RNA–Protein interactions for RNA: ENST00000503620.1

PAPD4-206, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-206ENST00000503620 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
PAPD4-206ENST00000503620 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
PAPD4-206ENST00000503620 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
PAPD4-206ENST00000503620 LRRIQ1Q96JM4 1722 aa14.1□□□□□ -0.15
PAPD4-206ENST00000503620 CDK11AQ9UQ88 783 aaPredicted RBP14.1□□□□□ -0.15
PAPD4-206ENST00000503620 LRP6O75581 1613 aa14.1□□□□□ -0.15
PAPD4-206ENST00000503620 UGGT1Q9NYU2 1555 aa14.09□□□□□ -0.15
PAPD4-206ENST00000503620 MIA2Q96PC5 1412 aa14.09□□□□□ -0.15
PAPD4-206ENST00000503620 THEMISQ8N1K5 641 aaPredicted RBP14.09□□□□□ -0.15
PAPD4-206ENST00000503620 NLRP1Q9C000 1473 aa14.09□□□□□ -0.15
PAPD4-206ENST00000503620 CLIP1P30622 1438 aa14.08□□□□□ -0.15
PAPD4-206ENST00000503620 ROBO1Q9Y6N7 1651 aa14.07□□□□□ -0.16
PAPD4-206ENST00000503620 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
PAPD4-206ENST00000503620 FAM135AQ9P2D6 1515 aa14.05□□□□□ -0.16
PAPD4-206ENST00000503620 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.166e-7■■■□□ 14.7
PAPD4-206ENST00000503620 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
PAPD4-206ENST00000503620 FMN1Q68DA7 1419 aa14.05□□□□□ -0.16
PAPD4-206ENST00000503620 KIAA1107Q9UPP5 1409 aa14.05□□□□□ -0.16
PAPD4-206ENST00000503620 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
PAPD4-206ENST00000503620 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
PAPD4-206ENST00000503620 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
PAPD4-206ENST00000503620 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
PAPD4-206ENST00000503620 ARHGAP35Q9NRY4 1499 aa14.02□□□□□ -0.16
PAPD4-206ENST00000503620 JCADQ9P266 1359 aa14.02□□□□□ -0.17
PAPD4-206ENST00000503620 TMEM94Q12767 1356 aa14□□□□□ -0.17
PAPD4-206ENST00000503620 COL16A1Q07092 1604 aaPredicted RBP14□□□□□ -0.17
PAPD4-206ENST00000503620 SETBP1Q9Y6X0 1596 aa14□□□□□ -0.17
PAPD4-206ENST00000503620 ADGBQ8N7X0 1667 aa13.99□□□□□ -0.17
PAPD4-206ENST00000503620 LTKP29376 864 aa13.99□□□□□ -0.17
PAPD4-206ENST00000503620 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
PAPD4-206ENST00000503620 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
PAPD4-206ENST00000503620 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
PAPD4-206ENST00000503620 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
PAPD4-206ENST00000503620 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
PAPD4-206ENST00000503620 SCAF11Q99590 1463 aaKnown RBP13.98□□□□□ -0.17
PAPD4-206ENST00000503620 EP400Q96L91 3159 aa13.97□□□□□ -0.17
PAPD4-206ENST00000503620 MBD5Q9P267 1494 aa13.96□□□□□ -0.17
PAPD4-206ENST00000503620 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.17
PAPD4-206ENST00000503620 LRRC9Q6ZRR7 1453 aa13.95□□□□□ -0.18
PAPD4-206ENST00000503620 RXRBP28702 533 aa13.95□□□□□ -0.18
PAPD4-206ENST00000503620 RGS12O14924 1447 aa13.95□□□□□ -0.18
PAPD4-206ENST00000503620 SLIT1O75093 1534 aa13.95□□□□□ -0.18
PAPD4-206ENST00000503620 PHLPP1O60346 1717 aa13.94□□□□□ -0.18
PAPD4-206ENST00000503620 SPATA31A6Q5VVP1 1343 aa13.93□□□□□ -0.18
PAPD4-206ENST00000503620 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
PAPD4-206ENST00000503620 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
PAPD4-206ENST00000503620 UBR1Q8IWV7 1749 aa13.93□□□□□ -0.18
PAPD4-206ENST00000503620 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
PAPD4-206ENST00000503620 RBM33Q96EV2 1170 aaKnown RBP13.92□□□□□ -0.18
PAPD4-206ENST00000503620 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
PAPD4-206ENST00000503620 KIF3BO15066 747 aa13.9□□□□□ -0.18
PAPD4-206ENST00000503620 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
PAPD4-206ENST00000503620 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
PAPD4-206ENST00000503620 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
PAPD4-206ENST00000503620 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.19
PAPD4-206ENST00000503620 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
PAPD4-206ENST00000503620 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
PAPD4-206ENST00000503620 KCNA6P17658 529 aa13.88□□□□□ -0.19
PAPD4-206ENST00000503620 CASKIN1Q8WXD9 1431 aa13.88□□□□□ -0.19
PAPD4-206ENST00000503620 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
PAPD4-206ENST00000503620 TET3O43151 1660 aa13.87□□□□□ -0.19
PAPD4-206ENST00000503620 SHPRHQ149N8 1683 aa13.87□□□□□ -0.19
PAPD4-206ENST00000503620 EEA1Q15075 1411 aa13.87□□□□□ -0.19
PAPD4-206ENST00000503620 DIP2AQ14689 1571 aa13.87□□□□□ -0.19
PAPD4-206ENST00000503620 ABCC3O15438 1527 aa13.86□□□□□ -0.19
PAPD4-206ENST00000503620 TXNDC2Q86VQ3 553 aa13.86□□□□□ -0.19
PAPD4-206ENST00000503620 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
PAPD4-206ENST00000503620 CAMSAP2Q08AD1 1489 aa13.86□□□□□ -0.19
PAPD4-206ENST00000503620 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
PAPD4-206ENST00000503620 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
PAPD4-206ENST00000503620 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
PAPD4-206ENST00000503620 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
PAPD4-206ENST00000503620 AFF2P51816 1311 aa13.84□□□□□ -0.19
PAPD4-206ENST00000503620 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.2
PAPD4-206ENST00000503620 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
PAPD4-206ENST00000503620 TMEM2Q9UHN6 1383 aa13.82□□□□□ -0.2
PAPD4-206ENST00000503620 MROH1Q8NDA8 1641 aa13.8□□□□□ -0.2
PAPD4-206ENST00000503620 MSH6P52701 1360 aa13.8□□□□□ -0.2
PAPD4-206ENST00000503620 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
PAPD4-206ENST00000503620 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
PAPD4-206ENST00000503620 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
PAPD4-206ENST00000503620 LRP5O75197 1615 aa13.78□□□□□ -0.2
PAPD4-206ENST00000503620 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.21
PAPD4-206ENST00000503620 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
PAPD4-206ENST00000503620 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
PAPD4-206ENST00000503620 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
PAPD4-206ENST00000503620 NUTM2BA6NNL0 878 aaPredicted RBP13.75□□□□□ -0.21
PAPD4-206ENST00000503620 NUTM2EB1AL46 878 aaPredicted RBP13.75□□□□□ -0.21
PAPD4-206ENST00000503620 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
PAPD4-206ENST00000503620 NUTM2AQ8IVF1 878 aaPredicted RBP13.75□□□□□ -0.21
PAPD4-206ENST00000503620 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
PAPD4-206ENST00000503620 PIK3C2BO00750 1634 aa13.73□□□□□ -0.21
PAPD4-206ENST00000503620 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
PAPD4-206ENST00000503620 CCDC141Q6ZP82 1450 aa13.73□□□□□ -0.21
PAPD4-206ENST00000503620 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
PAPD4-206ENST00000503620 SETD5Q9C0A6 1442 aa13.73□□□□□ -0.21
PAPD4-206ENST00000503620 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.22
PAPD4-206ENST00000503620 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
PAPD4-206ENST00000503620 EFCAB6Q5THR3 1501 aa13.68□□□□□ -0.22
PAPD4-206ENST00000503620 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms