RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
VPS8-225ENST00000492449 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
VPS8-225ENST00000492449 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
VPS8-225ENST00000492449 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
VPS8-225ENST00000492449 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
VPS8-225ENST00000492449 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
VPS8-225ENST00000492449 SCAPERQ9BY12 1400 aa12.42□□□□□ -0.42
VPS8-225ENST00000492449 PLIN1O60240 522 aa12.42□□□□□ -0.42
VPS8-225ENST00000492449 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
VPS8-225ENST00000492449 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
VPS8-225ENST00000492449 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
VPS8-225ENST00000492449 DMTNQ08495 405 aa12.41□□□□□ -0.42
VPS8-225ENST00000492449 IGF1RP08069 1367 aa12.4□□□□□ -0.42
VPS8-225ENST00000492449 TRAK2O60296 914 aa12.4□□□□□ -0.42
VPS8-225ENST00000492449 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
VPS8-225ENST00000492449 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.43
VPS8-225ENST00000492449 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
VPS8-225ENST00000492449 USP47Q96K76 1375 aa12.39□□□□□ -0.43
VPS8-225ENST00000492449 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
VPS8-225ENST00000492449 MPHOSPH9Q99550 1183 aa12.39□□□□□ -0.43
VPS8-225ENST00000492449 UGGT2Q9NYU1 1516 aa12.38□□□□□ -0.43
VPS8-225ENST00000492449 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
VPS8-225ENST00000492449 EHBP1L1Q8N3D4 1523 aa12.38□□□□□ -0.43
VPS8-225ENST00000492449 PARD3Q8TEW0 1356 aa12.38□□□□□ -0.43
VPS8-225ENST00000492449 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
VPS8-225ENST00000492449 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
VPS8-225ENST00000492449 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
VPS8-225ENST00000492449 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
VPS8-225ENST00000492449 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
VPS8-225ENST00000492449 STAC3Q96MF2 364 aa12.37□□□□□ -0.43
VPS8-225ENST00000492449 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
VPS8-225ENST00000492449 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
VPS8-225ENST00000492449 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
VPS8-225ENST00000492449 MAPK8IP3Q9UPT6 1336 aa12.35□□□□□ -0.43
VPS8-225ENST00000492449 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
VPS8-225ENST00000492449 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
VPS8-225ENST00000492449 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 DYNC1I1O14576 645 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 TBC1D32Q96NH3 1257 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 ARXQ96QS3 562 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
VPS8-225ENST00000492449 CARMIL1Q5VZK9 1371 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
VPS8-225ENST00000492449 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
VPS8-225ENST00000492449 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
VPS8-225ENST00000492449 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 FHOD3Q2V2M9 1422 aa12.34□□□□□ -0.43
VPS8-225ENST00000492449 KIF20AO95235 890 aa12.33□□□□□ -0.44
VPS8-225ENST00000492449 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
VPS8-225ENST00000492449 RALGAPBQ86X10 1494 aa12.33□□□□□ -0.44
VPS8-225ENST00000492449 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
VPS8-225ENST00000492449 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
VPS8-225ENST00000492449 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
VPS8-225ENST00000492449 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
VPS8-225ENST00000492449 SEC24BO95487 1268 aa12.32□□□□□ -0.44
VPS8-225ENST00000492449 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.32□□□□□ -0.44
VPS8-225ENST00000492449 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
VPS8-225ENST00000492449 ZNF500O60304 480 aaPredicted RBP12.31□□□□□ -0.44
VPS8-225ENST00000492449 CCDC94Q9BW85 323 aaPredicted RBP12.31□□□□□ -0.44
VPS8-225ENST00000492449 FAM13BQ9NYF5 915 aa12.31□□□□□ -0.44
VPS8-225ENST00000492449 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
VPS8-225ENST00000492449 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
VPS8-225ENST00000492449 PTMSP20962 102 aa12.3□□□□□ -0.44
VPS8-225ENST00000492449 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
VPS8-225ENST00000492449 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
VPS8-225ENST00000492449 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
VPS8-225ENST00000492449 CFTRP13569 1480 aa12.29□□□□□ -0.44
VPS8-225ENST00000492449 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
VPS8-225ENST00000492449 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
VPS8-225ENST00000492449 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
VPS8-225ENST00000492449 SKOR2Q2VWA4 1001 aaPredicted RBP12.28□□□□□ -0.44
VPS8-225ENST00000492449 GAS2L3Q86XJ1 694 aa12.28□□□□□ -0.44
VPS8-225ENST00000492449 GRIN2BQ13224 1484 aa12.28□□□□□ -0.44
VPS8-225ENST00000492449 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
VPS8-225ENST00000492449 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
VPS8-225ENST00000492449 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
VPS8-225ENST00000492449 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.44
VPS8-225ENST00000492449 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.44
VPS8-225ENST00000492449 UQCRHP07919 91 aa12.27□□□□□ -0.44
VPS8-225ENST00000492449 DDIT3P35638 169 aa12.27□□□□□ -0.44
VPS8-225ENST00000492449 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.44
VPS8-225ENST00000492449 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
VPS8-225ENST00000492449 TMEM51Q9NW97 253 aa12.27□□□□□ -0.45
VPS8-225ENST00000492449 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
VPS8-225ENST00000492449 TAF3Q5VWG9 929 aa12.26□□□□□ -0.45
VPS8-225ENST00000492449 DUSP27Q5VZP5 1158 aa12.26□□□□□ -0.45
VPS8-225ENST00000492449 RRP7BPQ9NSQ0 103 aa12.26□□□□□ -0.45
VPS8-225ENST00000492449 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
VPS8-225ENST00000492449 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
VPS8-225ENST00000492449 NOL7Q9UMY1 257 aaKnown RBP12.26□□□□□ -0.45
VPS8-225ENST00000492449 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
VPS8-225ENST00000492449 ARHGAP31Q2M1Z3 1444 aa12.25□□□□□ -0.45
VPS8-225ENST00000492449 ARHGEF12Q9NZN5 1544 aa12.25□□□□□ -0.45
VPS8-225ENST00000492449 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
VPS8-225ENST00000492449 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
VPS8-225ENST00000492449 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
VPS8-225ENST00000492449 MCM5P33992 734 aa12.24□□□□□ -0.45
VPS8-225ENST00000492449 SHROOM2Q13796 1616 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms