RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
CTTN-208ENST00000498223 ERBINQ96RT1 1412 aa17.12■□□□□ 0.33
CTTN-208ENST00000498223 FER1L4A9Z1Z3 1794 aa17.11■□□□□ 0.33
CTTN-208ENST00000498223 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
CTTN-208ENST00000498223 NAIPQ13075 1403 aa17.11■□□□□ 0.33
CTTN-208ENST00000498223 GGT6Q6P531 493 aa17.1■□□□□ 0.33
CTTN-208ENST00000498223 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
CTTN-208ENST00000498223 AGLP35573 1532 aa17.1■□□□□ 0.33
CTTN-208ENST00000498223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.333e-7■■■□□ 16.9
CTTN-208ENST00000498223 SETD5Q9C0A6 1442 aa17.08■□□□□ 0.32
CTTN-208ENST00000498223 HSPA2P54652 639 aa17.08■□□□□ 0.32
CTTN-208ENST00000498223 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
CTTN-208ENST00000498223 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
CTTN-208ENST00000498223 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
CTTN-208ENST00000498223 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
CTTN-208ENST00000498223 CEP152O94986 1710 aa17.05■□□□□ 0.32
CTTN-208ENST00000498223 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
CTTN-208ENST00000498223 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
CTTN-208ENST00000498223 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
CTTN-208ENST00000498223 KANK1Q14678 1352 aa17.03■□□□□ 0.32
CTTN-208ENST00000498223 UNC13BO14795 1591 aa17.02■□□□□ 0.32
CTTN-208ENST00000498223 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
CTTN-208ENST00000498223 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
CTTN-208ENST00000498223 CNTLNQ9NXG0 1405 aa17.01■□□□□ 0.31
CTTN-208ENST00000498223 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
CTTN-208ENST00000498223 ZC3H13Q5T200 1668 aaKnown RBP17■□□□□ 0.31
CTTN-208ENST00000498223 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
CTTN-208ENST00000498223 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
CTTN-208ENST00000498223 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
CTTN-208ENST00000498223 NUP155O75694 1391 aa16.99■□□□□ 0.31
CTTN-208ENST00000498223 PREX1Q8TCU6 1659 aa16.98■□□□□ 0.31
CTTN-208ENST00000498223 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
CTTN-208ENST00000498223 KDM5DQ9BY66 1539 aa16.97■□□□□ 0.31
CTTN-208ENST00000498223 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
CTTN-208ENST00000498223 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
CTTN-208ENST00000498223 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.3
CTTN-208ENST00000498223 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
CTTN-208ENST00000498223 ABCC3O15438 1527 aa16.94■□□□□ 0.3
CTTN-208ENST00000498223 FAM135AQ9P2D6 1515 aa16.94■□□□□ 0.3
CTTN-208ENST00000498223 TET3O43151 1660 aa16.94■□□□□ 0.3
CTTN-208ENST00000498223 C3P01024 1663 aa16.93■□□□□ 0.3
CTTN-208ENST00000498223 HRCP23327 699 aa16.92■□□□□ 0.3
CTTN-208ENST00000498223 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
CTTN-208ENST00000498223 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
CTTN-208ENST00000498223 VWDEQ8N2E2 1590 aa16.92■□□□□ 0.3
CTTN-208ENST00000498223 NPATQ14207 1427 aa16.91■□□□□ 0.3
CTTN-208ENST00000498223 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
CTTN-208ENST00000498223 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.3
CTTN-208ENST00000498223 E9PCH4 1651 aa16.89■□□□□ 0.29
CTTN-208ENST00000498223 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
CTTN-208ENST00000498223 PZPP20742 1482 aa16.87■□□□□ 0.29
CTTN-208ENST00000498223 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
CTTN-208ENST00000498223 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
CTTN-208ENST00000498223 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
CTTN-208ENST00000498223 PKD2Q13563 968 aa16.86■□□□□ 0.29
CTTN-208ENST00000498223 PTPRTO14522 1441 aa16.85■□□□□ 0.29
CTTN-208ENST00000498223 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
CTTN-208ENST00000498223 STRCQ7RTU9 1775 aa16.84■□□□□ 0.29
CTTN-208ENST00000498223 ARHGAP31Q2M1Z3 1444 aa16.81■□□□□ 0.28
CTTN-208ENST00000498223 FOXD1Q16676 465 aa16.81■□□□□ 0.28
CTTN-208ENST00000498223 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
CTTN-208ENST00000498223 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
CTTN-208ENST00000498223 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
CTTN-208ENST00000498223 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.27
CTTN-208ENST00000498223 TNRQ92752 1358 aa16.77■□□□□ 0.27
CTTN-208ENST00000498223 KIF1BO60333 1816 aa16.76■□□□□ 0.27
CTTN-208ENST00000498223 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
CTTN-208ENST00000498223 MYO3AQ8NEV4 1616 aa16.75■□□□□ 0.27
CTTN-208ENST00000498223 CEP170BQ9Y4F5 1589 aaPredicted RBP16.75■□□□□ 0.27
CTTN-208ENST00000498223 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
CTTN-208ENST00000498223 SYNMO15061 1565 aa16.74■□□□□ 0.27
CTTN-208ENST00000498223 MYO5BQ9ULV0 1848 aa16.74■□□□□ 0.27
CTTN-208ENST00000498223 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
CTTN-208ENST00000498223 NOS1P29475 1434 aa16.72■□□□□ 0.27
CTTN-208ENST00000498223 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
CTTN-208ENST00000498223 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
CTTN-208ENST00000498223 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
CTTN-208ENST00000498223 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
CTTN-208ENST00000498223 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
CTTN-208ENST00000498223 TRPM2O94759 1503 aa16.71■□□□□ 0.27
CTTN-208ENST00000498223 CLTCL1P53675 1640 aa16.71■□□□□ 0.27
CTTN-208ENST00000498223 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
CTTN-208ENST00000498223 UGGT1Q9NYU2 1555 aa16.7■□□□□ 0.26
CTTN-208ENST00000498223 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
CTTN-208ENST00000498223 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
CTTN-208ENST00000498223 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
CTTN-208ENST00000498223 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
CTTN-208ENST00000498223 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
CTTN-208ENST00000498223 IDI1Q13907 227 aa16.67■□□□□ 0.26
CTTN-208ENST00000498223 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
CTTN-208ENST00000498223 UBR1Q8IWV7 1749 aa16.66■□□□□ 0.26
CTTN-208ENST00000498223 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
CTTN-208ENST00000498223 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
CTTN-208ENST00000498223 ZNF326Q5BKZ1 582 aaKnown RBP16.63■□□□□ 0.25
CTTN-208ENST00000498223 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
CTTN-208ENST00000498223 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
CTTN-208ENST00000498223 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
CTTN-208ENST00000498223 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
CTTN-208ENST00000498223 THEMISQ8N1K5 641 aaPredicted RBP16.61■□□□□ 0.25
CTTN-208ENST00000498223 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms