.65
SUB1-204ENST00000504016 PLCB2Q00722 1185 aa10.97□□□□□ -0.65
SUB1-204ENST00000504016 PADI6Q6TGC4 694 aa10.96□□□□□ -0.65
SUB1-204ENST00000504016 KCNC4Q03721 635 aa10.95□□□□□ -0.66
SUB1-204ENST00000504016 RGS20O76081 388 aa10.94□□□□□ -0.66
SUB1-204ENST00000504016 RNF40O75150 1001 aa10.93□□□□□ -0.66
SUB1-204ENST00000504016 TTC13Q8NBP0 860 aa10.93□□□□□ -0.66
SUB1-204ENST00000504016 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
SUB1-204ENST00000504016 SEMA3EO15041 775 aa10.89□□□□□ -0.67
SUB1-204ENST00000504016 PTGDRQ13258 359 aa10.88□□□□□ -0.67
SUB1-204ENST00000504016 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
SUB1-204ENST00000504016 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
SUB1-204ENST00000504016 SLF2Q8IX21 1173 aa10.85□□□□□ -0.67
SUB1-204ENST00000504016 EYA1Q99502 592 aa10.85□□□□□ -0.67
SUB1-204ENST00000504016 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
SUB1-204ENST00000504016 NECTIN2Q92692 538 aa10.84□□□□□ -0.67
SUB1-204ENST00000504016 TJAP1Q5JTD0 557 aa10.83□□□□□ -0.68
SUB1-204ENST00000504016 MTRQ99707 1265 aa10.82□□□□□ -0.68
SUB1-204ENST00000504016 FCHSD2O94868 740 aa10.81□□□□□ -0.68
SUB1-204ENST00000504016 APLP1P51693 650 aa10.81□□□□□ -0.68
SUB1-204ENST00000504016 RBM46Q8TBY0 533 aaKnown RBP10.81□□□□□ -0.68
SUB1-204ENST00000504016 IL21Q9HBE4 155 aa10.81□□□□□ -0.68
SUB1-204ENST00000504016 IRX2Q9BZI1 471 aaPredicted RBP10.8□□□□□ -0.68
SUB1-204ENST00000504016 DNAJB2P25686 324 aa10.79□□□□□ -0.68
SUB1-204ENST00000504016 ADGRG1Q9Y653 693 aa10.79□□□□□ -0.68
SUB1-204ENST00000504016 FAM161AQ3B820 660 aa10.78□□□□□ -0.68
SUB1-204ENST00000504016 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
SUB1-204ENST00000504016 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.69
SUB1-204ENST00000504016 ZNF516Q92618 1163 aa10.76□□□□□ -0.69
SUB1-204ENST00000504016 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
SUB1-204ENST00000504016 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
SUB1-204ENST00000504016 COPS2P61201 443 aa10.74□□□□□ -0.69
SUB1-204ENST00000504016 PRR14Q9BWN1 585 aa10.74□□□□□ -0.69
SUB1-204ENST00000504016 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
SUB1-204ENST00000504016 HIC1Q14526 733 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms