RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
RTN4-215ENST00000491592 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.24□□□□□ -0.93
RTN4-215ENST00000491592 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
RTN4-215ENST00000491592 EVI5O60447 810 aa9.23□□□□□ -0.93
RTN4-215ENST00000491592 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
RTN4-215ENST00000491592 PRKCSHP14314 528 aaPredicted RBP9.22□□□□□ -0.93
RTN4-215ENST00000491592 ZNF454Q8N9F8 522 aa9.22□□□□□ -0.93
RTN4-215ENST00000491592 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
RTN4-215ENST00000491592 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
RTN4-215ENST00000491592 BCL2L12Q9HB09 334 aa9.2□□□□□ -0.94
RTN4-215ENST00000491592 VPS9D1Q9Y2B5 631 aa9.19□□□□□ -0.94
RTN4-215ENST00000491592 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
RTN4-215ENST00000491592 PTPREP23469 700 aa9.18□□□□□ -0.94
RTN4-215ENST00000491592 DDX12PQ92771 950 aa9.18□□□□□ -0.94
RTN4-215ENST00000491592 FOSBP53539 338 aa9.17□□□□□ -0.94
RTN4-215ENST00000491592 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
RTN4-215ENST00000491592 RBM26Q5T8P6 1007 aaKnown RBP9.16□□□□□ -0.94
RTN4-215ENST00000491592 JPH4Q96JJ6 628 aa9.15□□□□□ -0.94
RTN4-215ENST00000491592 GPIHBP1Q8IV16 184 aa9.14□□□□□ -0.95
RTN4-215ENST00000491592 ZDHHC16Q969W1 377 aa9.13□□□□□ -0.95
RTN4-215ENST00000491592 GOLGA8CPA6NN73 597 aa9.12□□□□□ -0.95
RTN4-215ENST00000491592 OSBPP22059 807 aa9.12□□□□□ -0.95
RTN4-215ENST00000491592 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
RTN4-215ENST00000491592 PHF14O94880 888 aa9.11□□□□□ -0.95
RTN4-215ENST00000491592 PTPN5P54829 565 aa9.11□□□□□ -0.95
RTN4-215ENST00000491592 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
RTN4-215ENST00000491592 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
RTN4-215ENST00000491592 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
RTN4-215ENST00000491592 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
RTN4-215ENST00000491592 EPAS1Q99814 870 aa9.09□□□□□ -0.95
RTN4-215ENST00000491592 NBPF3Q9H094 633 aa9.09□□□□□ -0.95
RTN4-215ENST00000491592 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.95
RTN4-215ENST00000491592 GPR37O15354 613 aa9.08□□□□□ -0.96
RTN4-215ENST00000491592 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
RTN4-215ENST00000491592 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
RTN4-215ENST00000491592 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
RTN4-215ENST00000491592 THSD4Q6ZMP0 1018 aa9.07□□□□□ -0.96
RTN4-215ENST00000491592 WNT2BQ93097 391 aa9.07□□□□□ -0.96
RTN4-215ENST00000491592 ADAM33Q9BZ11 813 aa9.07□□□□□ -0.96
RTN4-215ENST00000491592 NUTM2FA1L443 756 aa9.06□□□□□ -0.96
RTN4-215ENST00000491592 MAP3K7O43318 606 aa9.06□□□□□ -0.96
RTN4-215ENST00000491592 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
RTN4-215ENST00000491592 ZMYND10O75800 440 aa9.04□□□□□ -0.96
RTN4-215ENST00000491592 RGS20O76081 388 aa9.04□□□□□ -0.96
RTN4-215ENST00000491592 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
RTN4-215ENST00000491592 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
RTN4-215ENST00000491592 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
RTN4-215ENST00000491592 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
RTN4-215ENST00000491592 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
RTN4-215ENST00000491592 BARGINQ6ZT62 677 aa9.01□□□□□ -0.97
RTN4-215ENST00000491592 FCHSD2O94868 740 aa9□□□□□ -0.97
RTN4-215ENST00000491592 PTGDRQ13258 359 aa9□□□□□ -0.97
RTN4-215ENST00000491592 HIC1Q14526 733 aa8.99□□□□□ -0.97
RTN4-215ENST00000491592 GNPATO15228 680 aa8.98□□□□□ -0.97
RTN4-215ENST00000491592 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
RTN4-215ENST00000491592 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
RTN4-215ENST00000491592 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
RTN4-215ENST00000491592 A0A0G2JS52 829 aa8.96□□□□□ -0.98
RTN4-215ENST00000491592 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
RTN4-215ENST00000491592 C6orf132Q5T0Z8 1188 aa8.96□□□□□ -0.98
RTN4-215ENST00000491592 COL9A1P20849 921 aa8.95□□□□□ -0.98
RTN4-215ENST00000491592 MAP2K5Q13163 448 aa8.95□□□□□ -0.98
RTN4-215ENST00000491592 PROX2Q3B8N5 592 aa8.95□□□□□ -0.98
RTN4-215ENST00000491592 NPDC1Q9NQX5 325 aaPredicted RBP8.95□□□□□ -0.98
RTN4-215ENST00000491592 FECHP22830 423 aa8.94□□□□□ -0.98
RTN4-215ENST00000491592 NYAP1Q6ZVC0 841 aa8.94□□□□□ -0.98
RTN4-215ENST00000491592 KRI1Q8N9T8 703 aaKnown RBP8.94□□□□□ -0.98
RTN4-215ENST00000491592 CERKQ8TCT0 537 aa8.94□□□□□ -0.98
RTN4-215ENST00000491592 KIAA1468Q9P260 1216 aa8.92□□□□□ -0.98
RTN4-215ENST00000491592 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
RTN4-215ENST00000491592 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
RTN4-215ENST00000491592 RBM27Q9P2N5 1060 aaKnown RBP8.91□□□□□ -0.98
RTN4-215ENST00000491592 MINK1Q8N4C8 1332 aaPredicted RBP8.9□□□□□ -0.98
RTN4-215ENST00000491592 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
RTN4-215ENST00000491592 PADI6Q6TGC4 694 aa8.9□□□□□ -0.98
RTN4-215ENST00000491592 ZFRQ96KR1 1074 aaKnown RBP8.9□□□□□ -0.98
RTN4-215ENST00000491592 AK7Q96M32 723 aa8.9□□□□□ -0.98
RTN4-215ENST00000491592 IRX2Q9BZI1 471 aaPredicted RBP8.9□□□□□ -0.98
RTN4-215ENST00000491592 IRF6O14896 467 aa8.88□□□□□ -0.99
RTN4-215ENST00000491592 BCAMP50895 628 aa8.88□□□□□ -0.99
RTN4-215ENST00000491592 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
RTN4-215ENST00000491592 TRIM66O15016 1216 aa8.86□□□□□ -0.99
RTN4-215ENST00000491592 PRSS12P56730 875 aa8.86□□□□□ -0.99
RTN4-215ENST00000491592 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
RTN4-215ENST00000491592 TTC13Q8NBP0 860 aa8.86□□□□□ -0.99
RTN4-215ENST00000491592 CDCA7LQ96GN5 454 aa8.86□□□□□ -0.99
RTN4-215ENST00000491592 DAXXQ9UER7 740 aaPredicted RBP8.86□□□□□ -0.99
RTN4-215ENST00000491592 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
RTN4-215ENST00000491592 KCNC4Q03721 635 aa8.84□□□□□ -0.99
RTN4-215ENST00000491592 SEPT9Q9UHD8 586 aaPredicted RBP8.84□□□□□ -0.99
RTN4-215ENST00000491592 NEUROD2Q15784 382 aa8.83□□□□□ -1
RTN4-215ENST00000491592 PACS2Q86VP3 889 aa8.83□□□□□ -1
RTN4-215ENST00000491592 LRCH3Q96II8 777 aa8.83□□□□□ -1
RTN4-215ENST00000491592 WBP1LQ9NX94 342 aa8.83□□□□□ -1
RTN4-215ENST00000491592 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
RTN4-215ENST00000491592 FAM198AQ9UFP1 575 aa8.83□□□□□ -1
RTN4-215ENST00000491592 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
RTN4-215ENST00000491592 PDE4DQ08499 809 aa8.82□□□□□ -1
RTN4-215ENST00000491592 AMHR2Q16671 573 aa8.82□□□□□ -1
RTN4-215ENST00000491592 FAM161AQ3B820 660 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms