RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 TRIM52Q96A61 297 aa18.47■□□□□ 0.55
TRIM59-206ENST00000494486 STRCP1A6NGW2 1772 aa18.47■□□□□ 0.55
TRIM59-206ENST00000494486 NLRP1Q9C000 1473 aa18.46■□□□□ 0.55
TRIM59-206ENST00000494486 HNRNPMP52272 730 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRIM59-206ENST00000494486 ZNF772Q68DY9 489 aaPredicted RBP18.46■□□□□ 0.55
TRIM59-206ENST00000494486 ZNF777Q9ULD5 760 aaPredicted RBP18.46■□□□□ 0.55
TRIM59-206ENST00000494486 IQGAP1P46940 1657 aa18.46■□□□□ 0.55
TRIM59-206ENST00000494486 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
TRIM59-206ENST00000494486 UGGT1Q9NYU2 1555 aa18.46■□□□□ 0.55
TRIM59-206ENST00000494486 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
TRIM59-206ENST00000494486 PZPP20742 1482 aa18.44■□□□□ 0.54
TRIM59-206ENST00000494486 JCADQ9P266 1359 aa18.41■□□□□ 0.54
TRIM59-206ENST00000494486 RXRBP28702 533 aa18.4■□□□□ 0.54
TRIM59-206ENST00000494486 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
TRIM59-206ENST00000494486 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
TRIM59-206ENST00000494486 KDM5DQ9BY66 1539 aa18.39■□□□□ 0.53
TRIM59-206ENST00000494486 FOXD1Q16676 465 aa18.37■□□□□ 0.53
TRIM59-206ENST00000494486 INO80Q9ULG1 1556 aaPredicted RBP18.37■□□□□ 0.53
TRIM59-206ENST00000494486 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
TRIM59-206ENST00000494486 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
TRIM59-206ENST00000494486 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
TRIM59-206ENST00000494486 CDK12Q9NYV4 1490 aaPredicted RBP18.34■□□□□ 0.53
TRIM59-206ENST00000494486 DHX29Q7Z478 1369 aaKnown RBP18.34■□□□□ 0.53
TRIM59-206ENST00000494486 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
TRIM59-206ENST00000494486 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
TRIM59-206ENST00000494486 KIF3BO15066 747 aa18.32■□□□□ 0.52
TRIM59-206ENST00000494486 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
TRIM59-206ENST00000494486 EEA1Q15075 1411 aa18.32■□□□□ 0.52
TRIM59-206ENST00000494486 TMEM94Q12767 1356 aa18.31■□□□□ 0.52
TRIM59-206ENST00000494486 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
TRIM59-206ENST00000494486 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
TRIM59-206ENST00000494486 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
TRIM59-206ENST00000494486 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
TRIM59-206ENST00000494486 ZC3H13Q5T200 1668 aaKnown RBP18.29■□□□□ 0.52
TRIM59-206ENST00000494486 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
TRIM59-206ENST00000494486 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
TRIM59-206ENST00000494486 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
TRIM59-206ENST00000494486 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
TRIM59-206ENST00000494486 SLAIN2Q9P270 581 aa18.27■□□□□ 0.52
TRIM59-206ENST00000494486 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
TRIM59-206ENST00000494486 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
TRIM59-206ENST00000494486 LTKP29376 864 aa18.26■□□□□ 0.51
TRIM59-206ENST00000494486 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
TRIM59-206ENST00000494486 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
TRIM59-206ENST00000494486 LRP6O75581 1613 aa18.25■□□□□ 0.51
TRIM59-206ENST00000494486 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
TRIM59-206ENST00000494486 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
TRIM59-206ENST00000494486 KCNA6P17658 529 aa18.24■□□□□ 0.51
TRIM59-206ENST00000494486 EID1Q9Y6B2 187 aa18.24■□□□□ 0.51
TRIM59-206ENST00000494486 PHLPP1O60346 1717 aa18.22■□□□□ 0.51
TRIM59-206ENST00000494486 LRRIQ1Q96JM4 1722 aa18.21■□□□□ 0.51
TRIM59-206ENST00000494486 MSH6P52701 1360 aa18.2■□□□□ 0.5
TRIM59-206ENST00000494486 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
TRIM59-206ENST00000494486 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
TRIM59-206ENST00000494486 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
TRIM59-206ENST00000494486 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
TRIM59-206ENST00000494486 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
TRIM59-206ENST00000494486 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
TRIM59-206ENST00000494486 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
TRIM59-206ENST00000494486 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
TRIM59-206ENST00000494486 SLIT1O75093 1534 aa18.17■□□□□ 0.5
TRIM59-206ENST00000494486 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
TRIM59-206ENST00000494486 CASKIN1Q8WXD9 1431 aa18.16■□□□□ 0.5
TRIM59-206ENST00000494486 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
TRIM59-206ENST00000494486 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
TRIM59-206ENST00000494486 AFF2P51816 1311 aa18.15■□□□□ 0.5
TRIM59-206ENST00000494486 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
TRIM59-206ENST00000494486 NCOA2Q15596 1464 aa18.14■□□□□ 0.5
TRIM59-206ENST00000494486 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
TRIM59-206ENST00000494486 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
TRIM59-206ENST00000494486 RGS12O14924 1447 aa18.14■□□□□ 0.49
TRIM59-206ENST00000494486 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
TRIM59-206ENST00000494486 SETBP1Q9Y6X0 1596 aa18.13■□□□□ 0.49
TRIM59-206ENST00000494486 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
TRIM59-206ENST00000494486 QTRT2Q9H974 415 aaKnown RBP18.12■□□□□ 0.49
TRIM59-206ENST00000494486 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
TRIM59-206ENST00000494486 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
TRIM59-206ENST00000494486 ABCC3O15438 1527 aa18.1■□□□□ 0.49
TRIM59-206ENST00000494486 NKTRP30414 1462 aaKnown RBP18.09■□□□□ 0.49
TRIM59-206ENST00000494486 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
TRIM59-206ENST00000494486 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
TRIM59-206ENST00000494486 CCDC125Q86Z20 511 aa18.08■□□□□ 0.48
TRIM59-206ENST00000494486 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
TRIM59-206ENST00000494486 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.48
TRIM59-206ENST00000494486 TIAM1Q13009 1591 aa18.07■□□□□ 0.48
TRIM59-206ENST00000494486 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
TRIM59-206ENST00000494486 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
TRIM59-206ENST00000494486 STAG3Q9UJ98 1225 aa18.03■□□□□ 0.48
TRIM59-206ENST00000494486 AHDC1Q5TGY3 1603 aaPredicted RBP18.02■□□□□ 0.48
TRIM59-206ENST00000494486 NCOA3Q9Y6Q9 1424 aa18.01■□□□□ 0.47
TRIM59-206ENST00000494486 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
TRIM59-206ENST00000494486 TET3O43151 1660 aa18■□□□□ 0.47
TRIM59-206ENST00000494486 CADPS2Q86UW7 1296 aa18■□□□□ 0.47
TRIM59-206ENST00000494486 CCDC141Q6ZP82 1450 aa18■□□□□ 0.47
TRIM59-206ENST00000494486 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
TRIM59-206ENST00000494486 NWD1Q149M9 1564 aa18■□□□□ 0.47
TRIM59-206ENST00000494486 CAMSAP2Q08AD1 1489 aa17.98■□□□□ 0.47
TRIM59-206ENST00000494486 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
TRIM59-206ENST00000494486 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
TRIM59-206ENST00000494486 ATF3P18847 181 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms