RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
GARNL3-219ENST00000495172 PREX2Q70Z35 1606 aa15.33■□□□□ 0.04
GARNL3-219ENST00000495172 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
GARNL3-219ENST00000495172 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
GARNL3-219ENST00000495172 ZC3H13Q5T200 1668 aaKnown RBP15.31■□□□□ 0.04
GARNL3-219ENST00000495172 LRRIQ1Q96JM4 1722 aa15.31■□□□□ 0.04
GARNL3-219ENST00000495172 SPAG9O60271 1321 aaKnown RBP15.3■□□□□ 0.04
GARNL3-219ENST00000495172 A2MP01023 1474 aa15.3■□□□□ 0.04
GARNL3-219ENST00000495172 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
GARNL3-219ENST00000495172 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
GARNL3-219ENST00000495172 SYCP2Q9BX26 1530 aa15.29■□□□□ 0.04
GARNL3-219ENST00000495172 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
GARNL3-219ENST00000495172 ATP7AQ04656 1500 aa15.28■□□□□ 0.04
GARNL3-219ENST00000495172 THEMISQ8N1K5 641 aaPredicted RBP15.28■□□□□ 0.04
GARNL3-219ENST00000495172 MEX3CQ5U5Q3 659 aaKnown RBP15.27■□□□□ 0.04
GARNL3-219ENST00000495172 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
GARNL3-219ENST00000495172 RXRBP28702 533 aa15.26■□□□□ 0.03
GARNL3-219ENST00000495172 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
GARNL3-219ENST00000495172 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-219ENST00000495172 JCADQ9P266 1359 aa15.24■□□□□ 0.03
GARNL3-219ENST00000495172 ZNF772Q68DY9 489 aaPredicted RBP15.23■□□□□ 0.03
GARNL3-219ENST00000495172 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
GARNL3-219ENST00000495172 RGS12O14924 1447 aa15.22■□□□□ 0.03
GARNL3-219ENST00000495172 CLIP1P30622 1438 aa15.22■□□□□ 0.03
GARNL3-219ENST00000495172 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
GARNL3-219ENST00000495172 PZPP20742 1482 aa15.21■□□□□ 0.03
GARNL3-219ENST00000495172 MIA2Q96PC5 1412 aa15.21■□□□□ 0.03
GARNL3-219ENST00000495172 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
GARNL3-219ENST00000495172 COL16A1Q07092 1604 aaPredicted RBP15.2■□□□□ 0.02
GARNL3-219ENST00000495172 EP400Q96L91 3159 aa15.2■□□□□ 0.02
GARNL3-219ENST00000495172 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
GARNL3-219ENST00000495172 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-219ENST00000495172 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-219ENST00000495172 ADRA2BP18089 450 aa15.19■□□□□ 0.02
GARNL3-219ENST00000495172 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-219ENST00000495172 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-219ENST00000495172 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
GARNL3-219ENST00000495172 LTKP29376 864 aa15.18■□□□□ 0.02
GARNL3-219ENST00000495172 NLRP1Q9C000 1473 aa15.18■□□□□ 0.02
GARNL3-219ENST00000495172 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
GARNL3-219ENST00000495172 CDK12Q9NYV4 1490 aaPredicted RBP15.15■□□□□ 0.02
GARNL3-219ENST00000495172 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
GARNL3-219ENST00000495172 KDM5DQ9BY66 1539 aa15.13■□□□□ 0.01
GARNL3-219ENST00000495172 KIF3BO15066 747 aa15.13■□□□□ 0.01
GARNL3-219ENST00000495172 SCAF11Q99590 1463 aaKnown RBP15.13■□□□□ 0.01
GARNL3-219ENST00000495172 AFF2P51816 1311 aa15.13■□□□□ 0.01
GARNL3-219ENST00000495172 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
GARNL3-219ENST00000495172 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-219ENST00000495172 SLAIN2Q9P270 581 aa15.11■□□□□ 0.01
GARNL3-219ENST00000495172 UBR1Q8IWV7 1749 aa15.11■□□□□ 0.01
GARNL3-219ENST00000495172 WASHC2CQ9Y4E1 1318 aa15.11■□□□□ 0.01
GARNL3-219ENST00000495172 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
GARNL3-219ENST00000495172 SPATA31A6Q5VVP1 1343 aa15.1■□□□□ 0.01
GARNL3-219ENST00000495172 NCOA2Q15596 1464 aa15.08■□□□□ 0.01
GARNL3-219ENST00000495172 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0.01
GARNL3-219ENST00000495172 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
GARNL3-219ENST00000495172 FMN1Q68DA7 1419 aa15.08■□□□□ 0
GARNL3-219ENST00000495172 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
GARNL3-219ENST00000495172 SHPRHQ149N8 1683 aa15.07■□□□□ 0
GARNL3-219ENST00000495172 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
GARNL3-219ENST00000495172 QTRT2Q9H974 415 aaKnown RBP15.06■□□□□ 0
GARNL3-219ENST00000495172 SLC26A8Q96RN1 970 aa15.05■□□□□ -0
GARNL3-219ENST00000495172 TIAM1Q13009 1591 aa15.05■□□□□ -0
GARNL3-219ENST00000495172 DHX29Q7Z478 1369 aaKnown RBP15.04■□□□□ -0
GARNL3-219ENST00000495172 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
GARNL3-219ENST00000495172 ARHGAP23Q9P227 1491 aa15.02■□□□□ -0
GARNL3-219ENST00000495172 FGD6Q6ZV73 1430 aa15.02■□□□□ -0
GARNL3-219ENST00000495172 MSH6P52701 1360 aa15.02■□□□□ -0
GARNL3-219ENST00000495172 ATAD2Q6PL18 1390 aa15.02■□□□□ -0
GARNL3-219ENST00000495172 KCNA6P17658 529 aa15.02■□□□□ -0
GARNL3-219ENST00000495172 C8orf37Q96NL8 207 aa15.02■□□□□ -0
GARNL3-219ENST00000495172 PRDM15P57071 1507 aaPredicted RBP15.02□□□□□ -0.01
GARNL3-219ENST00000495172 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
GARNL3-219ENST00000495172 KIAA1107Q9UPP5 1409 aa15.01□□□□□ -0.01
GARNL3-219ENST00000495172 DIP2AQ14689 1571 aa15□□□□□ -0.01
GARNL3-219ENST00000495172 IFFO2Q5TF58 517 aa15□□□□□ -0.01
GARNL3-219ENST00000495172 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
GARNL3-219ENST00000495172 SLIT1O75093 1534 aa15□□□□□ -0.01
GARNL3-219ENST00000495172 KDM5AP29375 1690 aaKnown RBP14.98□□□□□ -0.01
GARNL3-219ENST00000495172 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
GARNL3-219ENST00000495172 LRP5O75197 1615 aa14.98□□□□□ -0.01
GARNL3-219ENST00000495172 AHDC1Q5TGY3 1603 aaPredicted RBP14.96□□□□□ -0.01
GARNL3-219ENST00000495172 ABCC3O15438 1527 aa14.96□□□□□ -0.02
GARNL3-219ENST00000495172 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
GARNL3-219ENST00000495172 MAST1Q9Y2H9 1570 aa14.95□□□□□ -0.02
GARNL3-219ENST00000495172 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
GARNL3-219ENST00000495172 PSDA5PKW4 1024 aaPredicted RBP14.94□□□□□ -0.02
GARNL3-219ENST00000495172 DEFB132Q7Z7B7 95 aa14.94□□□□□ -0.02
GARNL3-219ENST00000495172 EID1Q9Y6B2 187 aa14.94□□□□□ -0.02
GARNL3-219ENST00000495172 CEP152O94986 1710 aa14.94□□□□□ -0.02
GARNL3-219ENST00000495172 NWD1Q149M9 1564 aa14.94□□□□□ -0.02
GARNL3-219ENST00000495172 TET3O43151 1660 aa14.93□□□□□ -0.02
GARNL3-219ENST00000495172 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
GARNL3-219ENST00000495172 YY1P25490 414 aa14.92□□□□□ -0.02
GARNL3-219ENST00000495172 NKTRP30414 1462 aaKnown RBP14.92□□□□□ -0.02
GARNL3-219ENST00000495172 TMEM2Q9UHN6 1383 aa14.91□□□□□ -0.02
GARNL3-219ENST00000495172 ADAMTS2O95450 1211 aa14.91□□□□□ -0.02
GARNL3-219ENST00000495172 CCDC18Q5T9S5 1454 aa14.9□□□□□ -0.02
GARNL3-219ENST00000495172 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
GARNL3-219ENST00000495172 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms