RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
USP13-205ENST00000497380 KANK1Q14678 1352 aa15.48■□□□□ 0.07
USP13-205ENST00000497380 AGLP35573 1532 aa15.48■□□□□ 0.07
USP13-205ENST00000497380 PPP6R1Q9UPN7 881 aa15.47■□□□□ 0.07
USP13-205ENST00000497380 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
USP13-205ENST00000497380 NUP155O75694 1391 aa15.45■□□□□ 0.06
USP13-205ENST00000497380 BCORL1Q5H9F3 1711 aa15.45■□□□□ 0.06
USP13-205ENST00000497380 GGT6Q6P531 493 aa15.44■□□□□ 0.06
USP13-205ENST00000497380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.064e-6■■■□□ 15.5
USP13-205ENST00000497380 UNC13BO14795 1591 aa15.41■□□□□ 0.06
USP13-205ENST00000497380 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
USP13-205ENST00000497380 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
USP13-205ENST00000497380 DEPDC5O75140 1603 aa15.4■□□□□ 0.06
USP13-205ENST00000497380 RNF17Q9BXT8 1623 aaKnown RBP15.4■□□□□ 0.06
USP13-205ENST00000497380 WASHC2CQ9Y4E1 1318 aa15.4■□□□□ 0.06
USP13-205ENST00000497380 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
USP13-205ENST00000497380 MPHOSPH9Q99550 1183 aa15.39■□□□□ 0.05
USP13-205ENST00000497380 LMTK3Q96Q04 1460 aa15.39■□□□□ 0.05
USP13-205ENST00000497380 PRDM15P57071 1507 aaPredicted RBP15.38■□□□□ 0.05
USP13-205ENST00000497380 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
USP13-205ENST00000497380 MLECQ14165 292 aa15.37■□□□□ 0.05
USP13-205ENST00000497380 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
USP13-205ENST00000497380 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
USP13-205ENST00000497380 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
USP13-205ENST00000497380 LMTK2Q8IWU2 1503 aa15.34■□□□□ 0.05
USP13-205ENST00000497380 VWDEQ8N2E2 1590 aa15.34■□□□□ 0.05
USP13-205ENST00000497380 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
USP13-205ENST00000497380 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
USP13-205ENST00000497380 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
USP13-205ENST00000497380 PZPP20742 1482 aa15.33■□□□□ 0.05
USP13-205ENST00000497380 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.04
USP13-205ENST00000497380 PKD2Q13563 968 aa15.33■□□□□ 0.04
USP13-205ENST00000497380 SIGLEC1Q9BZZ2 1709 aa15.31■□□□□ 0.04
USP13-205ENST00000497380 ABCC3O15438 1527 aa15.3■□□□□ 0.04
USP13-205ENST00000497380 TET3O43151 1660 aa15.3■□□□□ 0.04
USP13-205ENST00000497380 ARHGAP31Q2M1Z3 1444 aa15.29■□□□□ 0.04
USP13-205ENST00000497380 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
USP13-205ENST00000497380 PTPRMP28827 1452 aa15.27■□□□□ 0.04
USP13-205ENST00000497380 CEP152O94986 1710 aa15.27■□□□□ 0.04
USP13-205ENST00000497380 EFCAB6Q5THR3 1501 aa15.27■□□□□ 0.03
USP13-205ENST00000497380 ZMYM3Q14202 1370 aa15.25■□□□□ 0.03
USP13-205ENST00000497380 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
USP13-205ENST00000497380 CLTCQ00610 1675 aaKnown RBP15.25■□□□□ 0.03
USP13-205ENST00000497380 FOXD1Q16676 465 aa15.24■□□□□ 0.03
USP13-205ENST00000497380 MROH2AA6NES4 1674 aa15.23■□□□□ 0.03
USP13-205ENST00000497380 SOCS7O14512 581 aa15.23■□□□□ 0.03
USP13-205ENST00000497380 NPATQ14207 1427 aa15.23■□□□□ 0.03
USP13-205ENST00000497380 FER1L4A9Z1Z3 1794 aa15.23■□□□□ 0.03
USP13-205ENST00000497380 ANKRD30BQ9BXX2 1392 aa15.23■□□□□ 0.03
USP13-205ENST00000497380 E9PCH4 1651 aa15.22■□□□□ 0.03
USP13-205ENST00000497380 ADAMTSL3P82987 1691 aa15.22■□□□□ 0.03
USP13-205ENST00000497380 PTPRTO14522 1441 aa15.21■□□□□ 0.03
USP13-205ENST00000497380 SLC52A1Q9NWF4 448 aa15.2■□□□□ 0.02
USP13-205ENST00000497380 CCDC144AA2RUR9 1427 aa15.19■□□□□ 0.02
USP13-205ENST00000497380 MADDQ8WXG6 1647 aa15.18■□□□□ 0.02
USP13-205ENST00000497380 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
USP13-205ENST00000497380 NOS1P29475 1434 aa15.17■□□□□ 0.02
USP13-205ENST00000497380 DISP3Q9P2K9 1392 aa15.17■□□□□ 0.02
USP13-205ENST00000497380 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
USP13-205ENST00000497380 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
USP13-205ENST00000497380 SPHKAPQ2M3C7 1700 aa15.17■□□□□ 0.02
USP13-205ENST00000497380 TRPM2O94759 1503 aa15.17■□□□□ 0.02
USP13-205ENST00000497380 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
USP13-205ENST00000497380 ERVK-7P63135 1459 aa15.16■□□□□ 0.02
USP13-205ENST00000497380 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
USP13-205ENST00000497380 PLA2R1Q13018 1463 aa15.15■□□□□ 0.02
USP13-205ENST00000497380 SIN3AQ96ST3 1273 aa15.15■□□□□ 0.02
USP13-205ENST00000497380 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
USP13-205ENST00000497380 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
USP13-205ENST00000497380 CFAP65Q6ZU64 1925 aaKnown RBP15.14■□□□□ 0.01
USP13-205ENST00000497380 CEBPAP49715 358 aaPredicted RBP15.14■□□□□ 0.01
USP13-205ENST00000497380 TNRQ92752 1358 aa15.13■□□□□ 0.01
USP13-205ENST00000497380 C3P01024 1663 aa15.13■□□□□ 0.01
USP13-205ENST00000497380 ILDR2Q71H61 639 aa15.13■□□□□ 0.01
USP13-205ENST00000497380 CERKQ8TCT0 537 aa15.13■□□□□ 0.01
USP13-205ENST00000497380 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
USP13-205ENST00000497380 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
USP13-205ENST00000497380 IDI1Q13907 227 aa15.11■□□□□ 0.01
USP13-205ENST00000497380 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
USP13-205ENST00000497380 NLRP1Q9C000 1473 aa15.1■□□□□ 0.01
USP13-205ENST00000497380 CHGAP10645 457 aaKnown RBP15.09■□□□□ 0.01
USP13-205ENST00000497380 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
USP13-205ENST00000497380 SYNMO15061 1565 aa15.09■□□□□ 0.01
USP13-205ENST00000497380 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
USP13-205ENST00000497380 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
USP13-205ENST00000497380 PIK3C2BO00750 1634 aa15.07■□□□□ 0
USP13-205ENST00000497380 CLTCL1P53675 1640 aa15.07■□□□□ 0
USP13-205ENST00000497380 KIF1BO60333 1816 aa15.07■□□□□ 0
USP13-205ENST00000497380 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
USP13-205ENST00000497380 HDGFP51858 240 aaKnown RBP15.06■□□□□ 0
USP13-205ENST00000497380 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
USP13-205ENST00000497380 HSPA2P54652 639 aa15.05■□□□□ -0
USP13-205ENST00000497380 RGL3Q3MIN7 710 aa15.05■□□□□ -0
USP13-205ENST00000497380 UGGT1Q9NYU2 1555 aa15.04■□□□□ -0
USP13-205ENST00000497380 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
USP13-205ENST00000497380 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
USP13-205ENST00000497380 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
USP13-205ENST00000497380 UHRF1BP1Q6BDS2 1440 aa15.02■□□□□ -0
USP13-205ENST00000497380 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
USP13-205ENST00000497380 KDM5AP29375 1690 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms