RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 ABCA6Q8N139 1617 aa18.88■□□□□ 0.61
LSS-210ENST00000491729 NUP155O75694 1391 aa18.88■□□□□ 0.61
LSS-210ENST00000491729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.614e-9■□□□□ 9.5
LSS-210ENST00000491729 DHX29Q7Z478 1369 aaKnown RBP18.87■□□□□ 0.61
LSS-210ENST00000491729 HECW2Q9P2P5 1572 aa18.87■□□□□ 0.61
LSS-210ENST00000491729 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
LSS-210ENST00000491729 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
LSS-210ENST00000491729 KIF3BO15066 747 aa18.85■□□□□ 0.61
LSS-210ENST00000491729 ERBINQ96RT1 1412 aa18.84■□□□□ 0.61
LSS-210ENST00000491729 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.61
LSS-210ENST00000491729 A2MP01023 1474 aa18.83■□□□□ 0.6
LSS-210ENST00000491729 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
LSS-210ENST00000491729 PKD2Q13563 968 aa18.81■□□□□ 0.6
LSS-210ENST00000491729 ZMYM4Q5VZL5 1548 aa18.81■□□□□ 0.6
LSS-210ENST00000491729 SIGLEC1Q9BZZ2 1709 aa18.79■□□□□ 0.6
LSS-210ENST00000491729 UNC13BO14795 1591 aa18.79■□□□□ 0.6
LSS-210ENST00000491729 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
LSS-210ENST00000491729 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
LSS-210ENST00000491729 FAM135AQ9P2D6 1515 aa18.78■□□□□ 0.6
LSS-210ENST00000491729 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.6
LSS-210ENST00000491729 ANKRD30BQ9BXX2 1392 aa18.77■□□□□ 0.6
LSS-210ENST00000491729 GGT6Q6P531 493 aa18.76■□□□□ 0.59
LSS-210ENST00000491729 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
LSS-210ENST00000491729 ATP10AO60312 1499 aa18.73■□□□□ 0.59
LSS-210ENST00000491729 IQGAP3Q86VI3 1631 aa18.72■□□□□ 0.59
LSS-210ENST00000491729 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
LSS-210ENST00000491729 VWDEQ8N2E2 1590 aa18.7■□□□□ 0.58
LSS-210ENST00000491729 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
LSS-210ENST00000491729 PRDM15P57071 1507 aaPredicted RBP18.68■□□□□ 0.58
LSS-210ENST00000491729 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
LSS-210ENST00000491729 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
LSS-210ENST00000491729 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
LSS-210ENST00000491729 MLECQ14165 292 aa18.65■□□□□ 0.58
LSS-210ENST00000491729 E9PCH4 1651 aa18.64■□□□□ 0.58
LSS-210ENST00000491729 TONSLQ96HA7 1378 aa18.63■□□□□ 0.57
LSS-210ENST00000491729 CEP152O94986 1710 aa18.63■□□□□ 0.57
LSS-210ENST00000491729 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
LSS-210ENST00000491729 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
LSS-210ENST00000491729 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
LSS-210ENST00000491729 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
LSS-210ENST00000491729 ABCC3O15438 1527 aa18.6■□□□□ 0.57
LSS-210ENST00000491729 L3MBTL2Q969R5 705 aa18.6■□□□□ 0.57
LSS-210ENST00000491729 KANK1Q14678 1352 aa18.6■□□□□ 0.57
LSS-210ENST00000491729 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
LSS-210ENST00000491729 AGLP35573 1532 aa18.6■□□□□ 0.57
LSS-210ENST00000491729 TET3O43151 1660 aa18.59■□□□□ 0.57
LSS-210ENST00000491729 NPATQ14207 1427 aa18.58■□□□□ 0.56
LSS-210ENST00000491729 LMTK2Q8IWU2 1503 aa18.58■□□□□ 0.56
LSS-210ENST00000491729 EFCAB6Q5THR3 1501 aa18.56■□□□□ 0.56
LSS-210ENST00000491729 ARID4BQ4LE39 1312 aaPredicted RBP18.56■□□□□ 0.56
LSS-210ENST00000491729 PTPRTO14522 1441 aa18.55■□□□□ 0.56
LSS-210ENST00000491729 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
LSS-210ENST00000491729 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
LSS-210ENST00000491729 CAMSAP1Q5T5Y3 1602 aa18.51■□□□□ 0.55
LSS-210ENST00000491729 RGL3Q3MIN7 710 aa18.51■□□□□ 0.55
LSS-210ENST00000491729 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
LSS-210ENST00000491729 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
LSS-210ENST00000491729 SPHKAPQ2M3C7 1700 aa18.49■□□□□ 0.55
LSS-210ENST00000491729 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
LSS-210ENST00000491729 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
LSS-210ENST00000491729 TRPM2O94759 1503 aa18.48■□□□□ 0.55
LSS-210ENST00000491729 NOS1P29475 1434 aa18.46■□□□□ 0.55
LSS-210ENST00000491729 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
LSS-210ENST00000491729 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
LSS-210ENST00000491729 KDM2AQ9Y2K7 1162 aa18.45■□□□□ 0.54
LSS-210ENST00000491729 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
LSS-210ENST00000491729 SYNMO15061 1565 aa18.44■□□□□ 0.54
LSS-210ENST00000491729 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
LSS-210ENST00000491729 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
LSS-210ENST00000491729 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
LSS-210ENST00000491729 ZC3H13Q5T200 1668 aaKnown RBP18.43■□□□□ 0.54
LSS-210ENST00000491729 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
LSS-210ENST00000491729 CCER2I3L3R5 266 aa18.43■□□□□ 0.54
LSS-210ENST00000491729 IDI1Q13907 227 aa18.43■□□□□ 0.54
LSS-210ENST00000491729 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
LSS-210ENST00000491729 PREX1Q8TCU6 1659 aa18.39■□□□□ 0.53
LSS-210ENST00000491729 ANP32CO43423 234 aa18.38■□□□□ 0.53
LSS-210ENST00000491729 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
LSS-210ENST00000491729 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
LSS-210ENST00000491729 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
LSS-210ENST00000491729 POLR1AO95602 1720 aaPredicted RBP18.38■□□□□ 0.53
LSS-210ENST00000491729 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
LSS-210ENST00000491729 MROH2AA6NES4 1674 aa18.36■□□□□ 0.53
LSS-210ENST00000491729 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
LSS-210ENST00000491729 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
LSS-210ENST00000491729 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
LSS-210ENST00000491729 NUTM2DQ5VT03 806 aaPredicted RBP18.33■□□□□ 0.52
LSS-210ENST00000491729 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
LSS-210ENST00000491729 SUPT16HQ9Y5B9 1047 aaKnown RBP18.32■□□□□ 0.52
LSS-210ENST00000491729 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
LSS-210ENST00000491729 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
LSS-210ENST00000491729 ADGRB3O60242 1522 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 KIF1BO60333 1816 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 SLC52A1Q9NWF4 448 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
LSS-210ENST00000491729 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms