RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 FAM205CA6NFA0 338 aa15.05■□□□□ -0
TNRC6B-208ENST00000489500 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
TNRC6B-208ENST00000489500 HOXB1P14653 301 aaPredicted RBP15.04■□□□□ -0
TNRC6B-208ENST00000489500 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
TNRC6B-208ENST00000489500 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
TNRC6B-208ENST00000489500 C2orf72A6NCS6 295 aa14.98□□□□□ -0.01
TNRC6B-208ENST00000489500 KIF3CO14782 793 aa14.98□□□□□ -0.01
TNRC6B-208ENST00000489500 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
TNRC6B-208ENST00000489500 IQGAP2Q13576 1575 aa14.96□□□□□ -0.01
TNRC6B-208ENST00000489500 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
TNRC6B-208ENST00000489500 KIF13AQ9H1H9 1805 aa14.94□□□□□ -0.02
TNRC6B-208ENST00000489500 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
TNRC6B-208ENST00000489500 GPR153Q6NV75 609 aa14.94□□□□□ -0.02
TNRC6B-208ENST00000489500 PTPRGP23470 1445 aa14.93□□□□□ -0.02
TNRC6B-208ENST00000489500 ZSWIM6Q9HCJ5 1215 aa14.93□□□□□ -0.02
TNRC6B-208ENST00000489500 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
TNRC6B-208ENST00000489500 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
TNRC6B-208ENST00000489500 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
TNRC6B-208ENST00000489500 ERBB3P21860 1342 aa14.91□□□□□ -0.02
TNRC6B-208ENST00000489500 TTBK1Q5TCY1 1321 aaPredicted RBP14.91□□□□□ -0.02
TNRC6B-208ENST00000489500 FAM69CQ0P6D2 419 aa14.9□□□□□ -0.02
TNRC6B-208ENST00000489500 ARSIQ5FYB1 569 aa14.9□□□□□ -0.02
TNRC6B-208ENST00000489500 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
TNRC6B-208ENST00000489500 KRTAP3-3Q9BYR6 98 aa14.9□□□□□ -0.02
TNRC6B-208ENST00000489500 KRTAP3-2Q9BYR7 98 aa14.9□□□□□ -0.02
TNRC6B-208ENST00000489500 ABCC10Q5T3U5 1492 aa14.89□□□□□ -0.03
TNRC6B-208ENST00000489500 KHSRPQ92945 711 aaKnown RBP eCLIP14.88□□□□□ -0.032e-7■□□□□ 9.8
TNRC6B-208ENST00000489500 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
TNRC6B-208ENST00000489500 SPNS2Q8IVW8 549 aa14.87□□□□□ -0.03
TNRC6B-208ENST00000489500 TMC2Q8TDI7 906 aa14.87□□□□□ -0.03
TNRC6B-208ENST00000489500 VARS2Q5ST30 1063 aaKnown RBP14.85□□□□□ -0.03
TNRC6B-208ENST00000489500 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
TNRC6B-208ENST00000489500 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
TNRC6B-208ENST00000489500 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
TNRC6B-208ENST00000489500 TSPOAP1O95153 1857 aa14.82□□□□□ -0.04
TNRC6B-208ENST00000489500 UACAQ9BZF9 1416 aa14.82□□□□□ -0.04
TNRC6B-208ENST00000489500 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
TNRC6B-208ENST00000489500 UHRF1BP1LA0JNW5 1464 aa14.81□□□□□ -0.04
TNRC6B-208ENST00000489500 PLB1Q6P1J6 1458 aa14.8□□□□□ -0.04
TNRC6B-208ENST00000489500 DISP1Q96F81 1524 aa14.8□□□□□ -0.04
TNRC6B-208ENST00000489500 KIAA0556O60303 1618 aa14.79□□□□□ -0.04
TNRC6B-208ENST00000489500 MMRN1Q13201 1228 aa14.79□□□□□ -0.04
TNRC6B-208ENST00000489500 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
TNRC6B-208ENST00000489500 KDM6BO15054 1643 aa14.75□□□□□ -0.05
TNRC6B-208ENST00000489500 SLC34A2O95436 690 aa14.75□□□□□ -0.05
TNRC6B-208ENST00000489500 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
TNRC6B-208ENST00000489500 PCDHGA4Q9Y5G9 962 aa14.74□□□□□ -0.05
TNRC6B-208ENST00000489500 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
TNRC6B-208ENST00000489500 NUDT7P0C024 238 aa14.73□□□□□ -0.05
TNRC6B-208ENST00000489500 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
TNRC6B-208ENST00000489500 EEA1Q15075 1411 aa14.73□□□□□ -0.05
TNRC6B-208ENST00000489500 GLI2P10070 1586 aa14.73□□□□□ -0.05
TNRC6B-208ENST00000489500 ZNF687Q8N1G0 1237 aa14.72□□□□□ -0.05
TNRC6B-208ENST00000489500 ZCCHC11Q5TAX3 1644 aaKnown RBP14.72□□□□□ -0.05
TNRC6B-208ENST00000489500 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.05
TNRC6B-208ENST00000489500 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.05
TNRC6B-208ENST00000489500 FOXK1P85037 733 aa14.71□□□□□ -0.05
TNRC6B-208ENST00000489500 PLPP6Q8IY26 295 aa14.7□□□□□ -0.06
TNRC6B-208ENST00000489500 RYDENQ9NUL5 291 aaKnown RBP14.7□□□□□ -0.06
TNRC6B-208ENST00000489500 DSG2Q14126 1118 aa14.69□□□□□ -0.06
TNRC6B-208ENST00000489500 TEX14Q8IWB6 1497 aa14.67□□□□□ -0.06
TNRC6B-208ENST00000489500 LHX6Q9UPM6 363 aa14.66□□□□□ -0.06
TNRC6B-208ENST00000489500 EPRSP07814 1512 aaKnown RBP14.65□□□□□ -0.06
TNRC6B-208ENST00000489500 ABCA8O94911 1581 aa14.64□□□□□ -0.07
TNRC6B-208ENST00000489500 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
TNRC6B-208ENST00000489500 MAP3K4Q9Y6R4 1608 aa14.63□□□□□ -0.07
TNRC6B-208ENST00000489500 PTCD2Q8WV60 388 aaKnown RBP14.63□□□□□ -0.07
TNRC6B-208ENST00000489500 CRISPLD2Q9H0B8 497 aa14.61□□□□□ -0.07
TNRC6B-208ENST00000489500 PPRC1Q5VV67 1664 aaKnown RBP14.61□□□□□ -0.07
TNRC6B-208ENST00000489500 CFAP43Q8NDM7 1665 aa14.61□□□□□ -0.07
TNRC6B-208ENST00000489500 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
TNRC6B-208ENST00000489500 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
TNRC6B-208ENST00000489500 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
TNRC6B-208ENST00000489500 NCKAP5LQ9HCH0 1330 aa14.59□□□□□ -0.07
TNRC6B-208ENST00000489500 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
TNRC6B-208ENST00000489500 CD109Q6YHK3 1445 aa14.56□□□□□ -0.08
TNRC6B-208ENST00000489500 KIF21BO75037 1637 aa14.55□□□□□ -0.08
TNRC6B-208ENST00000489500 POTEEQ6S8J3 1075 aa14.55□□□□□ -0.08
TNRC6B-208ENST00000489500 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
TNRC6B-208ENST00000489500 RANGAP1P46060 587 aaPredicted RBP14.54□□□□□ -0.08
TNRC6B-208ENST00000489500 MAGI3Q5TCQ9 1506 aa14.53□□□□□ -0.08
TNRC6B-208ENST00000489500 PPP1R15BQ5SWA1 713 aa14.52□□□□□ -0.09
TNRC6B-208ENST00000489500 ANKRD13DQ6ZTN6 518 aa14.52□□□□□ -0.09
TNRC6B-208ENST00000489500 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
TNRC6B-208ENST00000489500 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
TNRC6B-208ENST00000489500 PDE4AP27815 886 aa14.51□□□□□ -0.09
TNRC6B-208ENST00000489500 AXIN2Q9Y2T1 843 aa14.51□□□□□ -0.09
TNRC6B-208ENST00000489500 ATP10BO94823 1461 aa14.5□□□□□ -0.09
TNRC6B-208ENST00000489500 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
TNRC6B-208ENST00000489500 UPF1Q92900 1129 aaKnown RBP eCLIP14.5□□□□□ -0.09
TNRC6B-208ENST00000489500 TBC1D12O60347 775 aa14.49□□□□□ -0.09
TNRC6B-208ENST00000489500 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.09
TNRC6B-208ENST00000489500 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
TNRC6B-208ENST00000489500 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
TNRC6B-208ENST00000489500 LARP6Q9BRS8 491 aaKnown RBP14.48□□□□□ -0.09
TNRC6B-208ENST00000489500 PLEKHD1A6NEE1 506 aa14.47□□□□□ -0.09
TNRC6B-208ENST00000489500 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
TNRC6B-208ENST00000489500 PBX2P40425 430 aa14.46□□□□□ -0.09
TNRC6B-208ENST00000489500 RTN4Q9NQC3 1192 aaKnown RBP14.46□□□□□ -0.09
TNRC6B-208ENST00000489500 FHOD3Q2V2M9 1422 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms