RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 MROH1Q8NDA8 1641 aa23.59■■□□□ 1.37
PTK7-220ENST00000497957 FOXD1Q16676 465 aa23.59■■□□□ 1.37
PTK7-220ENST00000497957 EIF2AK4Q9P2K8 1649 aaKnown RBP23.59■■□□□ 1.37
PTK7-220ENST00000497957 ATP10AO60312 1499 aa23.58■■□□□ 1.37
PTK7-220ENST00000497957 MPHOSPH9Q99550 1183 aa23.58■■□□□ 1.37
PTK7-220ENST00000497957 KDM5DQ9BY66 1539 aa23.58■■□□□ 1.36
PTK7-220ENST00000497957 DEPDC5O75140 1603 aa23.56■■□□□ 1.36
PTK7-220ENST00000497957 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
PTK7-220ENST00000497957 RNF17Q9BXT8 1623 aaKnown RBP23.53■■□□□ 1.36
PTK7-220ENST00000497957 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
PTK7-220ENST00000497957 IQGAP3Q86VI3 1631 aa23.52■■□□□ 1.36
PTK7-220ENST00000497957 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
PTK7-220ENST00000497957 VWDEQ8N2E2 1590 aa23.5■■□□□ 1.35
PTK7-220ENST00000497957 REREQ9P2R6 1566 aa23.5■■□□□ 1.35
PTK7-220ENST00000497957 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
PTK7-220ENST00000497957 PKD2Q13563 968 aa23.48■■□□□ 1.35
PTK7-220ENST00000497957 GGT6Q6P531 493 aa23.48■■□□□ 1.35
PTK7-220ENST00000497957 SIN3AQ96ST3 1273 aa23.48■■□□□ 1.35
PTK7-220ENST00000497957 CEP152O94986 1710 aa23.47■■□□□ 1.35
PTK7-220ENST00000497957 AGLP35573 1532 aa23.44■■□□□ 1.34
PTK7-220ENST00000497957 MLECQ14165 292 aa23.42■■□□□ 1.34
PTK7-220ENST00000497957 ACIN1Q9UKV3 1341 aaKnown RBP23.41■■□□□ 1.34
PTK7-220ENST00000497957 ABCC3O15438 1527 aa23.4■■□□□ 1.34
PTK7-220ENST00000497957 E9PCH4 1651 aa23.4■■□□□ 1.34
PTK7-220ENST00000497957 KANK1Q14678 1352 aa23.4■■□□□ 1.34
PTK7-220ENST00000497957 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
PTK7-220ENST00000497957 TET3O43151 1660 aa23.39■■□□□ 1.34
PTK7-220ENST00000497957 NEUROD1Q13562 356 aa23.39■■□□□ 1.33
PTK7-220ENST00000497957 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
PTK7-220ENST00000497957 LMTK2Q8IWU2 1503 aa23.36■■□□□ 1.33
PTK7-220ENST00000497957 PLA2R1Q13018 1463 aa23.36■■□□□ 1.33
PTK7-220ENST00000497957 ARID4BQ4LE39 1312 aaPredicted RBP23.35■■□□□ 1.33
PTK7-220ENST00000497957 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.33
PTK7-220ENST00000497957 CAMSAP1Q5T5Y3 1602 aa23.33■■□□□ 1.32
PTK7-220ENST00000497957 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.32
PTK7-220ENST00000497957 CLTCQ00610 1675 aaKnown RBP23.31■■□□□ 1.32
PTK7-220ENST00000497957 NPATQ14207 1427 aa23.28■■□□□ 1.32
PTK7-220ENST00000497957 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
PTK7-220ENST00000497957 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
PTK7-220ENST00000497957 CFAP65Q6ZU64 1925 aaKnown RBP23.25■■□□□ 1.31
PTK7-220ENST00000497957 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
PTK7-220ENST00000497957 UGGT1Q9NYU2 1555 aa23.24■■□□□ 1.31
PTK7-220ENST00000497957 PTPRTO14522 1441 aa23.24■■□□□ 1.31
PTK7-220ENST00000497957 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
PTK7-220ENST00000497957 CLTCL1P53675 1640 aa23.21■■□□□ 1.31
PTK7-220ENST00000497957 TRPM2O94759 1503 aa23.2■■□□□ 1.3
PTK7-220ENST00000497957 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
PTK7-220ENST00000497957 ARHGAP31Q2M1Z3 1444 aa23.18■■□□□ 1.3
PTK7-220ENST00000497957 SYNMO15061 1565 aa23.18■■□□□ 1.3
PTK7-220ENST00000497957 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
PTK7-220ENST00000497957 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
PTK7-220ENST00000497957 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
PTK7-220ENST00000497957 NOS1P29475 1434 aa23.16■■□□□ 1.3
PTK7-220ENST00000497957 FER1L4A9Z1Z3 1794 aa23.15■■□□□ 1.3
PTK7-220ENST00000497957 TONSLQ96HA7 1378 aa23.14■■□□□ 1.3
PTK7-220ENST00000497957 MADDQ8WXG6 1647 aa23.14■■□□□ 1.29
PTK7-220ENST00000497957 ZMYM3Q14202 1370 aa23.14■■□□□ 1.29
PTK7-220ENST00000497957 ERVK-7P63135 1459 aa23.13■■□□□ 1.29
PTK7-220ENST00000497957 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
PTK7-220ENST00000497957 CEBPAP49715 358 aaPredicted RBP23.12■■□□□ 1.29
PTK7-220ENST00000497957 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
PTK7-220ENST00000497957 ADAMTSL3P82987 1691 aa23.11■■□□□ 1.29
PTK7-220ENST00000497957 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
PTK7-220ENST00000497957 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
PTK7-220ENST00000497957 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
PTK7-220ENST00000497957 RIMS1Q86UR5 1692 aaKnown RBP23.09■■□□□ 1.29
PTK7-220ENST00000497957 C3P01024 1663 aa23.08■■□□□ 1.29
PTK7-220ENST00000497957 PIK3C2BO00750 1634 aa23.08■■□□□ 1.28
PTK7-220ENST00000497957 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.28
PTK7-220ENST00000497957 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
PTK7-220ENST00000497957 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
PTK7-220ENST00000497957 PPP1R15AO75807 674 aaPredicted RBP23.06■■□□□ 1.28
PTK7-220ENST00000497957 IDI1Q13907 227 aa23.03■■□□□ 1.28
PTK7-220ENST00000497957 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
PTK7-220ENST00000497957 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
PTK7-220ENST00000497957 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
PTK7-220ENST00000497957 ADGRB3O60242 1522 aa23.01■■□□□ 1.27
PTK7-220ENST00000497957 KIF1BO60333 1816 aa23.01■■□□□ 1.27
PTK7-220ENST00000497957 KDM2AQ9Y2K7 1162 aa23■■□□□ 1.27
PTK7-220ENST00000497957 MYO5BQ9ULV0 1848 aa22.98■■□□□ 1.27
PTK7-220ENST00000497957 DCAF11Q8TEB1 546 aa22.98■■□□□ 1.27
PTK7-220ENST00000497957 TNRQ92752 1358 aa22.98■■□□□ 1.27
PTK7-220ENST00000497957 TMEM131LA2VDJ0 1609 aa22.95■■□□□ 1.26
PTK7-220ENST00000497957 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
PTK7-220ENST00000497957 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
PTK7-220ENST00000497957 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
PTK7-220ENST00000497957 IFT172Q9UG01 1749 aa22.91■■□□□ 1.26
PTK7-220ENST00000497957 NUTM2DQ5VT03 806 aaPredicted RBP22.89■■□□□ 1.25
PTK7-220ENST00000497957 PTPRMP28827 1452 aa22.89■■□□□ 1.25
PTK7-220ENST00000497957 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
PTK7-220ENST00000497957 KDM4FA0A1W2PPD8 638 aa22.88■■□□□ 1.25
PTK7-220ENST00000497957 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
PTK7-220ENST00000497957 PPLO60437 1756 aa22.88■■□□□ 1.25
PTK7-220ENST00000497957 PRAG1Q86YV5 1406 aa22.87■■□□□ 1.25
PTK7-220ENST00000497957 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
PTK7-220ENST00000497957 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
PTK7-220ENST00000497957 MYO3AQ8NEV4 1616 aa22.85■■□□□ 1.25
PTK7-220ENST00000497957 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
PTK7-220ENST00000497957 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
PTK7-220ENST00000497957 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms