RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 TNRQ92752 1358 aa22.14■■□□□ 1.14
CTDSP1-210ENST00000491064 HSPA1LP34931 641 aa22.14■■□□□ 1.13
CTDSP1-210ENST00000491064 EHBP1L1Q8N3D4 1523 aa22.14■■□□□ 1.13
CTDSP1-210ENST00000491064 MED1Q15648 1581 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-210ENST00000491064 FBXO31Q5XUX0 539 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-210ENST00000491064 SHANK2Q9UPX8 1470 aa22.13■■□□□ 1.13
CTDSP1-210ENST00000491064 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CTDSP1-210ENST00000491064 PZPP20742 1482 aa22.12■■□□□ 1.13
CTDSP1-210ENST00000491064 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
CTDSP1-210ENST00000491064 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
CTDSP1-210ENST00000491064 PIP4K2BP78356 416 aa22.11■■□□□ 1.13
CTDSP1-210ENST00000491064 KIF3BO15066 747 aa22.1■■□□□ 1.13
CTDSP1-210ENST00000491064 TOM1O60784 492 aa22.1■■□□□ 1.13
CTDSP1-210ENST00000491064 CEP162Q5TB80 1403 aa22.1■■□□□ 1.13
CTDSP1-210ENST00000491064 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
CTDSP1-210ENST00000491064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.128e-9■■■■■ 55.4
CTDSP1-210ENST00000491064 CCDC141Q6ZP82 1450 aa22.07■■□□□ 1.12
CTDSP1-210ENST00000491064 ANKLE2Q86XL3 938 aa22.05■■□□□ 1.12
CTDSP1-210ENST00000491064 WASHC2CQ9Y4E1 1318 aa22.05■■□□□ 1.12
CTDSP1-210ENST00000491064 NLRP1Q9C000 1473 aa22.04■■□□□ 1.12
CTDSP1-210ENST00000491064 DEPDC5O75140 1603 aa22.04■■□□□ 1.12
CTDSP1-210ENST00000491064 ALKQ9UM73 1620 aa22.04■■□□□ 1.12
CTDSP1-210ENST00000491064 MIA2Q96PC5 1412 aa22.04■■□□□ 1.12
CTDSP1-210ENST00000491064 MED14O60244 1454 aa22.03■■□□□ 1.12
CTDSP1-210ENST00000491064 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
CTDSP1-210ENST00000491064 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
CTDSP1-210ENST00000491064 UGGT1Q9NYU2 1555 aa22.03■■□□□ 1.12
CTDSP1-210ENST00000491064 NPHP4O75161 1426 aaPredicted RBP22.02■■□□□ 1.12
CTDSP1-210ENST00000491064 RSPH4AQ5TD94 716 aa22■■□□□ 1.11
CTDSP1-210ENST00000491064 IQGAP1P46940 1657 aa21.99■■□□□ 1.11
CTDSP1-210ENST00000491064 NCOA2Q15596 1464 aa21.99■■□□□ 1.11
CTDSP1-210ENST00000491064 STRCP1A6NGW2 1772 aa21.97■■□□□ 1.11
CTDSP1-210ENST00000491064 ARHGEF5Q12774 1597 aa21.97■■□□□ 1.11
CTDSP1-210ENST00000491064 RNF17Q9BXT8 1623 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-210ENST00000491064 ABCC3O15438 1527 aa21.93■■□□□ 1.1
CTDSP1-210ENST00000491064 ZC3H13Q5T200 1668 aaKnown RBP21.93■■□□□ 1.1
CTDSP1-210ENST00000491064 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
CTDSP1-210ENST00000491064 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
CTDSP1-210ENST00000491064 SYNMO15061 1565 aa21.91■■□□□ 1.1
CTDSP1-210ENST00000491064 TSPY4P0CV99 314 aa21.91■■□□□ 1.1
CTDSP1-210ENST00000491064 TSPY10P0CW01 314 aa21.91■■□□□ 1.1
CTDSP1-210ENST00000491064 ERVK-7P63135 1459 aa21.89■■□□□ 1.09
CTDSP1-210ENST00000491064 MAST1Q9Y2H9 1570 aa21.87■■□□□ 1.09
CTDSP1-210ENST00000491064 EIF2AK4Q9P2K8 1649 aaKnown RBP21.87■■□□□ 1.09
CTDSP1-210ENST00000491064 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
CTDSP1-210ENST00000491064 UBR1Q8IWV7 1749 aa21.86■■□□□ 1.09
CTDSP1-210ENST00000491064 MROH1Q8NDA8 1641 aa21.86■■□□□ 1.09
CTDSP1-210ENST00000491064 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
CTDSP1-210ENST00000491064 CEP152O94986 1710 aa21.84■■□□□ 1.09
CTDSP1-210ENST00000491064 SCAF11Q99590 1463 aaKnown RBP21.81■■□□□ 1.08
CTDSP1-210ENST00000491064 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
CTDSP1-210ENST00000491064 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
CTDSP1-210ENST00000491064 ARHGAP23Q9P227 1491 aa21.78■■□□□ 1.08
CTDSP1-210ENST00000491064 SLIT1O75093 1534 aa21.78■■□□□ 1.08
CTDSP1-210ENST00000491064 LTKP29376 864 aa21.77■■□□□ 1.08
CTDSP1-210ENST00000491064 DUOX2Q9NRD8 1548 aa21.75■■□□□ 1.07
CTDSP1-210ENST00000491064 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
CTDSP1-210ENST00000491064 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
CTDSP1-210ENST00000491064 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
CTDSP1-210ENST00000491064 PRDM15P57071 1507 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-210ENST00000491064 MYOM3Q5VTT5 1437 aa21.71■■□□□ 1.07
CTDSP1-210ENST00000491064 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.06
CTDSP1-210ENST00000491064 PIK3C2BO00750 1634 aa21.69■■□□□ 1.06
CTDSP1-210ENST00000491064 EID1Q9Y6B2 187 aa21.68■■□□□ 1.06
CTDSP1-210ENST00000491064 FAM135BQ49AJ0 1406 aa21.68■■□□□ 1.06
CTDSP1-210ENST00000491064 KIF15Q9NS87 1388 aa21.67■■□□□ 1.06
CTDSP1-210ENST00000491064 KANK4Q5T7N3 995 aaPredicted RBP21.67■■□□□ 1.06
CTDSP1-210ENST00000491064 ERBINQ96RT1 1412 aa21.66■■□□□ 1.06
CTDSP1-210ENST00000491064 TMEM2Q9UHN6 1383 aa21.66■■□□□ 1.06
CTDSP1-210ENST00000491064 MAP3K1Q13233 1512 aa21.65■■□□□ 1.06
CTDSP1-210ENST00000491064 CROCC2H7BZ55 1655 aa21.65■■□□□ 1.06
CTDSP1-210ENST00000491064 KDM5AP29375 1690 aaKnown RBP21.64■■□□□ 1.05
CTDSP1-210ENST00000491064 TMEM94Q12767 1356 aa21.62■■□□□ 1.05
CTDSP1-210ENST00000491064 EFCAB6Q5THR3 1501 aa21.61■■□□□ 1.05
CTDSP1-210ENST00000491064 ROBO1Q9Y6N7 1651 aa21.61■■□□□ 1.05
CTDSP1-210ENST00000491064 ABCC5O15440 1437 aa21.61■■□□□ 1.05
CTDSP1-210ENST00000491064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.054e-17■□□□□ 10.2
CTDSP1-210ENST00000491064 RRP7BPQ9NSQ0 103 aa21.6■■□□□ 1.05
CTDSP1-210ENST00000491064 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
CTDSP1-210ENST00000491064 TET3O43151 1660 aa21.6■■□□□ 1.05
CTDSP1-210ENST00000491064 KCNA6P17658 529 aa21.59■■□□□ 1.05
CTDSP1-210ENST00000491064 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
CTDSP1-210ENST00000491064 KANK1Q14678 1352 aa21.58■■□□□ 1.04
CTDSP1-210ENST00000491064 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
CTDSP1-210ENST00000491064 IDI1Q13907 227 aa21.57■■□□□ 1.04
CTDSP1-210ENST00000491064 PTPN23Q9H3S7 1636 aa21.57■■□□□ 1.04
CTDSP1-210ENST00000491064 SLC26A8Q96RN1 970 aa21.55■■□□□ 1.04
CTDSP1-210ENST00000491064 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
CTDSP1-210ENST00000491064 DAPK1P53355 1430 aa21.55■■□□□ 1.04
CTDSP1-210ENST00000491064 PROSER2Q86WR7 435 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-210ENST00000491064 RBM33Q96EV2 1170 aaKnown RBP21.54■■□□□ 1.04
CTDSP1-210ENST00000491064 NKTRP30414 1462 aaKnown RBP21.53■■□□□ 1.04
CTDSP1-210ENST00000491064 ADGRB3O60242 1522 aa21.53■■□□□ 1.04
CTDSP1-210ENST00000491064 NOS1P29475 1434 aa21.52■■□□□ 1.04
CTDSP1-210ENST00000491064 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
CTDSP1-210ENST00000491064 PHLPP1O60346 1717 aa21.49■■□□□ 1.03
CTDSP1-210ENST00000491064 SETD1AO15047 1707 aaKnown RBP21.48■■□□□ 1.03
CTDSP1-210ENST00000491064 MSH6P52701 1360 aa21.48■■□□□ 1.03
CTDSP1-210ENST00000491064 ANKRD30AQ9BXX3 1397 aa21.48■■□□□ 1.03
CTDSP1-210ENST00000491064 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms