RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 HAP1P54257 671 aaPredicted RBP6.77□□□□□ -1.33
LRIF1-203ENST00000494675 ZNF454Q8N9F8 522 aa6.77□□□□□ -1.33
LRIF1-203ENST00000494675 OXER1Q8TDS5 423 aa6.77□□□□□ -1.33
LRIF1-203ENST00000494675 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
LRIF1-203ENST00000494675 PAXIP1Q6ZW49 1069 aaPredicted RBP6.76□□□□□ -1.33
LRIF1-203ENST00000494675 PTPREP23469 700 aa6.76□□□□□ -1.33
LRIF1-203ENST00000494675 CFAP44Q96MT7 982 aa6.76□□□□□ -1.33
LRIF1-203ENST00000494675 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
LRIF1-203ENST00000494675 LARP6Q9BRS8 491 aaKnown RBP6.75□□□□□ -1.33
LRIF1-203ENST00000494675 ZBED2Q9BTP6 218 aa6.74□□□□□ -1.33
LRIF1-203ENST00000494675 SPRYD3Q8NCJ5 442 aa6.74□□□□□ -1.33
LRIF1-203ENST00000494675 NBPF3Q9H094 633 aa6.74□□□□□ -1.33
LRIF1-203ENST00000494675 DDX27Q96GQ7 796 aaKnown RBP6.73□□□□□ -1.33
LRIF1-203ENST00000494675 MAP3K9P80192 1104 aa6.72□□□□□ -1.33
LRIF1-203ENST00000494675 NCKAP5LQ9HCH0 1330 aa6.71□□□□□ -1.34
LRIF1-203ENST00000494675 FOSBP53539 338 aa6.71□□□□□ -1.34
LRIF1-203ENST00000494675 WIPF1O43516 503 aa6.7□□□□□ -1.34
LRIF1-203ENST00000494675 EVI5O60447 810 aa6.7□□□□□ -1.34
LRIF1-203ENST00000494675 MFSD10Q14728 455 aa6.69□□□□□ -1.34
LRIF1-203ENST00000494675 ANKK1Q8NFD2 765 aa6.69□□□□□ -1.34
LRIF1-203ENST00000494675 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
LRIF1-203ENST00000494675 ANO8Q9HCE9 1232 aaPredicted RBP6.68□□□□□ -1.34
LRIF1-203ENST00000494675 POTECB2RU33 542 aa6.67□□□□□ -1.34
LRIF1-203ENST00000494675 ZDHHC16Q969W1 377 aa6.67□□□□□ -1.34
LRIF1-203ENST00000494675 JPH4Q96JJ6 628 aa6.67□□□□□ -1.34
LRIF1-203ENST00000494675 KCNC4Q03721 635 aa6.66□□□□□ -1.34
LRIF1-203ENST00000494675 NYAP1Q6ZVC0 841 aa6.66□□□□□ -1.34
LRIF1-203ENST00000494675 VSIG10Q8N0Z9 540 aa6.65□□□□□ -1.34
LRIF1-203ENST00000494675 ADAM33Q9BZ11 813 aa6.65□□□□□ -1.34
LRIF1-203ENST00000494675 PRKD2Q9BZL6 878 aa6.65□□□□□ -1.34
LRIF1-203ENST00000494675 RABGEF1Q9UJ41 708 aa6.65□□□□□ -1.34
LRIF1-203ENST00000494675 WFS1O76024 890 aa6.64□□□□□ -1.35
LRIF1-203ENST00000494675 PDZRN3Q9UPQ7 1066 aa6.64□□□□□ -1.35
LRIF1-203ENST00000494675 SOWAHBA6NEL2 793 aa6.63□□□□□ -1.35
LRIF1-203ENST00000494675 CADPS2Q86UW7 1296 aa6.63□□□□□ -1.35
LRIF1-203ENST00000494675 BCAMP50895 628 aa6.62□□□□□ -1.35
LRIF1-203ENST00000494675 TYW1BQ6NUM6 668 aa6.62□□□□□ -1.35
LRIF1-203ENST00000494675 LAPTM4BQ86VI4 370 aa6.62□□□□□ -1.35
LRIF1-203ENST00000494675 V9GY48 417 aaPredicted RBP6.62□□□□□ -1.35
LRIF1-203ENST00000494675 TSHZ2Q9NRE2 1034 aa6.62□□□□□ -1.35
LRIF1-203ENST00000494675 PPP1R3GB7ZBB8 358 aa6.61□□□□□ -1.35
LRIF1-203ENST00000494675 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
LRIF1-203ENST00000494675 FBXW7Q969H0 707 aa6.61□□□□□ -1.35
LRIF1-203ENST00000494675 EMILIN3Q9NT22 766 aa6.61□□□□□ -1.35
LRIF1-203ENST00000494675 PHF14O94880 888 aa6.6□□□□□ -1.35
LRIF1-203ENST00000494675 EPAS1Q99814 870 aa6.6□□□□□ -1.35
LRIF1-203ENST00000494675 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
LRIF1-203ENST00000494675 WBP1LQ9NX94 342 aa6.59□□□□□ -1.35
LRIF1-203ENST00000494675 PROX2Q3B8N5 592 aa6.58□□□□□ -1.36
LRIF1-203ENST00000494675 ZFRQ96KR1 1074 aaKnown RBP6.58□□□□□ -1.36
LRIF1-203ENST00000494675 KDM2AQ9Y2K7 1162 aa6.58□□□□□ -1.36
LRIF1-203ENST00000494675 KRTAP1-3Q8IUG1 177 aa6.58□□□□□ -1.36
LRIF1-203ENST00000494675 PCDHGA10Q9Y5H3 936 aa6.58□□□□□ -1.36
LRIF1-203ENST00000494675 CAMK2BQ13554 666 aa6.57□□□□□ -1.36
LRIF1-203ENST00000494675 DPYSL4O14531 572 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 ONECUT3O60422 494 aaPredicted RBP6.56□□□□□ -1.36
LRIF1-203ENST00000494675 MYT1Q01538 1121 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 COL9A1P20849 921 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 WDR70Q9NW82 654 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 KIAA1468Q9P260 1216 aa6.56□□□□□ -1.36
LRIF1-203ENST00000494675 TSR3Q9UJK0 312 aaKnown RBP6.55□□□□□ -1.36
LRIF1-203ENST00000494675 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
LRIF1-203ENST00000494675 SPDYE16A6NNV3 312 aaPredicted RBP6.54□□□□□ -1.36
LRIF1-203ENST00000494675 C6orf132Q5T0Z8 1188 aa6.52□□□□□ -1.37
LRIF1-203ENST00000494675 RBM33Q96EV2 1170 aaKnown RBP6.52□□□□□ -1.37
LRIF1-203ENST00000494675 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.52□□□□□ -1.37
LRIF1-203ENST00000494675 HPS5Q9UPZ3 1129 aa6.52□□□□□ -1.37
LRIF1-203ENST00000494675 NFX1Q12986 1120 aaKnown RBP6.52□□□□□ -1.37
LRIF1-203ENST00000494675 LRCH3Q96II8 777 aa6.51□□□□□ -1.37
LRIF1-203ENST00000494675 DGAT1O75907 488 aa6.5□□□□□ -1.37
LRIF1-203ENST00000494675 FAM98CQ17RN3 349 aaKnown RBP6.5□□□□□ -1.37
LRIF1-203ENST00000494675 DDX12PQ92771 950 aa6.5□□□□□ -1.37
LRIF1-203ENST00000494675 SEPT9Q9UHD8 586 aaPredicted RBP6.5□□□□□ -1.37
LRIF1-203ENST00000494675 BCANQ96GW7 911 aa6.5□□□□□ -1.37
LRIF1-203ENST00000494675 E2F4Q16254 413 aa6.49□□□□□ -1.37
LRIF1-203ENST00000494675 TRIM6-TRIM34B2RNG4 842 aa6.48□□□□□ -1.37
LRIF1-203ENST00000494675 NBR1Q14596 966 aa6.48□□□□□ -1.37
LRIF1-203ENST00000494675 MAP3K7O43318 606 aa6.48□□□□□ -1.37
LRIF1-203ENST00000494675 PACS2Q86VP3 889 aa6.48□□□□□ -1.37
LRIF1-203ENST00000494675 PPP4CP60510 307 aa6.47□□□□□ -1.37
LRIF1-203ENST00000494675 PDIA6Q15084 440 aa6.47□□□□□ -1.37
LRIF1-203ENST00000494675 PKDCCQ504Y2 493 aa6.47□□□□□ -1.37
LRIF1-203ENST00000494675 TJAP1Q5JTD0 557 aa6.46□□□□□ -1.37
LRIF1-203ENST00000494675 EN1Q05925 392 aaPredicted RBP6.46□□□□□ -1.38
LRIF1-203ENST00000494675 PPP1R18Q6NYC8 613 aa6.46□□□□□ -1.38
LRIF1-203ENST00000494675 CERKQ8TCT0 537 aa6.44□□□□□ -1.38
LRIF1-203ENST00000494675 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.44□□□□□ -1.38
LRIF1-203ENST00000494675 IL21Q9HBE4 155 aa6.44□□□□□ -1.38
LRIF1-203ENST00000494675 ARIH1Q9Y4X5 557 aaPredicted RBP6.44□□□□□ -1.38
LRIF1-203ENST00000494675 GRXCR2A6NFK2 248 aa6.43□□□□□ -1.38
LRIF1-203ENST00000494675 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
LRIF1-203ENST00000494675 MTRQ99707 1265 aa6.42□□□□□ -1.38
LRIF1-203ENST00000494675 PRSS12P56730 875 aa6.41□□□□□ -1.38
LRIF1-203ENST00000494675 TSR1Q2NL82 804 aaKnown RBP6.41□□□□□ -1.38
LRIF1-203ENST00000494675 HDGFP51858 240 aaKnown RBP6.4□□□□□ -1.38
LRIF1-203ENST00000494675 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
LRIF1-203ENST00000494675 NBPF26B4DH59 902 aa6.4□□□□□ -1.39
LRIF1-203ENST00000494675 CDCA7LQ96GN5 454 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms