RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
COPB2-202ENST00000502734 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
COPB2-202ENST00000502734 NCOA1Q15788 1441 aa14.13□□□□□ -0.15
COPB2-202ENST00000502734 MIA2Q96PC5 1412 aa14.12□□□□□ -0.15
COPB2-202ENST00000502734 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
COPB2-202ENST00000502734 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
COPB2-202ENST00000502734 ARHGEF5Q12774 1597 aa14.1□□□□□ -0.15
COPB2-202ENST00000502734 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.15
COPB2-202ENST00000502734 TNRQ92752 1358 aa14.08□□□□□ -0.16
COPB2-202ENST00000502734 THEMISQ8N1K5 641 aaPredicted RBP14.06□□□□□ -0.16
COPB2-202ENST00000502734 RRP7BPQ9NSQ0 103 aa14.06□□□□□ -0.16
COPB2-202ENST00000502734 A2ML1A8K2U0 1454 aa14.05□□□□□ -0.16
COPB2-202ENST00000502734 PLA2R1Q13018 1463 aa14.05□□□□□ -0.16
COPB2-202ENST00000502734 ANKLE2Q86XL3 938 aa14.04□□□□□ -0.16
COPB2-202ENST00000502734 PZPP20742 1482 aa14.04□□□□□ -0.16
COPB2-202ENST00000502734 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
COPB2-202ENST00000502734 ZNF335Q9H4Z2 1342 aaPredicted RBP14.03□□□□□ -0.16
COPB2-202ENST00000502734 FAM135AQ9P2D6 1515 aa14.03□□□□□ -0.16
COPB2-202ENST00000502734 CEP170BQ9Y4F5 1589 aaPredicted RBP14.03□□□□□ -0.16
COPB2-202ENST00000502734 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
COPB2-202ENST00000502734 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.16
COPB2-202ENST00000502734 ABCC5O15440 1437 aa14.02□□□□□ -0.16
COPB2-202ENST00000502734 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
COPB2-202ENST00000502734 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
COPB2-202ENST00000502734 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
COPB2-202ENST00000502734 KIF15Q9NS87 1388 aa14□□□□□ -0.17
COPB2-202ENST00000502734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.172e-10■■□□□ 12.3
COPB2-202ENST00000502734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
COPB2-202ENST00000502734 DNMT1P26358 1616 aaKnown RBP13.99□□□□□ -0.17
COPB2-202ENST00000502734 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
COPB2-202ENST00000502734 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
COPB2-202ENST00000502734 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
COPB2-202ENST00000502734 NLRP1Q9C000 1473 aa13.98□□□□□ -0.17
COPB2-202ENST00000502734 UBAP1LF5GYI3 381 aa13.97□□□□□ -0.17
COPB2-202ENST00000502734 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
COPB2-202ENST00000502734 DAPK1P53355 1430 aa13.97□□□□□ -0.17
COPB2-202ENST00000502734 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.17
COPB2-202ENST00000502734 ABCC3O15438 1527 aa13.96□□□□□ -0.17
COPB2-202ENST00000502734 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
COPB2-202ENST00000502734 PTPN23Q9H3S7 1636 aa13.96□□□□□ -0.17
COPB2-202ENST00000502734 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
COPB2-202ENST00000502734 RNF17Q9BXT8 1623 aaKnown RBP13.94□□□□□ -0.18
COPB2-202ENST00000502734 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
COPB2-202ENST00000502734 UGGT1Q9NYU2 1555 aa13.94□□□□□ -0.18
COPB2-202ENST00000502734 KANK1Q14678 1352 aa13.94□□□□□ -0.18
COPB2-202ENST00000502734 EIF2AK4Q9P2K8 1649 aaKnown RBP13.93□□□□□ -0.18
COPB2-202ENST00000502734 ERVK-7P63135 1459 aa13.92□□□□□ -0.18
COPB2-202ENST00000502734 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
COPB2-202ENST00000502734 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
COPB2-202ENST00000502734 TXNDC2Q86VQ3 553 aa13.91□□□□□ -0.18
COPB2-202ENST00000502734 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
COPB2-202ENST00000502734 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
COPB2-202ENST00000502734 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.19
COPB2-202ENST00000502734 MED14O60244 1454 aa13.89□□□□□ -0.19
COPB2-202ENST00000502734 TOM1O60784 492 aa13.89□□□□□ -0.19
COPB2-202ENST00000502734 LTKP29376 864 aa13.89□□□□□ -0.19
COPB2-202ENST00000502734 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
COPB2-202ENST00000502734 CFAP65Q6ZU64 1925 aaKnown RBP13.89□□□□□ -0.19
COPB2-202ENST00000502734 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
COPB2-202ENST00000502734 IDI1Q13907 227 aa13.88□□□□□ -0.19
COPB2-202ENST00000502734 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
COPB2-202ENST00000502734 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
COPB2-202ENST00000502734 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
COPB2-202ENST00000502734 CPS1P31327 1500 aa13.85□□□□□ -0.19
COPB2-202ENST00000502734 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
COPB2-202ENST00000502734 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
COPB2-202ENST00000502734 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
COPB2-202ENST00000502734 CEP152O94986 1710 aa13.84□□□□□ -0.19
COPB2-202ENST00000502734 ANKRD50Q9ULJ7 1429 aa13.84□□□□□ -0.19
COPB2-202ENST00000502734 DEPDC5O75140 1603 aa13.84□□□□□ -0.19
COPB2-202ENST00000502734 PPARGC1BQ86YN6 1023 aaKnown RBP13.84□□□□□ -0.19
COPB2-202ENST00000502734 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
COPB2-202ENST00000502734 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
COPB2-202ENST00000502734 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
COPB2-202ENST00000502734 LMTK2Q8IWU2 1503 aa13.82□□□□□ -0.2
COPB2-202ENST00000502734 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
COPB2-202ENST00000502734 TMEM2Q9UHN6 1383 aa13.82□□□□□ -0.2
COPB2-202ENST00000502734 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
COPB2-202ENST00000502734 VWDEQ8N2E2 1590 aa13.81□□□□□ -0.2
COPB2-202ENST00000502734 ARHGAP23Q9P227 1491 aa13.8□□□□□ -0.2
COPB2-202ENST00000502734 HSPA1LP34931 641 aa13.8□□□□□ -0.2
COPB2-202ENST00000502734 ITGAEP38570 1179 aa13.8□□□□□ -0.2
COPB2-202ENST00000502734 SLIT1O75093 1534 aa13.8□□□□□ -0.2
COPB2-202ENST00000502734 HDGFP51858 240 aaKnown RBP13.79□□□□□ -0.2
COPB2-202ENST00000502734 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
COPB2-202ENST00000502734 NOS1P29475 1434 aa13.79□□□□□ -0.2
COPB2-202ENST00000502734 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
COPB2-202ENST00000502734 ROCK1Q13464 1354 aa13.78□□□□□ -0.2
COPB2-202ENST00000502734 IQGAP1P46940 1657 aa13.78□□□□□ -0.2
COPB2-202ENST00000502734 BCANQ96GW7 911 aa13.77□□□□□ -0.21
COPB2-202ENST00000502734 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
COPB2-202ENST00000502734 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
COPB2-202ENST00000502734 KCNA6P17658 529 aa13.76□□□□□ -0.21
COPB2-202ENST00000502734 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
COPB2-202ENST00000502734 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
COPB2-202ENST00000502734 CHGAP10645 457 aaKnown RBP13.74□□□□□ -0.21
COPB2-202ENST00000502734 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
COPB2-202ENST00000502734 NUP155O75694 1391 aa13.73□□□□□ -0.21
COPB2-202ENST00000502734 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
COPB2-202ENST00000502734 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms