RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 AFAP1Q8N556 730 aa13.21□□□□□ -0.29
GPATCH4-207ENST00000494414 FAM135AQ9P2D6 1515 aa13.21□□□□□ -0.29
GPATCH4-207ENST00000494414 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.3
GPATCH4-207ENST00000494414 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.3
GPATCH4-207ENST00000494414 PTPRMP28827 1452 aa13.2□□□□□ -0.3
GPATCH4-207ENST00000494414 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
GPATCH4-207ENST00000494414 A2MP01023 1474 aa13.18□□□□□ -0.3
GPATCH4-207ENST00000494414 C3P01024 1663 aa13.18□□□□□ -0.3
GPATCH4-207ENST00000494414 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
GPATCH4-207ENST00000494414 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
GPATCH4-207ENST00000494414 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
GPATCH4-207ENST00000494414 HNRNPMP52272 730 aaKnown RBP eCLIP13.15□□□□□ -0.3
GPATCH4-207ENST00000494414 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-207ENST00000494414 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
GPATCH4-207ENST00000494414 SPAG9O60271 1321 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-207ENST00000494414 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-207ENST00000494414 ABCC5O15440 1437 aa13.13□□□□□ -0.31
GPATCH4-207ENST00000494414 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
GPATCH4-207ENST00000494414 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
GPATCH4-207ENST00000494414 DAPK1P53355 1430 aa13.13□□□□□ -0.31
GPATCH4-207ENST00000494414 CLTCQ00610 1675 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-207ENST00000494414 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
GPATCH4-207ENST00000494414 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
GPATCH4-207ENST00000494414 KDM5DQ9BY66 1539 aa13.11□□□□□ -0.31
GPATCH4-207ENST00000494414 DHX29Q7Z478 1369 aaKnown RBP13.1□□□□□ -0.31
GPATCH4-207ENST00000494414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.1□□□□□ -0.31
GPATCH4-207ENST00000494414 DUOX2Q9NRD8 1548 aa13.1□□□□□ -0.31
GPATCH4-207ENST00000494414 ZNF142P52746 1687 aaPredicted RBP13.1□□□□□ -0.31
GPATCH4-207ENST00000494414 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
GPATCH4-207ENST00000494414 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
GPATCH4-207ENST00000494414 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
GPATCH4-207ENST00000494414 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
GPATCH4-207ENST00000494414 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
GPATCH4-207ENST00000494414 SETD1BQ9UPS6 1966 aaKnown RBP13.06□□□□□ -0.32
GPATCH4-207ENST00000494414 CEP152O94986 1710 aa13.05□□□□□ -0.32
GPATCH4-207ENST00000494414 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
GPATCH4-207ENST00000494414 ABCC3O15438 1527 aa13.04□□□□□ -0.32
GPATCH4-207ENST00000494414 UNC13BO14795 1591 aa13.04□□□□□ -0.32
GPATCH4-207ENST00000494414 CAMSAP1Q5T5Y3 1602 aa13.04□□□□□ -0.32
GPATCH4-207ENST00000494414 NPATQ14207 1427 aa13.04□□□□□ -0.32
GPATCH4-207ENST00000494414 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
GPATCH4-207ENST00000494414 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
GPATCH4-207ENST00000494414 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
GPATCH4-207ENST00000494414 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.32
GPATCH4-207ENST00000494414 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
GPATCH4-207ENST00000494414 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
GPATCH4-207ENST00000494414 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
GPATCH4-207ENST00000494414 PZPP20742 1482 aa13□□□□□ -0.33
GPATCH4-207ENST00000494414 ROCK1Q13464 1354 aa13□□□□□ -0.33
GPATCH4-207ENST00000494414 ABCB7O75027 752 aa12.99□□□□□ -0.33
GPATCH4-207ENST00000494414 STRCQ7RTU9 1775 aa12.98□□□□□ -0.33
GPATCH4-207ENST00000494414 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
GPATCH4-207ENST00000494414 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
GPATCH4-207ENST00000494414 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
GPATCH4-207ENST00000494414 ANKRD30AQ9BXX3 1397 aa12.96□□□□□ -0.33
GPATCH4-207ENST00000494414 IQGAP3Q86VI3 1631 aa12.96□□□□□ -0.33
GPATCH4-207ENST00000494414 CEP170BQ9Y4F5 1589 aaPredicted RBP12.96□□□□□ -0.33
GPATCH4-207ENST00000494414 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
GPATCH4-207ENST00000494414 TET3O43151 1660 aa12.96□□□□□ -0.34
GPATCH4-207ENST00000494414 KDM5AP29375 1690 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-207ENST00000494414 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
GPATCH4-207ENST00000494414 DSG3P32926 999 aa12.94□□□□□ -0.34
GPATCH4-207ENST00000494414 MLECQ14165 292 aa12.94□□□□□ -0.34
GPATCH4-207ENST00000494414 POLA2Q14181 598 aa12.93□□□□□ -0.34
GPATCH4-207ENST00000494414 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
GPATCH4-207ENST00000494414 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
GPATCH4-207ENST00000494414 HRCP23327 699 aa12.92□□□□□ -0.34
GPATCH4-207ENST00000494414 UHRF1BP1Q6BDS2 1440 aa12.92□□□□□ -0.34
GPATCH4-207ENST00000494414 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
GPATCH4-207ENST00000494414 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
GPATCH4-207ENST00000494414 PLA2R1Q13018 1463 aa12.91□□□□□ -0.34
GPATCH4-207ENST00000494414 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
GPATCH4-207ENST00000494414 SYNMO15061 1565 aa12.9□□□□□ -0.34
GPATCH4-207ENST00000494414 KIF3BO15066 747 aa12.9□□□□□ -0.34
GPATCH4-207ENST00000494414 PIK3C2BO00750 1634 aa12.9□□□□□ -0.34
GPATCH4-207ENST00000494414 A2ML1A8K2U0 1454 aa12.9□□□□□ -0.34
GPATCH4-207ENST00000494414 E9PCH4 1651 aa12.89□□□□□ -0.35
GPATCH4-207ENST00000494414 NLRP1Q9C000 1473 aa12.89□□□□□ -0.35
GPATCH4-207ENST00000494414 CEBPAP49715 358 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-207ENST00000494414 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-207ENST00000494414 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
GPATCH4-207ENST00000494414 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
GPATCH4-207ENST00000494414 NOS1P29475 1434 aa12.87□□□□□ -0.35
GPATCH4-207ENST00000494414 NAIPQ13075 1403 aa12.87□□□□□ -0.35
GPATCH4-207ENST00000494414 GGT6Q6P531 493 aa12.86□□□□□ -0.35
GPATCH4-207ENST00000494414 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
GPATCH4-207ENST00000494414 RRP7BPQ9NSQ0 103 aa12.85□□□□□ -0.35
GPATCH4-207ENST00000494414 TNRQ92752 1358 aa12.84□□□□□ -0.35
GPATCH4-207ENST00000494414 CFAP65Q6ZU64 1925 aaKnown RBP12.83□□□□□ -0.36
GPATCH4-207ENST00000494414 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
GPATCH4-207ENST00000494414 ARHGAP23Q9P227 1491 aa12.82□□□□□ -0.36
GPATCH4-207ENST00000494414 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
GPATCH4-207ENST00000494414 SLIT1O75093 1534 aa12.82□□□□□ -0.36
GPATCH4-207ENST00000494414 PTPRTO14522 1441 aa12.81□□□□□ -0.36
GPATCH4-207ENST00000494414 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
GPATCH4-207ENST00000494414 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
GPATCH4-207ENST00000494414 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
GPATCH4-207ENST00000494414 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
GPATCH4-207ENST00000494414 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
GPATCH4-207ENST00000494414 ESF1Q9H501 851 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms