RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
YIPF3-209ENST00000500090 ITGAEP38570 1179 aa18.62■□□□□ 0.57
YIPF3-209ENST00000500090 FAM135AQ9P2D6 1515 aa18.62■□□□□ 0.57
YIPF3-209ENST00000500090 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
YIPF3-209ENST00000500090 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
YIPF3-209ENST00000500090 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
YIPF3-209ENST00000500090 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
YIPF3-209ENST00000500090 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
YIPF3-209ENST00000500090 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
YIPF3-209ENST00000500090 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.56
YIPF3-209ENST00000500090 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
YIPF3-209ENST00000500090 KDM5DQ9BY66 1539 aa18.56■□□□□ 0.56
YIPF3-209ENST00000500090 CLTCQ00610 1675 aaKnown RBP18.56■□□□□ 0.56
YIPF3-209ENST00000500090 C3P01024 1663 aa18.55■□□□□ 0.56
YIPF3-209ENST00000500090 KANK1Q14678 1352 aa18.54■□□□□ 0.56
YIPF3-209ENST00000500090 NPATQ14207 1427 aa18.53■□□□□ 0.56
YIPF3-209ENST00000500090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
YIPF3-209ENST00000500090 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
YIPF3-209ENST00000500090 MROH1Q8NDA8 1641 aa18.51■□□□□ 0.55
YIPF3-209ENST00000500090 ABCC3O15438 1527 aa18.5■□□□□ 0.55
YIPF3-209ENST00000500090 DEPDC5O75140 1603 aa18.5■□□□□ 0.55
YIPF3-209ENST00000500090 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
YIPF3-209ENST00000500090 PZPP20742 1482 aa18.48■□□□□ 0.55
YIPF3-209ENST00000500090 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
YIPF3-209ENST00000500090 LMTK3Q96Q04 1460 aa18.46■□□□□ 0.55
YIPF3-209ENST00000500090 PREX1Q8TCU6 1659 aa18.45■□□□□ 0.54
YIPF3-209ENST00000500090 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
YIPF3-209ENST00000500090 HFM1A2PYH4 1435 aa18.44■□□□□ 0.54
YIPF3-209ENST00000500090 NAIPQ13075 1403 aa18.44■□□□□ 0.54
YIPF3-209ENST00000500090 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
YIPF3-209ENST00000500090 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
YIPF3-209ENST00000500090 LMTK2Q8IWU2 1503 aa18.44■□□□□ 0.54
YIPF3-209ENST00000500090 CEP152O94986 1710 aa18.42■□□□□ 0.54
YIPF3-209ENST00000500090 UNC13BO14795 1591 aa18.41■□□□□ 0.54
YIPF3-209ENST00000500090 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
YIPF3-209ENST00000500090 TNRQ92752 1358 aa18.41■□□□□ 0.54
YIPF3-209ENST00000500090 NUP155O75694 1391 aa18.4■□□□□ 0.54
YIPF3-209ENST00000500090 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
YIPF3-209ENST00000500090 HSPA2P54652 639 aa18.38■□□□□ 0.53
YIPF3-209ENST00000500090 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
YIPF3-209ENST00000500090 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
YIPF3-209ENST00000500090 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
YIPF3-209ENST00000500090 EFCAB6Q5THR3 1501 aa18.35■□□□□ 0.53
YIPF3-209ENST00000500090 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
YIPF3-209ENST00000500090 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
YIPF3-209ENST00000500090 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
YIPF3-209ENST00000500090 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
YIPF3-209ENST00000500090 A2ML1A8K2U0 1454 aa18.34■□□□□ 0.53
YIPF3-209ENST00000500090 TET3O43151 1660 aa18.34■□□□□ 0.53
YIPF3-209ENST00000500090 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
YIPF3-209ENST00000500090 CEP170BQ9Y4F5 1589 aaPredicted RBP18.33■□□□□ 0.52
YIPF3-209ENST00000500090 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
YIPF3-209ENST00000500090 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
YIPF3-209ENST00000500090 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
YIPF3-209ENST00000500090 NOS1P29475 1434 aa18.31■□□□□ 0.52
YIPF3-209ENST00000500090 SLC52A1Q9NWF4 448 aa18.3■□□□□ 0.52
YIPF3-209ENST00000500090 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
YIPF3-209ENST00000500090 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
YIPF3-209ENST00000500090 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
YIPF3-209ENST00000500090 UGGT1Q9NYU2 1555 aa18.26■□□□□ 0.51
YIPF3-209ENST00000500090 PKD2Q13563 968 aa18.26■□□□□ 0.51
YIPF3-209ENST00000500090 HRCP23327 699 aa18.25■□□□□ 0.51
YIPF3-209ENST00000500090 IDI1Q13907 227 aa18.25■□□□□ 0.51
YIPF3-209ENST00000500090 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
YIPF3-209ENST00000500090 E9PCH4 1651 aa18.25■□□□□ 0.51
YIPF3-209ENST00000500090 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
YIPF3-209ENST00000500090 SYNMO15061 1565 aa18.22■□□□□ 0.51
YIPF3-209ENST00000500090 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
YIPF3-209ENST00000500090 STRCQ7RTU9 1775 aa18.22■□□□□ 0.51
YIPF3-209ENST00000500090 RAB3GAP2Q9H2M9 1393 aa18.21■□□□□ 0.51
YIPF3-209ENST00000500090 PTPRTO14522 1441 aa18.2■□□□□ 0.5
YIPF3-209ENST00000500090 NCKAP5LQ9HCH0 1330 aa18.2■□□□□ 0.5
YIPF3-209ENST00000500090 MPHOSPH9Q99550 1183 aa18.19■□□□□ 0.5
YIPF3-209ENST00000500090 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
YIPF3-209ENST00000500090 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
YIPF3-209ENST00000500090 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
YIPF3-209ENST00000500090 EID1Q9Y6B2 187 aa18.16■□□□□ 0.5
YIPF3-209ENST00000500090 TMEM2Q9UHN6 1383 aa18.15■□□□□ 0.5
YIPF3-209ENST00000500090 SLIT1O75093 1534 aa18.14■□□□□ 0.49
YIPF3-209ENST00000500090 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
YIPF3-209ENST00000500090 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-209ENST00000500090 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
YIPF3-209ENST00000500090 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
YIPF3-209ENST00000500090 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
YIPF3-209ENST00000500090 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
YIPF3-209ENST00000500090 CHGAP10645 457 aaKnown RBP18.12■□□□□ 0.49
YIPF3-209ENST00000500090 MED14O60244 1454 aa18.12■□□□□ 0.49
YIPF3-209ENST00000500090 TRPM2O94759 1503 aa18.12■□□□□ 0.49
YIPF3-209ENST00000500090 LTKP29376 864 aa18.11■□□□□ 0.49
YIPF3-209ENST00000500090 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
YIPF3-209ENST00000500090 POLR1AO95602 1720 aaPredicted RBP18.11■□□□□ 0.49
YIPF3-209ENST00000500090 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
YIPF3-209ENST00000500090 FOXD1Q16676 465 aa18.09■□□□□ 0.49
YIPF3-209ENST00000500090 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
YIPF3-209ENST00000500090 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.49
YIPF3-209ENST00000500090 NEURL4Q96JN8 1562 aa18.08■□□□□ 0.48
YIPF3-209ENST00000500090 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
YIPF3-209ENST00000500090 RIMS2Q9UQ26 1411 aa18.05■□□□□ 0.48
YIPF3-209ENST00000500090 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
YIPF3-209ENST00000500090 MYO5BQ9ULV0 1848 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms