RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 SEC24BO95487 1268 aa12.4□□□□□ -0.42
GARNL3-222ENST00000498801 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
GARNL3-222ENST00000498801 EEA1Q15075 1411 aa12.37□□□□□ -0.43
GARNL3-222ENST00000498801 DPYSL4O14531 572 aa12.37□□□□□ -0.43
GARNL3-222ENST00000498801 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
GARNL3-222ENST00000498801 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
GARNL3-222ENST00000498801 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-222ENST00000498801 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
GARNL3-222ENST00000498801 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
GARNL3-222ENST00000498801 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
GARNL3-222ENST00000498801 C7P10643 843 aa12.34□□□□□ -0.43
GARNL3-222ENST00000498801 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
GARNL3-222ENST00000498801 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
GARNL3-222ENST00000498801 PDIA6Q15084 440 aa12.33□□□□□ -0.44
GARNL3-222ENST00000498801 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
GARNL3-222ENST00000498801 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
GARNL3-222ENST00000498801 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
GARNL3-222ENST00000498801 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-222ENST00000498801 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
GARNL3-222ENST00000498801 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
GARNL3-222ENST00000498801 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
GARNL3-222ENST00000498801 RAPGEF2Q9Y4G8 1499 aa12.3□□□□□ -0.44
GARNL3-222ENST00000498801 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-222ENST00000498801 KIAA0586Q9BVV6 1533 aa12.29□□□□□ -0.44
GARNL3-222ENST00000498801 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
GARNL3-222ENST00000498801 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
GARNL3-222ENST00000498801 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
GARNL3-222ENST00000498801 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
GARNL3-222ENST00000498801 RBM26Q5T8P6 1007 aaKnown RBP12.24□□□□□ -0.45
GARNL3-222ENST00000498801 C3orf67Q6ZVT6 689 aa12.23□□□□□ -0.45
GARNL3-222ENST00000498801 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
GARNL3-222ENST00000498801 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
GARNL3-222ENST00000498801 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
GARNL3-222ENST00000498801 ZMYND10O75800 440 aa12.21□□□□□ -0.45
GARNL3-222ENST00000498801 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
GARNL3-222ENST00000498801 KIF21BO75037 1637 aa12.21□□□□□ -0.46
GARNL3-222ENST00000498801 IQGAP2Q13576 1575 aa12.21□□□□□ -0.46
GARNL3-222ENST00000498801 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
GARNL3-222ENST00000498801 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
GARNL3-222ENST00000498801 SLC24A3Q9HC58 644 aa12.19□□□□□ -0.46
GARNL3-222ENST00000498801 PRG4Q92954 1404 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-222ENST00000498801 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
GARNL3-222ENST00000498801 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
GARNL3-222ENST00000498801 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
GARNL3-222ENST00000498801 DISP1Q96F81 1524 aa12.14□□□□□ -0.47
GARNL3-222ENST00000498801 GRXCR2A6NFK2 248 aa12.13□□□□□ -0.47
GARNL3-222ENST00000498801 FAM9AQ8IZU1 332 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-222ENST00000498801 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
GARNL3-222ENST00000498801 TBC1D12O60347 775 aa12.11□□□□□ -0.47
GARNL3-222ENST00000498801 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-222ENST00000498801 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
GARNL3-222ENST00000498801 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
GARNL3-222ENST00000498801 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
GARNL3-222ENST00000498801 GOLGA3Q08378 1498 aa12.1□□□□□ -0.47
GARNL3-222ENST00000498801 EVI5O60447 810 aa12.1□□□□□ -0.47
GARNL3-222ENST00000498801 PTGER2P43116 358 aa12.1□□□□□ -0.47
GARNL3-222ENST00000498801 KIAA0556O60303 1618 aa12.1□□□□□ -0.47
GARNL3-222ENST00000498801 GPR37O15354 613 aa12.09□□□□□ -0.47
GARNL3-222ENST00000498801 SLC34A2O95436 690 aa12.08□□□□□ -0.48
GARNL3-222ENST00000498801 DDX12PQ92771 950 aa12.08□□□□□ -0.48
GARNL3-222ENST00000498801 SAMD9Q5K651 1589 aa12.08□□□□□ -0.48
GARNL3-222ENST00000498801 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
GARNL3-222ENST00000498801 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-222ENST00000498801 OSBPP22059 807 aa12.07□□□□□ -0.48
GARNL3-222ENST00000498801 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
GARNL3-222ENST00000498801 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
GARNL3-222ENST00000498801 TMEM132AQ24JP5 1023 aa12.05□□□□□ -0.48
GARNL3-222ENST00000498801 UHRF1BP1LA0JNW5 1464 aa12.05□□□□□ -0.48
GARNL3-222ENST00000498801 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
GARNL3-222ENST00000498801 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
GARNL3-222ENST00000498801 AK7Q96M32 723 aa12.03□□□□□ -0.48
GARNL3-222ENST00000498801 PTPRGP23470 1445 aa12.03□□□□□ -0.48
GARNL3-222ENST00000498801 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
GARNL3-222ENST00000498801 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
GARNL3-222ENST00000498801 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
GARNL3-222ENST00000498801 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
GARNL3-222ENST00000498801 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
GARNL3-222ENST00000498801 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
GARNL3-222ENST00000498801 UACAQ9BZF9 1416 aa11.99□□□□□ -0.49
GARNL3-222ENST00000498801 MAPKBP1O60336 1514 aa11.99□□□□□ -0.49
GARNL3-222ENST00000498801 ABCA8O94911 1581 aa11.98□□□□□ -0.49
GARNL3-222ENST00000498801 KDM5BQ9UGL1 1544 aa11.97□□□□□ -0.49
GARNL3-222ENST00000498801 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
GARNL3-222ENST00000498801 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
GARNL3-222ENST00000498801 FCHSD2O94868 740 aa11.95□□□□□ -0.5
GARNL3-222ENST00000498801 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
GARNL3-222ENST00000498801 GNPATO15228 680 aa11.94□□□□□ -0.5
GARNL3-222ENST00000498801 PHF14O94880 888 aa11.94□□□□□ -0.5
GARNL3-222ENST00000498801 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
GARNL3-222ENST00000498801 HIC1Q14526 733 aa11.94□□□□□ -0.5
GARNL3-222ENST00000498801 PLB1Q6P1J6 1458 aa11.94□□□□□ -0.5
GARNL3-222ENST00000498801 TRIM66O15016 1216 aa11.93□□□□□ -0.5
GARNL3-222ENST00000498801 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
GARNL3-222ENST00000498801 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
GARNL3-222ENST00000498801 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-222ENST00000498801 EPAS1Q99814 870 aa11.92□□□□□ -0.5
GARNL3-222ENST00000498801 MINK1Q8N4C8 1332 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-222ENST00000498801 PTGDRQ13258 359 aa11.91□□□□□ -0.5
GARNL3-222ENST00000498801 PCDHGA10Q9Y5H3 936 aa11.91□□□□□ -0.5
GARNL3-222ENST00000498801 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms