RNA–Protein interactions for RNA: ENST00000492519.1

PABPC4-217, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-217ENST00000492519 IRF6O14896 467 aa6.93□□□□□ -1.3
PABPC4-217ENST00000492519 HIC1Q14526 733 aa6.93□□□□□ -1.3
PABPC4-217ENST00000492519 POTEBQ6S5H4 581 aa6.93□□□□□ -1.3
PABPC4-217ENST00000492519 FOSBP53539 338 aa6.92□□□□□ -1.3
PABPC4-217ENST00000492519 PTGDRQ13258 359 aa6.92□□□□□ -1.3
PABPC4-217ENST00000492519 PCDHGA10Q9Y5H3 936 aa6.92□□□□□ -1.3
PABPC4-217ENST00000492519 PHF14O94880 888 aa6.91□□□□□ -1.3
PABPC4-217ENST00000492519 EMP3P54852 163 aa6.91□□□□□ -1.3
PABPC4-217ENST00000492519 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
PABPC4-217ENST00000492519 JPH4Q96JJ6 628 aa6.91□□□□□ -1.3
PABPC4-217ENST00000492519 CDHR5Q9HBB8 845 aa6.91□□□□□ -1.3
PABPC4-217ENST00000492519 EN1Q05925 392 aaPredicted RBP6.9□□□□□ -1.3
PABPC4-217ENST00000492519 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
PABPC4-217ENST00000492519 EPAS1Q99814 870 aa6.9□□□□□ -1.3
PABPC4-217ENST00000492519 FAM205CA6NFA0 338 aa6.89□□□□□ -1.31
PABPC4-217ENST00000492519 MAP3K7O43318 606 aa6.89□□□□□ -1.31
PABPC4-217ENST00000492519 VARS2Q5ST30 1063 aaKnown RBP6.89□□□□□ -1.31
PABPC4-217ENST00000492519 ZNF454Q8N9F8 522 aa6.89□□□□□ -1.31
PABPC4-217ENST00000492519 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
PABPC4-217ENST00000492519 ERBB3P21860 1342 aa6.89□□□□□ -1.31
PABPC4-217ENST00000492519 AMHR2Q16671 573 aa6.88□□□□□ -1.31
PABPC4-217ENST00000492519 TSR1Q2NL82 804 aaKnown RBP6.88□□□□□ -1.31
PABPC4-217ENST00000492519 HS3ST6Q96QI5 342 aa6.88□□□□□ -1.31
PABPC4-217ENST00000492519 PSDA5PKW4 1024 aaPredicted RBP6.87□□□□□ -1.31
PABPC4-217ENST00000492519 TYW1BQ6NUM6 668 aa6.87□□□□□ -1.31
PABPC4-217ENST00000492519 POTEEQ6S8J3 1075 aa6.87□□□□□ -1.31
PABPC4-217ENST00000492519 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
PABPC4-217ENST00000492519 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
PABPC4-217ENST00000492519 FAM117AQ9C073 453 aa6.87□□□□□ -1.31
PABPC4-217ENST00000492519 ERICH6Q7L0X2 663 aa6.86□□□□□ -1.31
PABPC4-217ENST00000492519 ZDHHC16Q969W1 377 aa6.86□□□□□ -1.31
PABPC4-217ENST00000492519 ADAM33Q9BZ11 813 aa6.86□□□□□ -1.31
PABPC4-217ENST00000492519 PPP4R3BQ5MIZ7 849 aa6.85□□□□□ -1.31
PABPC4-217ENST00000492519 POTEGQ6S5H5 508 aa6.85□□□□□ -1.31
PABPC4-217ENST00000492519 ZNF687Q8N1G0 1237 aa6.85□□□□□ -1.31
PABPC4-217ENST00000492519 FBXW7Q969H0 707 aa6.85□□□□□ -1.31
PABPC4-217ENST00000492519 DAXXQ9UER7 740 aaPredicted RBP6.85□□□□□ -1.31
PABPC4-217ENST00000492519 POTEMA6NI47 508 aa6.84□□□□□ -1.31
PABPC4-217ENST00000492519 BCL2L12Q9HB09 334 aa6.84□□□□□ -1.31
PABPC4-217ENST00000492519 PLEKHG3A1L390 1219 aa6.83□□□□□ -1.32
PABPC4-217ENST00000492519 TTLL12Q14166 644 aaPredicted RBP6.83□□□□□ -1.32
PABPC4-217ENST00000492519 C6orf132Q5T0Z8 1188 aa6.83□□□□□ -1.32
PABPC4-217ENST00000492519 REPIN1Q9BWE0 567 aaKnown RBP6.82□□□□□ -1.32
PABPC4-217ENST00000492519 FAM161AQ3B820 660 aa6.81□□□□□ -1.32
PABPC4-217ENST00000492519 GIGYF2Q6Y7W6 1299 aaKnown RBP6.81□□□□□ -1.32
PABPC4-217ENST00000492519 DDRGK1Q96HY6 314 aa6.81□□□□□ -1.32
PABPC4-217ENST00000492519 PHOX2BQ99453 314 aa6.81□□□□□ -1.32
PABPC4-217ENST00000492519 MS4A1P11836 297 aa6.8□□□□□ -1.32
PABPC4-217ENST00000492519 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
PABPC4-217ENST00000492519 ARHGAP33O14559 1287 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 COL9A1P20849 921 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 PBX2P40425 430 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 PSEN2P49810 448 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 TMUB1Q9BVT8 246 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 AXIN2Q9Y2T1 843 aa6.79□□□□□ -1.32
PABPC4-217ENST00000492519 PTPREP23469 700 aa6.78□□□□□ -1.32
PABPC4-217ENST00000492519 MDM2Q00987 491 aaPredicted RBP6.78□□□□□ -1.32
PABPC4-217ENST00000492519 KCNK17Q96T54 332 aa6.78□□□□□ -1.32
PABPC4-217ENST00000492519 DMRTA1Q5VZB9 504 aa6.77□□□□□ -1.33
PABPC4-217ENST00000492519 CDAN1Q8IWY9 1227 aa6.77□□□□□ -1.33
PABPC4-217ENST00000492519 CERKQ8TCT0 537 aa6.77□□□□□ -1.33
PABPC4-217ENST00000492519 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
PABPC4-217ENST00000492519 CLCN1P35523 988 aa6.76□□□□□ -1.33
PABPC4-217ENST00000492519 METTL3Q86U44 580 aaKnown RBP6.76□□□□□ -1.33
PABPC4-217ENST00000492519 NLRP7Q8WX94 980 aa6.76□□□□□ -1.33
PABPC4-217ENST00000492519 GPCPD1Q9NPB8 672 aa6.76□□□□□ -1.33
PABPC4-217ENST00000492519 ADGRG1Q9Y653 693 aa6.76□□□□□ -1.33
PABPC4-217ENST00000492519 TTC13Q8NBP0 860 aa6.75□□□□□ -1.33
PABPC4-217ENST00000492519 PXYLP1Q8TE99 480 aa6.75□□□□□ -1.33
PABPC4-217ENST00000492519 ZBED2Q9BTP6 218 aa6.75□□□□□ -1.33
PABPC4-217ENST00000492519 OATP04181 439 aa6.74□□□□□ -1.33
PABPC4-217ENST00000492519 SSTR3P32745 418 aaPredicted RBP6.74□□□□□ -1.33
PABPC4-217ENST00000492519 PRSS12P56730 875 aa6.74□□□□□ -1.33
PABPC4-217ENST00000492519 SLC4A5Q9BY07 1137 aa6.74□□□□□ -1.33
PABPC4-217ENST00000492519 RBM27Q9P2N5 1060 aaKnown RBP6.74□□□□□ -1.33
PABPC4-217ENST00000492519 FAM198AQ9UFP1 575 aa6.74□□□□□ -1.33
PABPC4-217ENST00000492519 LSM11P83369 360 aaKnown RBP eCLIP6.73□□□□□ -1.33
PABPC4-217ENST00000492519 CDCA7LQ96GN5 454 aa6.73□□□□□ -1.33
PABPC4-217ENST00000492519 PROX2Q3B8N5 592 aa6.72□□□□□ -1.33
PABPC4-217ENST00000492519 GOPCQ9HD26 462 aa6.72□□□□□ -1.33
PABPC4-217ENST00000492519 FAM217BQ9NTX9 383 aaPredicted RBP6.72□□□□□ -1.33
PABPC4-217ENST00000492519 VPS9D1Q9Y2B5 631 aa6.72□□□□□ -1.33
PABPC4-217ENST00000492519 TK2O00142 265 aa6.71□□□□□ -1.34
PABPC4-217ENST00000492519 TSKSQ9UJT2 592 aa6.71□□□□□ -1.34
PABPC4-217ENST00000492519 TRIM6-TRIM34B2RNG4 842 aa6.7□□□□□ -1.34
PABPC4-217ENST00000492519 C3orf80F5H4A9 247 aa6.7□□□□□ -1.34
PABPC4-217ENST00000492519 ONECUT3O60422 494 aaPredicted RBP6.7□□□□□ -1.34
PABPC4-217ENST00000492519 RBM46Q8TBY0 533 aaKnown RBP6.7□□□□□ -1.34
PABPC4-217ENST00000492519 KCNH8Q96L42 1107 aa6.7□□□□□ -1.34
PABPC4-217ENST00000492519 BEGAINQ9BUH8 593 aa6.7□□□□□ -1.34
PABPC4-217ENST00000492519 PCDH10Q9P2E7 1040 aa6.7□□□□□ -1.34
PABPC4-217ENST00000492519 BHMG1C9JSJ3 638 aaPredicted RBP6.69□□□□□ -1.34
PABPC4-217ENST00000492519 SUPT5HO00267 1087 aaKnown RBP6.69□□□□□ -1.34
PABPC4-217ENST00000492519 HRO43593 1189 aa6.69□□□□□ -1.34
PABPC4-217ENST00000492519 SH3D19Q5HYK7 790 aa6.69□□□□□ -1.34
PABPC4-217ENST00000492519 ADGRD1Q6QNK2 874 aa6.69□□□□□ -1.34
PABPC4-217ENST00000492519 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
PABPC4-217ENST00000492519 ANKRD13DQ6ZTN6 518 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms