RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 DNMT1P26358 1616 aaKnown RBP6.23□□□□□ -1.41
PRKD3-210ENST00000494667 MRE11P49959 708 aa6.23□□□□□ -1.41
PRKD3-210ENST00000494667 NPM2Q86SE8 214 aaKnown RBP6.23□□□□□ -1.41
PRKD3-210ENST00000494667 EPRSP07814 1512 aaKnown RBP6.22□□□□□ -1.41
PRKD3-210ENST00000494667 RALBP1Q15311 655 aa6.22□□□□□ -1.41
PRKD3-210ENST00000494667 MYBBP1AQ9BQG0 1328 aaKnown RBP6.22□□□□□ -1.41
PRKD3-210ENST00000494667 ADGBQ8N7X0 1667 aa6.22□□□□□ -1.41
PRKD3-210ENST00000494667 NCOA3Q9Y6Q9 1424 aa6.22□□□□□ -1.41
PRKD3-210ENST00000494667 CEP170Q5SW79 1584 aa6.22□□□□□ -1.41
PRKD3-210ENST00000494667 IBTKQ9P2D0 1353 aaPredicted RBP6.22□□□□□ -1.41
PRKD3-210ENST00000494667 NAP1L5Q96NT1 182 aaPredicted RBP6.21□□□□□ -1.41
PRKD3-210ENST00000494667 POGKQ9P215 609 aa6.21□□□□□ -1.42
PRKD3-210ENST00000494667 CAMSAP2Q08AD1 1489 aa6.21□□□□□ -1.42
PRKD3-210ENST00000494667 ABCC2Q92887 1545 aa6.21□□□□□ -1.42
PRKD3-210ENST00000494667 GOLGA6L3A6NEY3 463 aa6.21□□□□□ -1.42
PRKD3-210ENST00000494667 KIAA1107Q9UPP5 1409 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 ESPNB1AK53 854 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 FAM50AQ14320 339 aaKnown RBP6.2□□□□□ -1.42
PRKD3-210ENST00000494667 CARMIL1Q5VZK9 1371 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 YEATS2Q9ULM3 1422 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 NINLQ9Y2I6 1382 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 HS1BP3Q53T59 392 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 KDM5DQ9BY66 1539 aa6.2□□□□□ -1.42
PRKD3-210ENST00000494667 CROCC2H7BZ55 1655 aa6.19□□□□□ -1.42
PRKD3-210ENST00000494667 FHOD3Q2V2M9 1422 aa6.19□□□□□ -1.42
PRKD3-210ENST00000494667 OFD1O75665 1012 aa6.19□□□□□ -1.42
PRKD3-210ENST00000494667 L3MBTL2Q969R5 705 aa6.19□□□□□ -1.42
PRKD3-210ENST00000494667 PPP1R9BQ96SB3 815 aa6.19□□□□□ -1.42
PRKD3-210ENST00000494667 BECN1Q14457 450 aa6.18□□□□□ -1.42
PRKD3-210ENST00000494667 NCLP19338 710 aaKnown RBP6.18□□□□□ -1.42
PRKD3-210ENST00000494667 NBPF8Q3BBV2 869 aa6.18□□□□□ -1.42
PRKD3-210ENST00000494667 RTEL1-TNFRSF6BF6WH68 1400 aa6.18□□□□□ -1.42
PRKD3-210ENST00000494667 PZPP20742 1482 aa6.18□□□□□ -1.42
PRKD3-210ENST00000494667 PDE4CQ08493 712 aa6.18□□□□□ -1.42
PRKD3-210ENST00000494667 ITSN2Q9NZM3 1697 aa6.18□□□□□ -1.42
PRKD3-210ENST00000494667 MAGI3Q5TCQ9 1506 aa6.17□□□□□ -1.42
PRKD3-210ENST00000494667 PTMSP20962 102 aa6.17□□□□□ -1.42
PRKD3-210ENST00000494667 VGFO15240 615 aaPredicted RBP6.17□□□□□ -1.42
PRKD3-210ENST00000494667 ERBB4Q15303 1308 aa6.17□□□□□ -1.42
PRKD3-210ENST00000494667 USP47Q96K76 1375 aa6.17□□□□□ -1.42
PRKD3-210ENST00000494667 ADGRL2O95490 1459 aa6.17□□□□□ -1.42
PRKD3-210ENST00000494667 POLA1P09884 1462 aaPredicted RBP6.17□□□□□ -1.42
PRKD3-210ENST00000494667 DMTNQ08495 405 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 MTUS2Q5JR59 1369 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 ABCA10Q8WWZ4 1543 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 TRPM1Q7Z4N2 1603 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 ZNF521Q96K83 1311 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 MAPK8IP3Q9UPT6 1336 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 MCM4P33991 863 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 DDIT3P35638 169 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 RIPK4P57078 832 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.16□□□□□ -1.42
PRKD3-210ENST00000494667 CRBNQ96SW2 442 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
PRKD3-210ENST00000494667 UHRF1BP1LA0JNW5 1464 aa6.15□□□□□ -1.42
PRKD3-210ENST00000494667 GRPEL1Q9HAV7 217 aa6.15□□□□□ -1.42
PRKD3-210ENST00000494667 ABCC10Q5T3U5 1492 aa6.15□□□□□ -1.42
PRKD3-210ENST00000494667 ANKRD30AQ9BXX3 1397 aa6.15□□□□□ -1.42
PRKD3-210ENST00000494667 ZNF500O60304 480 aaPredicted RBP6.15□□□□□ -1.43
PRKD3-210ENST00000494667 NLRP13Q86W25 1043 aa6.15□□□□□ -1.43
PRKD3-210ENST00000494667 DDX11L8A8MPP1 907 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 KIF20AO95235 890 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 NESP48681 1621 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 EIF4G3O43432 1585 aaKnown RBP6.14□□□□□ -1.43
PRKD3-210ENST00000494667 DYNC1I1O14576 645 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 CCDC173Q0VFZ6 552 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 CLEC17AQ6ZS10 378 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
PRKD3-210ENST00000494667 SLC4A3P48751 1232 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 TBC1D32Q96NH3 1257 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 GTPBP4Q9BZE4 634 aaKnown RBP6.14□□□□□ -1.43
PRKD3-210ENST00000494667 MYH16Q9H6N6 1097 aa6.14□□□□□ -1.43
PRKD3-210ENST00000494667 TMC1Q8TDI8 760 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 PDIA4P13667 645 aaKnown RBP6.13□□□□□ -1.43
PRKD3-210ENST00000494667 MCM5P33992 734 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 TAF3Q5VWG9 929 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 ZSCAN30Q86W11 494 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 COL17A1Q9UMD9 1497 aaPredicted RBP6.13□□□□□ -1.43
PRKD3-210ENST00000494667 DAPK1P53355 1430 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 PRDM15P57071 1507 aaPredicted RBP6.13□□□□□ -1.43
PRKD3-210ENST00000494667 RNF17Q9BXT8 1623 aaKnown RBP6.13□□□□□ -1.43
PRKD3-210ENST00000494667 ZNF692Q9BU19 519 aaPredicted RBP6.13□□□□□ -1.43
PRKD3-210ENST00000494667 PANK2Q9BZ23 570 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 GPRASP1Q5JY77 1395 aa6.13□□□□□ -1.43
PRKD3-210ENST00000494667 SKOR2Q2VWA4 1001 aaPredicted RBP6.12□□□□□ -1.43
PRKD3-210ENST00000494667 KIAA1211Q6ZU35 1233 aa6.12□□□□□ -1.43
PRKD3-210ENST00000494667 CHMP5Q9NZZ3 219 aa6.12□□□□□ -1.43
PRKD3-210ENST00000494667 CIZ1Q9ULV3 898 aaPredicted RBP6.12□□□□□ -1.43
PRKD3-210ENST00000494667 TAF7LQ5H9L4 462 aa6.12□□□□□ -1.43
PRKD3-210ENST00000494667 ADCY10Q96PN6 1610 aa6.12□□□□□ -1.43
PRKD3-210ENST00000494667 IPO4Q8TEX9 1081 aaKnown RBP6.12□□□□□ -1.43
PRKD3-210ENST00000494667 REREQ9P2R6 1566 aa6.12□□□□□ -1.43
PRKD3-210ENST00000494667 ZNF326Q5BKZ1 582 aaKnown RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 TRAK2O60296 914 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 GTF2E1P29083 439 aaPredicted RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 RGS3P49796 1198 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 EIF2AK4Q9P2K8 1649 aaKnown RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 DNMBPQ6XZF7 1577 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 PTPRGP23470 1445 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 SLC20A2Q08357 652 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms