RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	FBXO41	Q8TF61	875 aa		29.18	■■■□□ 2.26
ABCA2-222	ENST00000494046	MYO3A	Q8NEV4	1616 aa		29.17	■■■□□ 2.26
ABCA2-222	ENST00000494046	CAMSAP1	Q5T5Y3	1602 aa		29.15	■■■□□ 2.26
ABCA2-222	ENST00000494046	NCOA1	Q15788	1441 aa		29.15	■■■□□ 2.26
ABCA2-222	ENST00000494046	TCOF1	Q13428	1488 aa	Known RBP	29.14	■■■□□ 2.26
ABCA2-222	ENST00000494046	DAPK1	P53355	1430 aa		29.14	■■■□□ 2.26
ABCA2-222	ENST00000494046	RRP7BP	Q9NSQ0	103 aa		29.14	■■■□□ 2.26
ABCA2-222	ENST00000494046	CHIC2	Q9UKJ5	165 aa		29.12	■■■□□ 2.25
ABCA2-222	ENST00000494046	KIF15	Q9NS87	1388 aa		29.12	■■■□□ 2.25
ABCA2-222	ENST00000494046	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.12	■■■□□ 2.25
ABCA2-222	ENST00000494046	CROCC2	H7BZ55	1655 aa		29.12	■■■□□ 2.25
ABCA2-222	ENST00000494046	SHANK2	Q9UPX8	1470 aa		29.11	■■■□□ 2.25
ABCA2-222	ENST00000494046	CERK	Q8TCT0	537 aa		29.11	■■■□□ 2.25
ABCA2-222	ENST00000494046	DUOX2	Q9NRD8	1548 aa		29.11	■■■□□ 2.25
ABCA2-222	ENST00000494046	FAM135A	Q9P2D6	1515 aa		29.11	■■■□□ 2.25
ABCA2-222	ENST00000494046	NCKAP5L	Q9HCH0	1330 aa		29.11	■■■□□ 2.25
ABCA2-222	ENST00000494046	PZP	P20742	1482 aa		29.1	■■■□□ 2.25
ABCA2-222	ENST00000494046	RNF17	Q9BXT8	1623 aa	Known RBP	29.1	■■■□□ 2.25
ABCA2-222	ENST00000494046	DNMT1	P26358	1616 aa	Known RBP	29.09	■■■□□ 2.25
ABCA2-222	ENST00000494046	PTPRT	O14522	1441 aa		29.09	■■■□□ 2.25
ABCA2-222	ENST00000494046	ZNF142	P52746	1687 aa	Predicted RBP	29.09	■■■□□ 2.25
ABCA2-222	ENST00000494046	TNR	Q92752	1358 aa		29.09	■■■□□ 2.25
ABCA2-222	ENST00000494046	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.08	■■■□□ 2.25
ABCA2-222	ENST00000494046	FAM50A	Q14320	339 aa	Known RBP	29.07	■■■□□ 2.24
ABCA2-222	ENST00000494046	ABCC3	O15438	1527 aa		29.05	■■■□□ 2.24
ABCA2-222	ENST00000494046	MROH1	Q8NDA8	1641 aa		29.05	■■■□□ 2.24
ABCA2-222	ENST00000494046	A2ML1	A8K2U0	1454 aa		29.04	■■■□□ 2.24
ABCA2-222	ENST00000494046	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.01	■■■□□ 2.23
ABCA2-222	ENST00000494046	ERBIN	Q96RT1	1412 aa		29	■■■□□ 2.23
ABCA2-222	ENST00000494046	ANKRD30A	Q9BXX3	1397 aa		29	■■■□□ 2.23
ABCA2-222	ENST00000494046	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	29	■■■□□ 2.23
ABCA2-222	ENST00000494046	PLA2R1	Q13018	1463 aa		28.99	■■■□□ 2.23
ABCA2-222	ENST00000494046	ZC3H13	Q5T200	1668 aa	Known RBP	28.98	■■■□□ 2.23
ABCA2-222	ENST00000494046	PKD2	Q13563	968 aa		28.98	■■■□□ 2.23
ABCA2-222	ENST00000494046	CEP152	O94986	1710 aa		28.97	■■■□□ 2.23
ABCA2-222	ENST00000494046	PRDM15	P57071	1507 aa	Predicted RBP	28.92	■■■□□ 2.22
ABCA2-222	ENST00000494046	NLRP1	Q9C000	1473 aa		28.91	■■■□□ 2.22
ABCA2-222	ENST00000494046	ERVK-7	P63135	1459 aa		28.91	■■■□□ 2.22
ABCA2-222	ENST00000494046	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.91	■■■□□ 2.22
ABCA2-222	ENST00000494046	SPATA31D1	Q6ZQQ2	1576 aa		28.9	■■■□□ 2.22
ABCA2-222	ENST00000494046	LTBP4	Q8N2S1	1624 aa		28.89	■■■□□ 2.22
ABCA2-222	ENST00000494046	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.89	■■■□□ 2.21
ABCA2-222	ENST00000494046	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.88	■■■□□ 2.21
ABCA2-222	ENST00000494046	UGGT1	Q9NYU2	1555 aa		28.88	■■■□□ 2.21
ABCA2-222	ENST00000494046	ADGRL2	O95490	1459 aa		28.88	■■■□□ 2.21
ABCA2-222	ENST00000494046	CFAP65	Q6ZU64	1925 aa	Known RBP	28.87	■■■□□ 2.21
ABCA2-222	ENST00000494046	DEPDC5	O75140	1603 aa		28.87	■■■□□ 2.21
ABCA2-222	ENST00000494046	KANK1	Q14678	1352 aa		28.86	■■■□□ 2.21
ABCA2-222	ENST00000494046	ANKLE2	Q86XL3	938 aa		28.83	■■■□□ 2.21
ABCA2-222	ENST00000494046	ARHGAP31	Q2M1Z3	1444 aa		28.82	■■■□□ 2.2
ABCA2-222	ENST00000494046	NEURL4	Q96JN8	1562 aa		28.8	■■■□□ 2.2
ABCA2-222	ENST00000494046	ANKRD50	Q9ULJ7	1429 aa		28.8	■■■□□ 2.2
ABCA2-222	ENST00000494046	ITGAE	P38570	1179 aa		28.8	■■■□□ 2.2
ABCA2-222	ENST00000494046	POLR1A	O95602	1720 aa	Predicted RBP	28.79	■■■□□ 2.2
ABCA2-222	ENST00000494046	VWDE	Q8N2E2	1590 aa		28.77	■■■□□ 2.2
ABCA2-222	ENST00000494046	LMTK2	Q8IWU2	1503 aa		28.75	■■■□□ 2.19
ABCA2-222	ENST00000494046	NPHP4	O75161	1426 aa	Predicted RBP	28.71	■■■□□ 2.19
ABCA2-222	ENST00000494046	UBR1	Q8IWV7	1749 aa		28.71	■■■□□ 2.19
ABCA2-222	ENST00000494046	MED14	O60244	1454 aa		28.68	■■■□□ 2.18
ABCA2-222	ENST00000494046	IQSEC2	Q5JU85	1478 aa		28.68	■■■□□ 2.18
ABCA2-222	ENST00000494046	EFCAB6	Q5THR3	1501 aa		28.68	■■■□□ 2.18
ABCA2-222	ENST00000494046	ROCK1	Q13464	1354 aa		28.67	■■■□□ 2.18
ABCA2-222	ENST00000494046	STAG3	Q9UJ98	1225 aa		28.66	■■■□□ 2.18
ABCA2-222	ENST00000494046	IDI1	Q13907	227 aa		28.65	■■■□□ 2.18
ABCA2-222	ENST00000494046	PIK3C2B	O00750	1634 aa		28.65	■■■□□ 2.18
ABCA2-222	ENST00000494046	LTK	P29376	864 aa		28.64	■■■□□ 2.18
ABCA2-222	ENST00000494046	SYNM	O15061	1565 aa		28.63	■■■□□ 2.17
ABCA2-222	ENST00000494046	IQGAP1	P46940	1657 aa		28.63	■■■□□ 2.17
ABCA2-222	ENST00000494046	TXNDC2	Q86VQ3	553 aa		28.62	■■■□□ 2.17
ABCA2-222	ENST00000494046	NOS1	P29475	1434 aa		28.61	■■■□□ 2.17
ABCA2-222	ENST00000494046	SCAF11	Q99590	1463 aa	Known RBP	28.61	■■■□□ 2.17
ABCA2-222	ENST00000494046	UBAP1L	F5GYI3	381 aa		28.61	■■■□□ 2.17
ABCA2-222	ENST00000494046	ARHGAP23	Q9P227	1491 aa		28.59	■■■□□ 2.17
ABCA2-222	ENST00000494046	UNC13B	O14795	1591 aa		28.59	■■■□□ 2.17
ABCA2-222	ENST00000494046	SLIT1	O75093	1534 aa		28.59	■■■□□ 2.17
ABCA2-222	ENST00000494046	EID1	Q9Y6B2	187 aa		28.58	■■■□□ 2.17
ABCA2-222	ENST00000494046	TMEM2	Q9UHN6	1383 aa		28.57	■■■□□ 2.16
ABCA2-222	ENST00000494046	TET3	O43151	1660 aa		28.56	■■■□□ 2.16
ABCA2-222	ENST00000494046	CPS1	P31327	1500 aa		28.56	■■■□□ 2.16
ABCA2-222	ENST00000494046	RRBP1	Q9P2E9	1410 aa	Known RBP	28.55	■■■□□ 2.16
ABCA2-222	ENST00000494046	RPRD2	Q5VT52	1461 aa	Known RBP	28.55	■■■□□ 2.16
ABCA2-222	ENST00000494046	SLC52A1	Q9NWF4	448 aa		28.54	■■■□□ 2.16
ABCA2-222	ENST00000494046	NUP155	O75694	1391 aa		28.53	■■■□□ 2.16
ABCA2-222	ENST00000494046	GCC2	Q8IWJ2	1684 aa		28.49	■■■□□ 2.15
ABCA2-222	ENST00000494046	ADGRB3	O60242	1522 aa		28.49	■■■□□ 2.15
ABCA2-222	ENST00000494046	KDM5A	P29375	1690 aa	Known RBP	28.48	■■■□□ 2.15
ABCA2-222	ENST00000494046	IQGAP3	Q86VI3	1631 aa		28.48	■■■□□ 2.15
ABCA2-222	ENST00000494046	STRCP1	A6NGW2	1772 aa		28.47	■■■□□ 2.15
ABCA2-222	ENST00000494046		E9PCH4	1651 aa		28.46	■■■□□ 2.15
ABCA2-222	ENST00000494046	SENP3	Q9H4L4	574 aa	Predicted RBP	28.45	■■■□□ 2.14
ABCA2-222	ENST00000494046	PIP4K2B	P78356	416 aa		28.44	■■■□□ 2.14
ABCA2-222	ENST00000494046	SCAF1	Q9H7N4	1312 aa	Known RBP	28.44	■■■□□ 2.14
ABCA2-222	ENST00000494046	CHGA	P10645	457 aa	Known RBP	28.43	■■■□□ 2.14
ABCA2-222	ENST00000494046	LRRC7	Q96NW7	1537 aa		28.41	■■■□□ 2.14
ABCA2-222	ENST00000494046	SLC26A8	Q96RN1	970 aa		28.41	■■■□□ 2.14
ABCA2-222	ENST00000494046	TOM1	O60784	492 aa		28.4	■■■□□ 2.14
ABCA2-222	ENST00000494046	BCAN	Q96GW7	911 aa		28.4	■■■□□ 2.14
ABCA2-222	ENST00000494046	NAIP	Q13075	1403 aa		28.38	■■■□□ 2.13
ABCA2-222	ENST00000494046	MYO5B	Q9ULV0	1848 aa		28.37	■■■□□ 2.13
ABCA2-222	ENST00000494046	TMEM131L	A2VDJ0	1609 aa		28.36	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms