RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 PRIM1P49642 420 aaKnown RBP10.36□□□□□ -0.75
RBM39-240ENST00000495293 PTPN5P54829 565 aa10.36□□□□□ -0.75
RBM39-240ENST00000495293 PDIA6Q15084 440 aa10.36□□□□□ -0.75
RBM39-240ENST00000495293 THSD4Q6ZMP0 1018 aa10.36□□□□□ -0.75
RBM39-240ENST00000495293 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
RBM39-240ENST00000495293 C6orf132Q5T0Z8 1188 aa10.35□□□□□ -0.75
RBM39-240ENST00000495293 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
RBM39-240ENST00000495293 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
RBM39-240ENST00000495293 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
RBM39-240ENST00000495293 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
RBM39-240ENST00000495293 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
RBM39-240ENST00000495293 WNT2BQ93097 391 aa10.32□□□□□ -0.76
RBM39-240ENST00000495293 EPAS1Q99814 870 aa10.32□□□□□ -0.76
RBM39-240ENST00000495293 RABGEF1Q9UJ41 708 aa10.32□□□□□ -0.76
RBM39-240ENST00000495293 E2F4Q16254 413 aa10.3□□□□□ -0.76
RBM39-240ENST00000495293 NBR1Q14596 966 aa10.29□□□□□ -0.76
RBM39-240ENST00000495293 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
RBM39-240ENST00000495293 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
RBM39-240ENST00000495293 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
RBM39-240ENST00000495293 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
RBM39-240ENST00000495293 BCAMP50895 628 aa10.26□□□□□ -0.77
RBM39-240ENST00000495293 ARIH1Q9Y4X5 557 aaPredicted RBP10.26□□□□□ -0.77
RBM39-240ENST00000495293 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
RBM39-240ENST00000495293 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
RBM39-240ENST00000495293 TSKSQ9UJT2 592 aa10.25□□□□□ -0.77
RBM39-240ENST00000495293 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
RBM39-240ENST00000495293 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
RBM39-240ENST00000495293 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
RBM39-240ENST00000495293 MAP3K7O43318 606 aa10.23□□□□□ -0.77
RBM39-240ENST00000495293 ZFRQ96KR1 1074 aaKnown RBP10.23□□□□□ -0.77
RBM39-240ENST00000495293 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
RBM39-240ENST00000495293 RGS20O76081 388 aa10.22□□□□□ -0.77
RBM39-240ENST00000495293 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
RBM39-240ENST00000495293 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
RBM39-240ENST00000495293 ONECUT3O60422 494 aaPredicted RBP10.21□□□□□ -0.77
RBM39-240ENST00000495293 OSBPP22059 807 aa10.2□□□□□ -0.78
RBM39-240ENST00000495293 LAPTM4BQ86VI4 370 aa10.2□□□□□ -0.78
RBM39-240ENST00000495293 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
RBM39-240ENST00000495293 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
RBM39-240ENST00000495293 IRX2Q9BZI1 471 aaPredicted RBP10.19□□□□□ -0.78
RBM39-240ENST00000495293 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
RBM39-240ENST00000495293 IFFO2Q5TF58 517 aa10.18□□□□□ -0.78
RBM39-240ENST00000495293 SMAPO00193 183 aa10.17□□□□□ -0.78
RBM39-240ENST00000495293 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
RBM39-240ENST00000495293 FAM98CQ17RN3 349 aaKnown RBP10.16□□□□□ -0.78
RBM39-240ENST00000495293 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
RBM39-240ENST00000495293 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
RBM39-240ENST00000495293 PRSS12P56730 875 aa10.13□□□□□ -0.79
RBM39-240ENST00000495293 MLLT3P42568 568 aaPredicted RBP10.12□□□□□ -0.79
RBM39-240ENST00000495293 NPDC1Q9NQX5 325 aaPredicted RBP10.12□□□□□ -0.79
RBM39-240ENST00000495293 A0A0G2JS52 829 aa10.11□□□□□ -0.79
RBM39-240ENST00000495293 ITGBL1O95965 494 aaPredicted RBP10.11□□□□□ -0.79
RBM39-240ENST00000495293 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
RBM39-240ENST00000495293 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
RBM39-240ENST00000495293 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.09□□□□□ -0.79
RBM39-240ENST00000495293 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
RBM39-240ENST00000495293 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
RBM39-240ENST00000495293 TATDN2Q93075 761 aa10.07□□□□□ -0.8
RBM39-240ENST00000495293 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
RBM39-240ENST00000495293 TSR3Q9UJK0 312 aaKnown RBP10.06□□□□□ -0.8
RBM39-240ENST00000495293 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
RBM39-240ENST00000495293 CERKQ8TCT0 537 aa10.05□□□□□ -0.8
RBM39-240ENST00000495293 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
RBM39-240ENST00000495293 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
RBM39-240ENST00000495293 ARHGEF1Q92888 912 aaKnown RBP10.04□□□□□ -0.8
RBM39-240ENST00000495293 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
RBM39-240ENST00000495293 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
RBM39-240ENST00000495293 NBPF26B4DH59 902 aa10.01□□□□□ -0.81
RBM39-240ENST00000495293 PPP4CP60510 307 aa9.97□□□□□ -0.81
RBM39-240ENST00000495293 KCNC4Q03721 635 aa9.97□□□□□ -0.81
RBM39-240ENST00000495293 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
RBM39-240ENST00000495293 SEMA3EO15041 775 aa9.96□□□□□ -0.82
RBM39-240ENST00000495293 PTGDRQ13258 359 aa9.96□□□□□ -0.82
RBM39-240ENST00000495293 EYA1Q99502 592 aa9.96□□□□□ -0.82
RBM39-240ENST00000495293 APLP1P51693 650 aa9.95□□□□□ -0.82
RBM39-240ENST00000495293 SWT1Q5T5J6 900 aaKnown RBP9.95□□□□□ -0.82
RBM39-240ENST00000495293 Q6ZNB5 142 aa9.94□□□□□ -0.82
RBM39-240ENST00000495293 RNF40O75150 1001 aa9.93□□□□□ -0.82
RBM39-240ENST00000495293 MTRQ99707 1265 aa9.93□□□□□ -0.82
RBM39-240ENST00000495293 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
RBM39-240ENST00000495293 FAM161AQ3B820 660 aa9.92□□□□□ -0.82
RBM39-240ENST00000495293 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
RBM39-240ENST00000495293 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
RBM39-240ENST00000495293 NKX2-3Q8TAU0 364 aa9.87□□□□□ -0.83
RBM39-240ENST00000495293 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
RBM39-240ENST00000495293 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
RBM39-240ENST00000495293 IL21Q9HBE4 155 aa9.85□□□□□ -0.83
RBM39-240ENST00000495293 RBM26Q5T8P6 1007 aaKnown RBP9.84□□□□□ -0.83
RBM39-240ENST00000495293 TESPA1A2RU30 521 aaPredicted RBP9.83□□□□□ -0.84
RBM39-240ENST00000495293 LCE2BO14633 110 aa9.83□□□□□ -0.84
RBM39-240ENST00000495293 COPS2P61201 443 aa9.83□□□□□ -0.84
RBM39-240ENST00000495293 PPP1R18Q6NYC8 613 aa9.83□□□□□ -0.84
RBM39-240ENST00000495293 GPR37O15354 613 aa9.82□□□□□ -0.84
RBM39-240ENST00000495293 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
RBM39-240ENST00000495293 TMEM134Q9H6X4 195 aa9.82□□□□□ -0.84
RBM39-240ENST00000495293 RCCD1A6NED2 376 aa9.81□□□□□ -0.84
RBM39-240ENST00000495293 FECHP22830 423 aa9.81□□□□□ -0.84
RBM39-240ENST00000495293 HDGFP51858 240 aaKnown RBP9.81□□□□□ -0.84
RBM39-240ENST00000495293 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
RBM39-240ENST00000495293 DNAJB2P25686 324 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms