RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 ITGAEP38570 1179 aa24.76■■□□□ 1.55
YIF1A-209ENST00000494836 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
YIF1A-209ENST00000494836 PPP6R1Q9UPN7 881 aa24.76■■□□□ 1.55
YIF1A-209ENST00000494836 CLTCQ00610 1675 aaKnown RBP24.75■■□□□ 1.55
YIF1A-209ENST00000494836 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
YIF1A-209ENST00000494836 FAM135AQ9P2D6 1515 aa24.74■■□□□ 1.55
YIF1A-209ENST00000494836 C3P01024 1663 aa24.73■■□□□ 1.55
YIF1A-209ENST00000494836 ROCK1Q13464 1354 aa24.73■■□□□ 1.55
YIF1A-209ENST00000494836 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
YIF1A-209ENST00000494836 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
YIF1A-209ENST00000494836 MROH1Q8NDA8 1641 aa24.69■■□□□ 1.54
YIF1A-209ENST00000494836 ANKRD50Q9ULJ7 1429 aa24.68■■□□□ 1.54
YIF1A-209ENST00000494836 ZMYM3Q14202 1370 aa24.67■■□□□ 1.54
YIF1A-209ENST00000494836 WASHC2CQ9Y4E1 1318 aa24.67■■□□□ 1.54
YIF1A-209ENST00000494836 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
YIF1A-209ENST00000494836 ZC3H13Q5T200 1668 aaKnown RBP24.66■■□□□ 1.54
YIF1A-209ENST00000494836 DEPDC5O75140 1603 aa24.66■■□□□ 1.54
YIF1A-209ENST00000494836 ABCC3O15438 1527 aa24.64■■□□□ 1.53
YIF1A-209ENST00000494836 PREX1Q8TCU6 1659 aa24.6■■□□□ 1.53
YIF1A-209ENST00000494836 CEP152O94986 1710 aa24.6■■□□□ 1.53
YIF1A-209ENST00000494836 NPATQ14207 1427 aa24.6■■□□□ 1.53
YIF1A-209ENST00000494836 KANK1Q14678 1352 aa24.59■■□□□ 1.53
YIF1A-209ENST00000494836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
YIF1A-209ENST00000494836 LMTK3Q96Q04 1460 aa24.58■■□□□ 1.53
YIF1A-209ENST00000494836 PZPP20742 1482 aa24.57■■□□□ 1.52
YIF1A-209ENST00000494836 SETD1BQ9UPS6 1966 aaKnown RBP24.56■■□□□ 1.52
YIF1A-209ENST00000494836 CAMSAP1Q5T5Y3 1602 aa24.56■■□□□ 1.52
YIF1A-209ENST00000494836 UNC13BO14795 1591 aa24.54■■□□□ 1.52
YIF1A-209ENST00000494836 VWDEQ8N2E2 1590 aa24.54■■□□□ 1.52
YIF1A-209ENST00000494836 UHRF1BP1Q6BDS2 1440 aa24.54■■□□□ 1.52
YIF1A-209ENST00000494836 GCC2Q8IWJ2 1684 aa24.54■■□□□ 1.52
YIF1A-209ENST00000494836 NAIPQ13075 1403 aa24.52■■□□□ 1.52
YIF1A-209ENST00000494836 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
YIF1A-209ENST00000494836 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
YIF1A-209ENST00000494836 MYO3AQ8NEV4 1616 aa24.49■■□□□ 1.51
YIF1A-209ENST00000494836 ARHGAP31Q2M1Z3 1444 aa24.48■■□□□ 1.51
YIF1A-209ENST00000494836 FBXO31Q5XUX0 539 aaPredicted RBP24.48■■□□□ 1.51
YIF1A-209ENST00000494836 EFCAB6Q5THR3 1501 aa24.46■■□□□ 1.51
YIF1A-209ENST00000494836 TNRQ92752 1358 aa24.46■■□□□ 1.51
YIF1A-209ENST00000494836 SPATA31D1Q6ZQQ2 1576 aa24.45■■□□□ 1.5
YIF1A-209ENST00000494836 ERVK-7P63135 1459 aa24.45■■□□□ 1.5
YIF1A-209ENST00000494836 IQGAP3Q86VI3 1631 aa24.44■■□□□ 1.5
YIF1A-209ENST00000494836 HSPA2P54652 639 aa24.44■■□□□ 1.5
YIF1A-209ENST00000494836 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
YIF1A-209ENST00000494836 TET3O43151 1660 aa24.43■■□□□ 1.5
YIF1A-209ENST00000494836 NUP155O75694 1391 aa24.42■■□□□ 1.5
YIF1A-209ENST00000494836 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
YIF1A-209ENST00000494836 CFAP65Q6ZU64 1925 aaKnown RBP24.39■■□□□ 1.5
YIF1A-209ENST00000494836 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
YIF1A-209ENST00000494836 NLRP1Q9C000 1473 aa24.38■■□□□ 1.49
YIF1A-209ENST00000494836 RPRD2Q5VT52 1461 aaKnown RBP24.38■■□□□ 1.49
YIF1A-209ENST00000494836 E9PCH4 1651 aa24.32■■□□□ 1.48
YIF1A-209ENST00000494836 NOS1P29475 1434 aa24.31■■□□□ 1.48
YIF1A-209ENST00000494836 TRIM52Q96A61 297 aa24.3■■□□□ 1.48
YIF1A-209ENST00000494836 SYNMO15061 1565 aa24.29■■□□□ 1.48
YIF1A-209ENST00000494836 UGGT1Q9NYU2 1555 aa24.29■■□□□ 1.48
YIF1A-209ENST00000494836 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
YIF1A-209ENST00000494836 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
YIF1A-209ENST00000494836 STRCQ7RTU9 1775 aa24.26■■□□□ 1.47
YIF1A-209ENST00000494836 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
YIF1A-209ENST00000494836 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
YIF1A-209ENST00000494836 UBR1Q8IWV7 1749 aa24.23■■□□□ 1.47
YIF1A-209ENST00000494836 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
YIF1A-209ENST00000494836 RAB3GAP2Q9H2M9 1393 aa24.21■■□□□ 1.47
YIF1A-209ENST00000494836 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
YIF1A-209ENST00000494836 IDI1Q13907 227 aa24.2■■□□□ 1.46
YIF1A-209ENST00000494836 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
YIF1A-209ENST00000494836 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
YIF1A-209ENST00000494836 KDM5AP29375 1690 aaKnown RBP24.19■■□□□ 1.46
YIF1A-209ENST00000494836 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
YIF1A-209ENST00000494836 ADGRB3O60242 1522 aa24.18■■□□□ 1.46
YIF1A-209ENST00000494836 PKD2Q13563 968 aa24.17■■□□□ 1.46
YIF1A-209ENST00000494836 STAG3Q9UJ98 1225 aa24.17■■□□□ 1.46
YIF1A-209ENST00000494836 NCKAP5LQ9HCH0 1330 aa24.16■■□□□ 1.46
YIF1A-209ENST00000494836 POLR1AO95602 1720 aaPredicted RBP24.16■■□□□ 1.46
YIF1A-209ENST00000494836 PTPRTO14522 1441 aa24.16■■□□□ 1.46
YIF1A-209ENST00000494836 TRPM2O94759 1503 aa24.13■■□□□ 1.45
YIF1A-209ENST00000494836 SLIT1O75093 1534 aa24.12■■□□□ 1.45
YIF1A-209ENST00000494836 ANKLE2Q86XL3 938 aa24.12■■□□□ 1.45
YIF1A-209ENST00000494836 MPHOSPH9Q99550 1183 aa24.11■■□□□ 1.45
YIF1A-209ENST00000494836 ARHGAP23Q9P227 1491 aa24.11■■□□□ 1.45
YIF1A-209ENST00000494836 NEURL4Q96JN8 1562 aa24.11■■□□□ 1.45
YIF1A-209ENST00000494836 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
YIF1A-209ENST00000494836 TMEM2Q9UHN6 1383 aa24.09■■□□□ 1.45
YIF1A-209ENST00000494836 HRCP23327 699 aa24.08■■□□□ 1.45
YIF1A-209ENST00000494836 SCAF11Q99590 1463 aaKnown RBP24.07■■□□□ 1.44
YIF1A-209ENST00000494836 MYO5BQ9ULV0 1848 aa24.07■■□□□ 1.44
YIF1A-209ENST00000494836 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
YIF1A-209ENST00000494836 CHGAP10645 457 aaKnown RBP24.06■■□□□ 1.44
YIF1A-209ENST00000494836 MED14O60244 1454 aa24.06■■□□□ 1.44
YIF1A-209ENST00000494836 FOXD1Q16676 465 aa24.05■■□□□ 1.44
YIF1A-209ENST00000494836 EID1Q9Y6B2 187 aa24.05■■□□□ 1.44
YIF1A-209ENST00000494836 NPHP4O75161 1426 aaPredicted RBP24.04■■□□□ 1.44
YIF1A-209ENST00000494836 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
YIF1A-209ENST00000494836 IQGAP1P46940 1657 aa24.03■■□□□ 1.44
YIF1A-209ENST00000494836 TXNDC2Q86VQ3 553 aa24.03■■□□□ 1.44
YIF1A-209ENST00000494836 LTKP29376 864 aa24.01■■□□□ 1.43
YIF1A-209ENST00000494836 ZFYVE9O95405 1425 aa24■■□□□ 1.43
YIF1A-209ENST00000494836 RIMS2Q9UQ26 1411 aa23.99■■□□□ 1.43
YIF1A-209ENST00000494836 KIF1BO60333 1816 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms