RNA–Protein interactions for RNA: ENST00000496746.5

YIF1A-210, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 667 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-210ENST00000496746 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
YIF1A-210ENST00000496746 TNRQ92752 1358 aa23.29■■□□□ 1.32
YIF1A-210ENST00000496746 CPS1P31327 1500 aa23.28■■□□□ 1.32
YIF1A-210ENST00000496746 ALKQ9UM73 1620 aa23.27■■□□□ 1.32
YIF1A-210ENST00000496746 KIF3BO15066 747 aa23.27■■□□□ 1.32
YIF1A-210ENST00000496746 PIP4K2BP78356 416 aa23.27■■□□□ 1.32
YIF1A-210ENST00000496746 PZPP20742 1482 aa23.27■■□□□ 1.32
YIF1A-210ENST00000496746 POLR1AO95602 1720 aaPredicted RBP23.26■■□□□ 1.31
YIF1A-210ENST00000496746 MED1Q15648 1581 aaPredicted RBP23.26■■□□□ 1.31
YIF1A-210ENST00000496746 VWDEQ8N2E2 1590 aa23.26■■□□□ 1.31
YIF1A-210ENST00000496746 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
YIF1A-210ENST00000496746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
YIF1A-210ENST00000496746 EHBP1L1Q8N3D4 1523 aa23.23■■□□□ 1.31
YIF1A-210ENST00000496746 TOM1O60784 492 aa23.23■■□□□ 1.31
YIF1A-210ENST00000496746 MIA2Q96PC5 1412 aa23.23■■□□□ 1.31
YIF1A-210ENST00000496746 KDM5DQ9BY66 1539 aa23.23■■□□□ 1.31
YIF1A-210ENST00000496746 SCAF1Q9H7N4 1312 aaKnown RBP23.22■■□□□ 1.31
YIF1A-210ENST00000496746 ANKLE2Q86XL3 938 aa23.21■■□□□ 1.31
YIF1A-210ENST00000496746 MED14O60244 1454 aa23.21■■□□□ 1.31
YIF1A-210ENST00000496746 FAM135AQ9P2D6 1515 aa23.2■■□□□ 1.3
YIF1A-210ENST00000496746 CCDC141Q6ZP82 1450 aa23.2■■□□□ 1.3
YIF1A-210ENST00000496746 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
YIF1A-210ENST00000496746 THEMISQ8N1K5 641 aaPredicted RBP23.19■■□□□ 1.3
YIF1A-210ENST00000496746 CAMSAP2Q08AD1 1489 aa23.17■■□□□ 1.3
YIF1A-210ENST00000496746 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
YIF1A-210ENST00000496746 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
YIF1A-210ENST00000496746 UGGT1Q9NYU2 1555 aa23.16■■□□□ 1.3
YIF1A-210ENST00000496746 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
YIF1A-210ENST00000496746 NCOA2Q15596 1464 aa23.15■■□□□ 1.3
YIF1A-210ENST00000496746 RSPH4AQ5TD94 716 aa23.14■■□□□ 1.29
YIF1A-210ENST00000496746 STRCP1A6NGW2 1772 aa23.13■■□□□ 1.29
YIF1A-210ENST00000496746 LRRC7Q96NW7 1537 aa23.1■■□□□ 1.29
YIF1A-210ENST00000496746 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
YIF1A-210ENST00000496746 IQGAP1P46940 1657 aa23.07■■□□□ 1.28
YIF1A-210ENST00000496746 ABCC3O15438 1527 aa23.07■■□□□ 1.28
YIF1A-210ENST00000496746 RNF17Q9BXT8 1623 aaKnown RBP23.06■■□□□ 1.28
YIF1A-210ENST00000496746 TSPY4P0CV99 314 aa23.03■■□□□ 1.28
YIF1A-210ENST00000496746 TSPY10P0CW01 314 aa23.03■■□□□ 1.28
YIF1A-210ENST00000496746 MROH1Q8NDA8 1641 aa23.03■■□□□ 1.28
YIF1A-210ENST00000496746 ERVK-7P63135 1459 aa23.03■■□□□ 1.28
YIF1A-210ENST00000496746 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
YIF1A-210ENST00000496746 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
YIF1A-210ENST00000496746 RGS17Q9UGC6 210 aaPredicted RBP23■■□□□ 1.27
YIF1A-210ENST00000496746 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
YIF1A-210ENST00000496746 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
YIF1A-210ENST00000496746 LTKP29376 864 aa22.98■■□□□ 1.27
YIF1A-210ENST00000496746 SYNMO15061 1565 aa22.97■■□□□ 1.27
YIF1A-210ENST00000496746 UBR1Q8IWV7 1749 aa22.97■■□□□ 1.27
YIF1A-210ENST00000496746 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
YIF1A-210ENST00000496746 EIF2AK4Q9P2K8 1649 aaKnown RBP22.95■■□□□ 1.26
YIF1A-210ENST00000496746 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
YIF1A-210ENST00000496746 SCAF11Q99590 1463 aaKnown RBP22.93■■□□□ 1.26
YIF1A-210ENST00000496746 SLIT1O75093 1534 aa22.92■■□□□ 1.26
YIF1A-210ENST00000496746 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
YIF1A-210ENST00000496746 CEP152O94986 1710 aa22.91■■□□□ 1.26
YIF1A-210ENST00000496746 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
YIF1A-210ENST00000496746 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
YIF1A-210ENST00000496746 ARHGAP31Q2M1Z3 1444 aa22.89■■□□□ 1.25
YIF1A-210ENST00000496746 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
YIF1A-210ENST00000496746 DUOX2Q9NRD8 1548 aa22.86■■□□□ 1.25
YIF1A-210ENST00000496746 FAM135BQ49AJ0 1406 aa22.83■■□□□ 1.25
YIF1A-210ENST00000496746 MYOM3Q5VTT5 1437 aa22.83■■□□□ 1.25
YIF1A-210ENST00000496746 PRDM15P57071 1507 aaPredicted RBP22.83■■□□□ 1.25
YIF1A-210ENST00000496746 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
YIF1A-210ENST00000496746 TMEM2Q9UHN6 1383 aa22.81■■□□□ 1.24
YIF1A-210ENST00000496746 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
YIF1A-210ENST00000496746 POTEAQ6S8J7 498 aa22.8■■□□□ 1.24
YIF1A-210ENST00000496746 ABCC5O15440 1437 aa22.79■■□□□ 1.24
YIF1A-210ENST00000496746 TMEM94Q12767 1356 aa22.78■■□□□ 1.24
YIF1A-210ENST00000496746 KIF15Q9NS87 1388 aa22.78■■□□□ 1.24
YIF1A-210ENST00000496746 MAP3K1Q13233 1512 aa22.78■■□□□ 1.24
YIF1A-210ENST00000496746 EID1Q9Y6B2 187 aa22.78■■□□□ 1.24
YIF1A-210ENST00000496746 TET3O43151 1660 aa22.77■■□□□ 1.24
YIF1A-210ENST00000496746 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
YIF1A-210ENST00000496746 ERBINQ96RT1 1412 aa22.76■■□□□ 1.23
YIF1A-210ENST00000496746 IDI1Q13907 227 aa22.76■■□□□ 1.23
YIF1A-210ENST00000496746 KCNA6P17658 529 aa22.75■■□□□ 1.23
YIF1A-210ENST00000496746 RBM33Q96EV2 1170 aaKnown RBP22.74■■□□□ 1.23
YIF1A-210ENST00000496746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.23
YIF1A-210ENST00000496746 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
YIF1A-210ENST00000496746 SLC26A8Q96RN1 970 aa22.72■■□□□ 1.23
YIF1A-210ENST00000496746 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
YIF1A-210ENST00000496746 LMTK2Q8IWU2 1503 aa22.71■■□□□ 1.23
YIF1A-210ENST00000496746 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
YIF1A-210ENST00000496746 KDM5AP29375 1690 aaKnown RBP22.71■■□□□ 1.23
YIF1A-210ENST00000496746 ROBO1Q9Y6N7 1651 aa22.7■■□□□ 1.22
YIF1A-210ENST00000496746 PROSER2Q86WR7 435 aaPredicted RBP22.69■■□□□ 1.22
YIF1A-210ENST00000496746 NOS1P29475 1434 aa22.68■■□□□ 1.22
YIF1A-210ENST00000496746 DAPK1P53355 1430 aa22.67■■□□□ 1.22
YIF1A-210ENST00000496746 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
YIF1A-210ENST00000496746 PTPN23Q9H3S7 1636 aa22.65■■□□□ 1.22
YIF1A-210ENST00000496746 NWD1Q149M9 1564 aa22.65■■□□□ 1.22
YIF1A-210ENST00000496746 KANK1Q14678 1352 aa22.63■■□□□ 1.21
YIF1A-210ENST00000496746 NKTRP30414 1462 aaKnown RBP22.62■■□□□ 1.21
YIF1A-210ENST00000496746 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
YIF1A-210ENST00000496746 CHIC2Q9UKJ5 165 aa22.61■■□□□ 1.21
YIF1A-210ENST00000496746 ADGRB3O60242 1522 aa22.61■■□□□ 1.21
YIF1A-210ENST00000496746 ZFYVE9O95405 1425 aa22.58■■□□□ 1.21
YIF1A-210ENST00000496746 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
YIF1A-210ENST00000496746 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms