RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
COMMD3-214ENST00000496071 EIF2AK4Q9P2K8 1649 aaKnown RBP26.35■■□□□ 1.81
COMMD3-214ENST00000496071 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
COMMD3-214ENST00000496071 KDM5DQ9BY66 1539 aa26.32■■□□□ 1.8
COMMD3-214ENST00000496071 WASHC2CQ9Y4E1 1318 aa26.32■■□□□ 1.8
COMMD3-214ENST00000496071 RNF17Q9BXT8 1623 aaKnown RBP26.3■■□□□ 1.8
COMMD3-214ENST00000496071 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
COMMD3-214ENST00000496071 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
COMMD3-214ENST00000496071 PTPRKQ15262 1439 aa26.3■■□□□ 1.8
COMMD3-214ENST00000496071 RRP7BPQ9NSQ0 103 aa26.28■■□□□ 1.8
COMMD3-214ENST00000496071 ANKRD30AQ9BXX3 1397 aa26.28■■□□□ 1.8
COMMD3-214ENST00000496071 ERBINQ96RT1 1412 aa26.26■■□□□ 1.79
COMMD3-214ENST00000496071 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
COMMD3-214ENST00000496071 ZC3H13Q5T200 1668 aaKnown RBP26.23■■□□□ 1.79
COMMD3-214ENST00000496071 PZPP20742 1482 aa26.22■■□□□ 1.79
COMMD3-214ENST00000496071 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
COMMD3-214ENST00000496071 DMRT2Q9Y5R5 561 aa26.21■■□□□ 1.79
COMMD3-214ENST00000496071 ADGRL2O95490 1459 aa26.2■■□□□ 1.78
COMMD3-214ENST00000496071 MYO3AQ8NEV4 1616 aa26.2■■□□□ 1.78
COMMD3-214ENST00000496071 MROH1Q8NDA8 1641 aa26.19■■□□□ 1.78
COMMD3-214ENST00000496071 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
COMMD3-214ENST00000496071 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
COMMD3-214ENST00000496071 ZNF142P52746 1687 aaPredicted RBP26.18■■□□□ 1.78
COMMD3-214ENST00000496071 ABCC3O15438 1527 aa26.18■■□□□ 1.78
COMMD3-214ENST00000496071 FBXO31Q5XUX0 539 aaPredicted RBP26.16■■□□□ 1.78
COMMD3-214ENST00000496071 CEP170BQ9Y4F5 1589 aaPredicted RBP26.16■■□□□ 1.78
COMMD3-214ENST00000496071 TNRQ92752 1358 aa26.15■■□□□ 1.78
COMMD3-214ENST00000496071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.78
COMMD3-214ENST00000496071 PRDM15P57071 1507 aaPredicted RBP26.14■■□□□ 1.77
COMMD3-214ENST00000496071 CEP152O94986 1710 aa26.13■■□□□ 1.77
COMMD3-214ENST00000496071 DEPDC5O75140 1603 aa26.13■■□□□ 1.77
COMMD3-214ENST00000496071 KANK1Q14678 1352 aa26.12■■□□□ 1.77
COMMD3-214ENST00000496071 CAMSAP1Q5T5Y3 1602 aa26.12■■□□□ 1.77
COMMD3-214ENST00000496071 A2ML1A8K2U0 1454 aa26.11■■□□□ 1.77
COMMD3-214ENST00000496071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.77
COMMD3-214ENST00000496071 PTPRTO14522 1441 aa26.09■■□□□ 1.77
COMMD3-214ENST00000496071 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
COMMD3-214ENST00000496071 ANKRD50Q9ULJ7 1429 aa26.06■■□□□ 1.76
COMMD3-214ENST00000496071 NLRP1Q9C000 1473 aa26.06■■□□□ 1.76
COMMD3-214ENST00000496071 SPATA31D1Q6ZQQ2 1576 aa26.06■■□□□ 1.76
COMMD3-214ENST00000496071 ROCK1Q13464 1354 aa26.06■■□□□ 1.76
COMMD3-214ENST00000496071 ARHGAP31Q2M1Z3 1444 aa26.05■■□□□ 1.76
COMMD3-214ENST00000496071 PKD2Q13563 968 aa26.04■■□□□ 1.76
COMMD3-214ENST00000496071 ERVK-7P63135 1459 aa26.04■■□□□ 1.76
COMMD3-214ENST00000496071 CFAP65Q6ZU64 1925 aaKnown RBP26.02■■□□□ 1.76
COMMD3-214ENST00000496071 VWDEQ8N2E2 1590 aa26.02■■□□□ 1.76
COMMD3-214ENST00000496071 LMTK2Q8IWU2 1503 aa26.01■■□□□ 1.75
COMMD3-214ENST00000496071 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
COMMD3-214ENST00000496071 NCKAP5LQ9HCH0 1330 aa26■■□□□ 1.75
COMMD3-214ENST00000496071 ITGAEP38570 1179 aa26■■□□□ 1.75
COMMD3-214ENST00000496071 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
COMMD3-214ENST00000496071 THEMISQ8N1K5 641 aaPredicted RBP26■■□□□ 1.75
COMMD3-214ENST00000496071 UGGT1Q9NYU2 1555 aa25.99■■□□□ 1.75
COMMD3-214ENST00000496071 CERKQ8TCT0 537 aa25.94■■□□□ 1.74
COMMD3-214ENST00000496071 FBXO41Q8TF61 875 aa25.94■■□□□ 1.74
COMMD3-214ENST00000496071 ANKLE2Q86XL3 938 aa25.92■■□□□ 1.74
COMMD3-214ENST00000496071 POLR1AO95602 1720 aaPredicted RBP25.91■■□□□ 1.74
COMMD3-214ENST00000496071 UNC13BO14795 1591 aa25.91■■□□□ 1.74
COMMD3-214ENST00000496071 EFCAB6Q5THR3 1501 aa25.91■■□□□ 1.74
COMMD3-214ENST00000496071 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
COMMD3-214ENST00000496071 TET3O43151 1660 aa25.87■■□□□ 1.73
COMMD3-214ENST00000496071 UBR1Q8IWV7 1749 aa25.86■■□□□ 1.73
COMMD3-214ENST00000496071 GCC2Q8IWJ2 1684 aa25.84■■□□□ 1.73
COMMD3-214ENST00000496071 NOS1P29475 1434 aa25.84■■□□□ 1.73
COMMD3-214ENST00000496071 NEURL4Q96JN8 1562 aa25.83■■□□□ 1.73
COMMD3-214ENST00000496071 LTBP4Q8N2S1 1624 aa25.82■■□□□ 1.72
COMMD3-214ENST00000496071 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
COMMD3-214ENST00000496071 MED14O60244 1454 aa25.81■■□□□ 1.72
COMMD3-214ENST00000496071 PIK3C2BO00750 1634 aa25.81■■□□□ 1.72
COMMD3-214ENST00000496071 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
COMMD3-214ENST00000496071 IDI1Q13907 227 aa25.8■■□□□ 1.72
COMMD3-214ENST00000496071 SLC52A1Q9NWF4 448 aa25.8■■□□□ 1.72
COMMD3-214ENST00000496071 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
COMMD3-214ENST00000496071 SYNMO15061 1565 aa25.8■■□□□ 1.72
COMMD3-214ENST00000496071 NUP155O75694 1391 aa25.8■■□□□ 1.72
COMMD3-214ENST00000496071 NPHP4O75161 1426 aaPredicted RBP25.78■■□□□ 1.72
COMMD3-214ENST00000496071 ZNF335Q9H4Z2 1342 aaPredicted RBP25.77■■□□□ 1.72
COMMD3-214ENST00000496071 SLIT1O75093 1534 aa25.77■■□□□ 1.72
COMMD3-214ENST00000496071 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
COMMD3-214ENST00000496071 NAIPQ13075 1403 aa25.75■■□□□ 1.71
COMMD3-214ENST00000496071 E9PCH4 1651 aa25.74■■□□□ 1.71
COMMD3-214ENST00000496071 IQGAP1P46940 1657 aa25.74■■□□□ 1.71
COMMD3-214ENST00000496071 IQSEC2Q5JU85 1478 aa25.74■■□□□ 1.71
COMMD3-214ENST00000496071 EID1Q9Y6B2 187 aa25.74■■□□□ 1.71
COMMD3-214ENST00000496071 TXNDC2Q86VQ3 553 aa25.73■■□□□ 1.71
COMMD3-214ENST00000496071 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
COMMD3-214ENST00000496071 TMEM2Q9UHN6 1383 aa25.71■■□□□ 1.71
COMMD3-214ENST00000496071 HFM1A2PYH4 1435 aa25.71■■□□□ 1.71
COMMD3-214ENST00000496071 ADGRB3O60242 1522 aa25.69■■□□□ 1.7
COMMD3-214ENST00000496071 LTKP29376 864 aa25.69■■□□□ 1.7
COMMD3-214ENST00000496071 CPS1P31327 1500 aa25.65■■□□□ 1.7
COMMD3-214ENST00000496071 HDGFP51858 240 aaKnown RBP25.62■■□□□ 1.69
COMMD3-214ENST00000496071 TMEM131LA2VDJ0 1609 aa25.61■■□□□ 1.69
COMMD3-214ENST00000496071 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
COMMD3-214ENST00000496071 MYO5BQ9ULV0 1848 aa25.6■■□□□ 1.69
COMMD3-214ENST00000496071 SPHKAPQ2M3C7 1700 aa25.58■■□□□ 1.69
COMMD3-214ENST00000496071 CHGAP10645 457 aaKnown RBP25.58■■□□□ 1.69
COMMD3-214ENST00000496071 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
COMMD3-214ENST00000496071 ZFYVE9O95405 1425 aa25.54■■□□□ 1.68
COMMD3-214ENST00000496071 RIMS2Q9UQ26 1411 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms