RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 DMRTA1Q5VZB9 504 aa14.08□□□□□ -0.16
MDM2-220ENST00000496959 TK2O00142 265 aa14.06□□□□□ -0.16
MDM2-220ENST00000496959 MMRN1Q13201 1228 aa14.04□□□□□ -0.16
MDM2-220ENST00000496959 ADGRD1Q6QNK2 874 aa14.04□□□□□ -0.16
MDM2-220ENST00000496959 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
MDM2-220ENST00000496959 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
MDM2-220ENST00000496959 C6orf132Q5T0Z8 1188 aa14.02□□□□□ -0.17
MDM2-220ENST00000496959 MAP3K7O43318 606 aa14.01□□□□□ -0.17
MDM2-220ENST00000496959 PPP1R3GB7ZBB8 358 aa14□□□□□ -0.17
MDM2-220ENST00000496959 SLC4A5Q9BY07 1137 aa14□□□□□ -0.17
MDM2-220ENST00000496959 ZBED2Q9BTP6 218 aa13.98□□□□□ -0.17
MDM2-220ENST00000496959 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
MDM2-220ENST00000496959 OSBPP22059 807 aa13.97□□□□□ -0.17
MDM2-220ENST00000496959 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
MDM2-220ENST00000496959 VPS9D1Q9Y2B5 631 aa13.97□□□□□ -0.17
MDM2-220ENST00000496959 COL9A1P20849 921 aa13.96□□□□□ -0.17
MDM2-220ENST00000496959 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
MDM2-220ENST00000496959 HRO43593 1189 aa13.94□□□□□ -0.18
MDM2-220ENST00000496959 SEMA3EO15041 775 aa13.93□□□□□ -0.18
MDM2-220ENST00000496959 TSR1Q2NL82 804 aaKnown RBP13.93□□□□□ -0.18
MDM2-220ENST00000496959 RNF166Q96A37 237 aaPredicted RBP13.92□□□□□ -0.18
MDM2-220ENST00000496959 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
MDM2-220ENST00000496959 CERKQ8TCT0 537 aa13.9□□□□□ -0.18
MDM2-220ENST00000496959 PROX2Q3B8N5 592 aa13.89□□□□□ -0.19
MDM2-220ENST00000496959 ONECUT3O60422 494 aaPredicted RBP13.87□□□□□ -0.19
MDM2-220ENST00000496959 SMYD5Q6GMV2 418 aa13.87□□□□□ -0.19
MDM2-220ENST00000496959 NBPF3Q9H094 633 aa13.87□□□□□ -0.19
MDM2-220ENST00000496959 BHMG1C9JSJ3 638 aaPredicted RBP13.86□□□□□ -0.19
MDM2-220ENST00000496959 RABGEF1Q9UJ41 708 aa13.86□□□□□ -0.19
MDM2-220ENST00000496959 TESPA1A2RU30 521 aaPredicted RBP13.85□□□□□ -0.19
MDM2-220ENST00000496959 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
MDM2-220ENST00000496959 MRPL50Q8N5N7 158 aaKnown RBP13.84□□□□□ -0.19
MDM2-220ENST00000496959 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.2
MDM2-220ENST00000496959 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
MDM2-220ENST00000496959 GOLGA8CPA6NN73 597 aa13.81□□□□□ -0.2
MDM2-220ENST00000496959 PRSS12P56730 875 aa13.8□□□□□ -0.2
MDM2-220ENST00000496959 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
MDM2-220ENST00000496959 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
MDM2-220ENST00000496959 NUTM2FA1L443 756 aa13.77□□□□□ -0.21
MDM2-220ENST00000496959 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
MDM2-220ENST00000496959 KCTD12Q96CX2 325 aaKnown RBP13.76□□□□□ -0.21
MDM2-220ENST00000496959 NPDC1Q9NQX5 325 aaPredicted RBP13.76□□□□□ -0.21
MDM2-220ENST00000496959 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
MDM2-220ENST00000496959 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
MDM2-220ENST00000496959 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
MDM2-220ENST00000496959 PTGDRQ13258 359 aa13.71□□□□□ -0.21
MDM2-220ENST00000496959 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.21
MDM2-220ENST00000496959 WNT2BQ93097 391 aa13.71□□□□□ -0.21
MDM2-220ENST00000496959 SEPT9Q9UHD8 586 aaPredicted RBP13.71□□□□□ -0.21
MDM2-220ENST00000496959 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
MDM2-220ENST00000496959 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
MDM2-220ENST00000496959 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
MDM2-220ENST00000496959 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
MDM2-220ENST00000496959 FCHSD2O94868 740 aa13.69□□□□□ -0.22
MDM2-220ENST00000496959 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
MDM2-220ENST00000496959 ANKK1Q8NFD2 765 aa13.68□□□□□ -0.22
MDM2-220ENST00000496959 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
MDM2-220ENST00000496959 TATDN2Q93075 761 aa13.67□□□□□ -0.22
MDM2-220ENST00000496959 ZFRQ96KR1 1074 aaKnown RBP13.67□□□□□ -0.22
MDM2-220ENST00000496959 TTC13Q8NBP0 860 aa13.66□□□□□ -0.22
MDM2-220ENST00000496959 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
MDM2-220ENST00000496959 SMAPO00193 183 aa13.64□□□□□ -0.23
MDM2-220ENST00000496959 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
MDM2-220ENST00000496959 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
MDM2-220ENST00000496959 PTPN5P54829 565 aa13.63□□□□□ -0.23
MDM2-220ENST00000496959 HIC1Q14526 733 aa13.62□□□□□ -0.23
MDM2-220ENST00000496959 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
MDM2-220ENST00000496959 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
MDM2-220ENST00000496959 C3orf80F5H4A9 247 aa13.59□□□□□ -0.23
MDM2-220ENST00000496959 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
MDM2-220ENST00000496959 LRCH3Q96II8 777 aa13.58□□□□□ -0.24
MDM2-220ENST00000496959 BCAMP50895 628 aa13.57□□□□□ -0.24
MDM2-220ENST00000496959 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
MDM2-220ENST00000496959 GNPATO15228 680 aa13.56□□□□□ -0.24
MDM2-220ENST00000496959 RBM46Q8TBY0 533 aaKnown RBP13.55□□□□□ -0.24
MDM2-220ENST00000496959 GPR37O15354 613 aa13.53□□□□□ -0.24
MDM2-220ENST00000496959 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
MDM2-220ENST00000496959 EYA1Q99502 592 aa13.53□□□□□ -0.24
MDM2-220ENST00000496959 ADGRG1Q9Y653 693 aa13.53□□□□□ -0.24
MDM2-220ENST00000496959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
MDM2-220ENST00000496959 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
MDM2-220ENST00000496959 OATP04181 439 aa13.49□□□□□ -0.25
MDM2-220ENST00000496959 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
MDM2-220ENST00000496959 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
MDM2-220ENST00000496959 FECHP22830 423 aa13.48□□□□□ -0.25
MDM2-220ENST00000496959 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
MDM2-220ENST00000496959 DNAJB2P25686 324 aa13.47□□□□□ -0.25
MDM2-220ENST00000496959 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
MDM2-220ENST00000496959 PPP4CP60510 307 aa13.47□□□□□ -0.25
MDM2-220ENST00000496959 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
MDM2-220ENST00000496959 WBP1LQ9NX94 342 aa13.47□□□□□ -0.25
MDM2-220ENST00000496959 SWT1Q5T5J6 900 aaKnown RBP13.46□□□□□ -0.25
MDM2-220ENST00000496959 RNF40O75150 1001 aa13.45□□□□□ -0.26
MDM2-220ENST00000496959 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
MDM2-220ENST00000496959 PXYLP1Q8TE99 480 aa13.44□□□□□ -0.26
MDM2-220ENST00000496959 RCCD1A6NED2 376 aa13.43□□□□□ -0.26
MDM2-220ENST00000496959 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
MDM2-220ENST00000496959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
MDM2-220ENST00000496959 PLA2G2EQ9NZK7 142 aa13.42□□□□□ -0.26
MDM2-220ENST00000496959 METTL3Q86U44 580 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms