RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
SRSF4-205ENST00000497015 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
SRSF4-205ENST00000497015 CASKIN1Q8WXD9 1431 aa16.07■□□□□ 0.16
SRSF4-205ENST00000497015 KIAA1107Q9UPP5 1409 aa16.07■□□□□ 0.16
SRSF4-205ENST00000497015 ZNF644Q9H582 1327 aaPredicted RBP16.06■□□□□ 0.16
SRSF4-205ENST00000497015 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
SRSF4-205ENST00000497015 TNRQ92752 1358 aa16.04■□□□□ 0.16
SRSF4-205ENST00000497015 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
SRSF4-205ENST00000497015 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
SRSF4-205ENST00000497015 POTEAQ6S8J7 498 aa16.03■□□□□ 0.16
SRSF4-205ENST00000497015 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
SRSF4-205ENST00000497015 LRRC7Q96NW7 1537 aa16.02■□□□□ 0.15
SRSF4-205ENST00000497015 MED14O60244 1454 aa16.02■□□□□ 0.15
SRSF4-205ENST00000497015 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.15
SRSF4-205ENST00000497015 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
SRSF4-205ENST00000497015 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
SRSF4-205ENST00000497015 THEMISQ8N1K5 641 aaPredicted RBP16.01■□□□□ 0.15
SRSF4-205ENST00000497015 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
SRSF4-205ENST00000497015 POLR1AO95602 1720 aaPredicted RBP16■□□□□ 0.15
SRSF4-205ENST00000497015 SLC24A1O60721 1099 aa16■□□□□ 0.15
SRSF4-205ENST00000497015 MIA2Q96PC5 1412 aa16■□□□□ 0.15
SRSF4-205ENST00000497015 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
SRSF4-205ENST00000497015 KIF3BO15066 747 aa15.99■□□□□ 0.15
SRSF4-205ENST00000497015 PZPP20742 1482 aa15.97■□□□□ 0.15
SRSF4-205ENST00000497015 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.14
SRSF4-205ENST00000497015 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
SRSF4-205ENST00000497015 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
SRSF4-205ENST00000497015 CCNB3Q8WWL7 1395 aa15.94■□□□□ 0.14
SRSF4-205ENST00000497015 UGGT1Q9NYU2 1555 aa15.94■□□□□ 0.14
SRSF4-205ENST00000497015 ADGBQ8N7X0 1667 aa15.94■□□□□ 0.14
SRSF4-205ENST00000497015 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
SRSF4-205ENST00000497015 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
SRSF4-205ENST00000497015 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
SRSF4-205ENST00000497015 FAM135AQ9P2D6 1515 aa15.9■□□□□ 0.14
SRSF4-205ENST00000497015 LTKP29376 864 aa15.9■□□□□ 0.14
SRSF4-205ENST00000497015 IQGAP1P46940 1657 aa15.89■□□□□ 0.13
SRSF4-205ENST00000497015 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
SRSF4-205ENST00000497015 RNF17Q9BXT8 1623 aaKnown RBP15.87■□□□□ 0.13
SRSF4-205ENST00000497015 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
SRSF4-205ENST00000497015 ZC3H13Q5T200 1668 aaKnown RBP15.85■□□□□ 0.13
SRSF4-205ENST00000497015 XIRP1Q702N8 1843 aaKnown RBP15.84■□□□□ 0.13
SRSF4-205ENST00000497015 TIAM1Q13009 1591 aa15.83■□□□□ 0.13
SRSF4-205ENST00000497015 NCOA2Q15596 1464 aa15.83■□□□□ 0.12
SRSF4-205ENST00000497015 TXNDC2Q86VQ3 553 aa15.82■□□□□ 0.12
SRSF4-205ENST00000497015 RBM33Q96EV2 1170 aaKnown RBP15.82■□□□□ 0.12
SRSF4-205ENST00000497015 MTUS2Q5JR59 1369 aa15.82■□□□□ 0.12
SRSF4-205ENST00000497015 SYNMO15061 1565 aa15.82■□□□□ 0.12
SRSF4-205ENST00000497015 UPF1Q92900 1129 aaKnown RBP eCLIP15.79■□□□□ 0.12
SRSF4-205ENST00000497015 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
SRSF4-205ENST00000497015 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
SRSF4-205ENST00000497015 ARHGAP23Q9P227 1491 aa15.78■□□□□ 0.12
SRSF4-205ENST00000497015 SETD1AO15047 1707 aaKnown RBP15.78■□□□□ 0.12
SRSF4-205ENST00000497015 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
SRSF4-205ENST00000497015 RSPH4AQ5TD94 716 aa15.77■□□□□ 0.12
SRSF4-205ENST00000497015 ABCC3O15438 1527 aa15.77■□□□□ 0.11
SRSF4-205ENST00000497015 TMEM94Q12767 1356 aa15.76■□□□□ 0.11
SRSF4-205ENST00000497015 UBR1Q8IWV7 1749 aa15.75■□□□□ 0.11
SRSF4-205ENST00000497015 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
SRSF4-205ENST00000497015 SLIT1O75093 1534 aa15.74■□□□□ 0.11
SRSF4-205ENST00000497015 CAMSAP2Q08AD1 1489 aa15.72■□□□□ 0.11
SRSF4-205ENST00000497015 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
SRSF4-205ENST00000497015 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
SRSF4-205ENST00000497015 KCNA6P17658 529 aa15.72■□□□□ 0.11
SRSF4-205ENST00000497015 ROBO1Q9Y6N7 1651 aa15.72■□□□□ 0.11
SRSF4-205ENST00000497015 PROSER2Q86WR7 435 aaPredicted RBP15.71■□□□□ 0.11
SRSF4-205ENST00000497015 MAP3K1Q13233 1512 aa15.71■□□□□ 0.11
SRSF4-205ENST00000497015 MROH1Q8NDA8 1641 aa15.71■□□□□ 0.11
SRSF4-205ENST00000497015 SLC26A8Q96RN1 970 aa15.7■□□□□ 0.1
SRSF4-205ENST00000497015 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
SRSF4-205ENST00000497015 NPM3O75607 178 aaKnown RBP15.69■□□□□ 0.1
SRSF4-205ENST00000497015 SLAIN2Q9P270 581 aa15.69■□□□□ 0.1
SRSF4-205ENST00000497015 EID1Q9Y6B2 187 aa15.69■□□□□ 0.1
SRSF4-205ENST00000497015 TMEM2Q9UHN6 1383 aa15.69■□□□□ 0.1
SRSF4-205ENST00000497015 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
SRSF4-205ENST00000497015 TET3O43151 1660 aa15.67■□□□□ 0.1
SRSF4-205ENST00000497015 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
SRSF4-205ENST00000497015 JCADQ9P266 1359 aa15.66■□□□□ 0.1
SRSF4-205ENST00000497015 LRP6O75581 1613 aa15.66■□□□□ 0.1
SRSF4-205ENST00000497015 IDI1Q13907 227 aa15.66■□□□□ 0.1
SRSF4-205ENST00000497015 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
SRSF4-205ENST00000497015 ARHGEF5Q12774 1597 aa15.66■□□□□ 0.1
SRSF4-205ENST00000497015 ARHGAP31Q2M1Z3 1444 aa15.64■□□□□ 0.09
SRSF4-205ENST00000497015 CEP152O94986 1710 aa15.63■□□□□ 0.09
SRSF4-205ENST00000497015 SRCAPQ6ZRS2 3230 aa15.63■□□□□ 0.09
SRSF4-205ENST00000497015 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
SRSF4-205ENST00000497015 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
SRSF4-205ENST00000497015 PHLPP1O60346 1717 aa15.6■□□□□ 0.09
SRSF4-205ENST00000497015 ZNF772Q68DY9 489 aaPredicted RBP15.6■□□□□ 0.09
SRSF4-205ENST00000497015 MAST1Q9Y2H9 1570 aa15.6■□□□□ 0.09
SRSF4-205ENST00000497015 COL16A1Q07092 1604 aaPredicted RBP15.59■□□□□ 0.09
SRSF4-205ENST00000497015 EIF2AK4Q9P2K8 1649 aaKnown RBP15.59■□□□□ 0.09
SRSF4-205ENST00000497015 RXRBP28702 533 aa15.58■□□□□ 0.08
SRSF4-205ENST00000497015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.084e-7■■□□□ 13.1
SRSF4-205ENST00000497015 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.08
SRSF4-205ENST00000497015 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
SRSF4-205ENST00000497015 MSH6P52701 1360 aa15.58■□□□□ 0.08
SRSF4-205ENST00000497015 LRRC9Q6ZRR7 1453 aa15.58■□□□□ 0.08
SRSF4-205ENST00000497015 ZBTB22O15209 634 aa15.57■□□□□ 0.08
SRSF4-205ENST00000497015 NWD1Q149M9 1564 aa15.55■□□□□ 0.08
SRSF4-205ENST00000497015 EFCAB6Q5THR3 1501 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms