RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 ERBINQ96RT1 1412 aa31.84■■■□□ 2.69
CCDC12-207ENST00000494655 CEBPAP49715 358 aaPredicted RBP31.83■■■□□ 2.69
CCDC12-207ENST00000494655 LMTK3Q96Q04 1460 aa31.83■■■□□ 2.69
CCDC12-207ENST00000494655 ZC3H13Q5T200 1668 aaKnown RBP31.82■■■□□ 2.68
CCDC12-207ENST00000494655 ADGRL2O95490 1459 aa31.81■■■□□ 2.68
CCDC12-207ENST00000494655 RRP7BPQ9NSQ0 103 aa31.8■■■□□ 2.68
CCDC12-207ENST00000494655 CHIC2Q9UKJ5 165 aa31.8■■■□□ 2.68
CCDC12-207ENST00000494655 ZMYM3Q14202 1370 aa31.79■■■□□ 2.68
CCDC12-207ENST00000494655 UHRF1BP1Q6BDS2 1440 aa31.77■■■□□ 2.68
CCDC12-207ENST00000494655 SETD1BQ9UPS6 1966 aaKnown RBP31.77■■■□□ 2.68
CCDC12-207ENST00000494655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.77■■■□□ 2.68
CCDC12-207ENST00000494655 NPATQ14207 1427 aa31.76■■■□□ 2.68
CCDC12-207ENST00000494655 NCOA1Q15788 1441 aa31.75■■■□□ 2.67
CCDC12-207ENST00000494655 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
CCDC12-207ENST00000494655 PRDM15P57071 1507 aaPredicted RBP31.72■■■□□ 2.67
CCDC12-207ENST00000494655 MROH1Q8NDA8 1641 aa31.71■■■□□ 2.67
CCDC12-207ENST00000494655 RRBP1Q9P2E9 1410 aaKnown RBP31.7■■■□□ 2.67
CCDC12-207ENST00000494655 DEPDC5O75140 1603 aa31.7■■■□□ 2.66
CCDC12-207ENST00000494655 ABCC3O15438 1527 aa31.69■■■□□ 2.66
CCDC12-207ENST00000494655 CEP152O94986 1710 aa31.68■■■□□ 2.66
CCDC12-207ENST00000494655 PZPP20742 1482 aa31.66■■■□□ 2.66
CCDC12-207ENST00000494655 MYO3AQ8NEV4 1616 aa31.66■■■□□ 2.66
CCDC12-207ENST00000494655 PTPRKQ15262 1439 aa31.66■■■□□ 2.66
CCDC12-207ENST00000494655 ROCK1Q13464 1354 aa31.65■■■□□ 2.66
CCDC12-207ENST00000494655 KANK1Q14678 1352 aa31.65■■■□□ 2.66
CCDC12-207ENST00000494655 CAMSAP1Q5T5Y3 1602 aa31.64■■■□□ 2.66
CCDC12-207ENST00000494655 ITGAEP38570 1179 aa31.64■■■□□ 2.66
CCDC12-207ENST00000494655 ANKRD50Q9ULJ7 1429 aa31.63■■■□□ 2.65
CCDC12-207ENST00000494655 ZNF142P52746 1687 aaPredicted RBP31.6■■■□□ 2.65
CCDC12-207ENST00000494655 HSPA2P54652 639 aa31.59■■■□□ 2.65
CCDC12-207ENST00000494655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.57■■■□□ 2.647e-8■■■■□ 24.8
CCDC12-207ENST00000494655 CEP170BQ9Y4F5 1589 aaPredicted RBP31.56■■■□□ 2.64
CCDC12-207ENST00000494655 TNRQ92752 1358 aa31.53■■■□□ 2.64
CCDC12-207ENST00000494655 UNC13BO14795 1591 aa31.51■■■□□ 2.63
CCDC12-207ENST00000494655 VWDEQ8N2E2 1590 aa31.5■■■□□ 2.63
CCDC12-207ENST00000494655 LMTK2Q8IWU2 1503 aa31.49■■■□□ 2.63
CCDC12-207ENST00000494655 SPATA31D1Q6ZQQ2 1576 aa31.48■■■□□ 2.63
CCDC12-207ENST00000494655 A2ML1A8K2U0 1454 aa31.46■■■□□ 2.63
CCDC12-207ENST00000494655 ERVK-7P63135 1459 aa31.46■■■□□ 2.63
CCDC12-207ENST00000494655 FBXO31Q5XUX0 539 aaPredicted RBP31.46■■■□□ 2.63
CCDC12-207ENST00000494655 ARHGAP31Q2M1Z3 1444 aa31.46■■■□□ 2.63
CCDC12-207ENST00000494655 NLRP1Q9C000 1473 aa31.46■■■□□ 2.63
CCDC12-207ENST00000494655 GCC2Q8IWJ2 1684 aa31.45■■■□□ 2.63
CCDC12-207ENST00000494655 EFCAB6Q5THR3 1501 aa31.44■■■□□ 2.62
CCDC12-207ENST00000494655 CFAP65Q6ZU64 1925 aaKnown RBP31.41■■■□□ 2.62
CCDC12-207ENST00000494655 TET3O43151 1660 aa31.41■■■□□ 2.62
CCDC12-207ENST00000494655 STRCQ7RTU9 1775 aa31.4■■■□□ 2.62
CCDC12-207ENST00000494655 DMRT2Q9Y5R5 561 aa31.37■■■□□ 2.61
CCDC12-207ENST00000494655 PLA2R1Q13018 1463 aa31.37■■■□□ 2.61
CCDC12-207ENST00000494655 IQGAP3Q86VI3 1631 aa31.37■■■□□ 2.61
CCDC12-207ENST00000494655 UGGT1Q9NYU2 1555 aa31.34■■■□□ 2.61
CCDC12-207ENST00000494655 RPRD2Q5VT52 1461 aaKnown RBP31.34■■■□□ 2.61
CCDC12-207ENST00000494655 HFM1A2PYH4 1435 aa31.31■■■□□ 2.6
CCDC12-207ENST00000494655 NAIPQ13075 1403 aa31.31■■■□□ 2.6
CCDC12-207ENST00000494655 POLR1AO95602 1720 aaPredicted RBP31.29■■■□□ 2.6
CCDC12-207ENST00000494655 NUP155O75694 1391 aa31.29■■■□□ 2.6
CCDC12-207ENST00000494655 PTPRTO14522 1441 aa31.25■■■□□ 2.59
CCDC12-207ENST00000494655 UBR1Q8IWV7 1749 aa31.25■■■□□ 2.59
CCDC12-207ENST00000494655 PKD2Q13563 968 aa31.25■■■□□ 2.59
CCDC12-207ENST00000494655 THEMISQ8N1K5 641 aaPredicted RBP31.25■■■□□ 2.59
CCDC12-207ENST00000494655 E9PCH4 1651 aa31.24■■■□□ 2.59
CCDC12-207ENST00000494655 SYNMO15061 1565 aa31.22■■■□□ 2.59
CCDC12-207ENST00000494655 PIK3C2BO00750 1634 aa31.22■■■□□ 2.59
CCDC12-207ENST00000494655 KDM5AP29375 1690 aaKnown RBP31.21■■■□□ 2.59
CCDC12-207ENST00000494655 NOS1P29475 1434 aa31.21■■■□□ 2.59
CCDC12-207ENST00000494655 NCKAP5LQ9HCH0 1330 aa31.18■■■□□ 2.58
CCDC12-207ENST00000494655 STAG3Q9UJ98 1225 aa31.17■■■□□ 2.58
CCDC12-207ENST00000494655 ADGRB3O60242 1522 aa31.14■■■□□ 2.57
CCDC12-207ENST00000494655 ANKLE2Q86XL3 938 aa31.13■■■□□ 2.57
CCDC12-207ENST00000494655 SLC52A1Q9NWF4 448 aa31.12■■■□□ 2.57
CCDC12-207ENST00000494655 NEURL4Q96JN8 1562 aa31.12■■■□□ 2.57
CCDC12-207ENST00000494655 SPHKAPQ2M3C7 1700 aa31.1■■■□□ 2.57
CCDC12-207ENST00000494655 TRIM52Q96A61 297 aa31.1■■■□□ 2.57
CCDC12-207ENST00000494655 SLIT1O75093 1534 aa31.08■■■□□ 2.57
CCDC12-207ENST00000494655 IQGAP1P46940 1657 aa31.07■■■□□ 2.56
CCDC12-207ENST00000494655 IDI1Q13907 227 aa31.06■■■□□ 2.56
CCDC12-207ENST00000494655 SCAF11Q99590 1463 aaKnown RBP31.05■■■□□ 2.56
CCDC12-207ENST00000494655 ARHGAP23Q9P227 1491 aa31.04■■■□□ 2.56
CCDC12-207ENST00000494655 NPHP4O75161 1426 aaPredicted RBP31.04■■■□□ 2.56
CCDC12-207ENST00000494655 ACIN1Q9UKV3 1341 aaKnown RBP31.03■■■□□ 2.56
CCDC12-207ENST00000494655 MED14O60244 1454 aa31.03■■■□□ 2.56
CCDC12-207ENST00000494655 EID1Q9Y6B2 187 aa31.02■■■□□ 2.56
CCDC12-207ENST00000494655 TMEM2Q9UHN6 1383 aa31.01■■■□□ 2.55
CCDC12-207ENST00000494655 MYO5BQ9ULV0 1848 aa30.99■■■□□ 2.55
CCDC12-207ENST00000494655 SETD5Q9C0A6 1442 aa30.98■■■□□ 2.55
CCDC12-207ENST00000494655 TMEM131LA2VDJ0 1609 aa30.98■■■□□ 2.55
CCDC12-207ENST00000494655 SLC4A1APQ9BWU0 796 aaKnown RBP30.96■■■□□ 2.55
CCDC12-207ENST00000494655 TRPM2O94759 1503 aa30.96■■■□□ 2.55
CCDC12-207ENST00000494655 TXNDC2Q86VQ3 553 aa30.95■■■□□ 2.55
CCDC12-207ENST00000494655 CHGAP10645 457 aaKnown RBP30.93■■■□□ 2.54
CCDC12-207ENST00000494655 CERKQ8TCT0 537 aa30.93■■■□□ 2.54
CCDC12-207ENST00000494655 LTBP4Q8N2S1 1624 aa30.92■■■□□ 2.54
CCDC12-207ENST00000494655 ZNF335Q9H4Z2 1342 aaPredicted RBP30.9■■■□□ 2.54
CCDC12-207ENST00000494655 CLTCL1P53675 1640 aa30.88■■■□□ 2.53
CCDC12-207ENST00000494655 HDGFP51858 240 aaKnown RBP30.88■■■□□ 2.53
CCDC12-207ENST00000494655 KIF1BO60333 1816 aa30.87■■■□□ 2.53
CCDC12-207ENST00000494655 LTKP29376 864 aa30.87■■■□□ 2.53
CCDC12-207ENST00000494655 RAB3GAP2Q9H2M9 1393 aa30.86■■■□□ 2.53
CCDC12-207ENST00000494655 CPS1P31327 1500 aa30.85■■■□□ 2.53
CCDC12-207ENST00000494655 RIMS2Q9UQ26 1411 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms