RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 GPHNQ9NQX3 736 aaPredicted RBP12.08□□□□□ -0.48
CACUL1-204ENST00000489169 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
CACUL1-204ENST00000489169 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
CACUL1-204ENST00000489169 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
CACUL1-204ENST00000489169 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
CACUL1-204ENST00000489169 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
CACUL1-204ENST00000489169 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
CACUL1-204ENST00000489169 PBX2P40425 430 aa12.04□□□□□ -0.48
CACUL1-204ENST00000489169 PTGER2P43116 358 aa12.04□□□□□ -0.48
CACUL1-204ENST00000489169 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
CACUL1-204ENST00000489169 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
CACUL1-204ENST00000489169 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
CACUL1-204ENST00000489169 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
CACUL1-204ENST00000489169 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
CACUL1-204ENST00000489169 CUX1P39880 1505 aa12.02□□□□□ -0.48
CACUL1-204ENST00000489169 DSG2Q14126 1118 aa12.02□□□□□ -0.49
CACUL1-204ENST00000489169 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
CACUL1-204ENST00000489169 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
CACUL1-204ENST00000489169 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
CACUL1-204ENST00000489169 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
CACUL1-204ENST00000489169 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
CACUL1-204ENST00000489169 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
CACUL1-204ENST00000489169 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
CACUL1-204ENST00000489169 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
CACUL1-204ENST00000489169 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
CACUL1-204ENST00000489169 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
CACUL1-204ENST00000489169 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
CACUL1-204ENST00000489169 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
CACUL1-204ENST00000489169 TBC1D12O60347 775 aa11.91□□□□□ -0.5
CACUL1-204ENST00000489169 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
CACUL1-204ENST00000489169 SOGA1O94964 1423 aa11.91□□□□□ -0.5
CACUL1-204ENST00000489169 KIF27Q86VH2 1401 aa11.91□□□□□ -0.5
CACUL1-204ENST00000489169 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
CACUL1-204ENST00000489169 ARHGAP33O14559 1287 aa11.9□□□□□ -0.5
CACUL1-204ENST00000489169 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
CACUL1-204ENST00000489169 NCKAP5LQ9HCH0 1330 aa11.89□□□□□ -0.51
CACUL1-204ENST00000489169 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
CACUL1-204ENST00000489169 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
CACUL1-204ENST00000489169 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CACUL1-204ENST00000489169 PPP1R15BQ5SWA1 713 aa11.87□□□□□ -0.51
CACUL1-204ENST00000489169 HECW2Q9P2P5 1572 aa11.86□□□□□ -0.51
CACUL1-204ENST00000489169 KIF21BO75037 1637 aa11.86□□□□□ -0.51
CACUL1-204ENST00000489169 WDR62O43379 1518 aa11.86□□□□□ -0.51
CACUL1-204ENST00000489169 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
CACUL1-204ENST00000489169 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
CACUL1-204ENST00000489169 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
CACUL1-204ENST00000489169 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
CACUL1-204ENST00000489169 PDE4AP27815 886 aa11.84□□□□□ -0.51
CACUL1-204ENST00000489169 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
CACUL1-204ENST00000489169 ADGRD1Q6QNK2 874 aa11.84□□□□□ -0.51
CACUL1-204ENST00000489169 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
CACUL1-204ENST00000489169 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
CACUL1-204ENST00000489169 TK2O00142 265 aa11.83□□□□□ -0.52
CACUL1-204ENST00000489169 RUSC2Q8N2Y8 1516 aa11.82□□□□□ -0.52
CACUL1-204ENST00000489169 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
CACUL1-204ENST00000489169 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
CACUL1-204ENST00000489169 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
CACUL1-204ENST00000489169 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACUL1-204ENST00000489169 LOC105371045A0A1W2PR82 267 aa11.8□□□□□ -0.52
CACUL1-204ENST00000489169 PSEN2P49810 448 aa11.8□□□□□ -0.52
CACUL1-204ENST00000489169 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
CACUL1-204ENST00000489169 IFT140Q96RY7 1462 aa11.79□□□□□ -0.52
CACUL1-204ENST00000489169 HRO43593 1189 aa11.79□□□□□ -0.52
CACUL1-204ENST00000489169 MFSD10Q14728 455 aa11.79□□□□□ -0.52
CACUL1-204ENST00000489169 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
CACUL1-204ENST00000489169 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
CACUL1-204ENST00000489169 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
CACUL1-204ENST00000489169 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
CACUL1-204ENST00000489169 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
CACUL1-204ENST00000489169 IGF1RP08069 1367 aa11.76□□□□□ -0.53
CACUL1-204ENST00000489169 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
CACUL1-204ENST00000489169 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
CACUL1-204ENST00000489169 CUL7Q14999 1698 aa11.75□□□□□ -0.53
CACUL1-204ENST00000489169 FOSBP53539 338 aa11.74□□□□□ -0.53
CACUL1-204ENST00000489169 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
CACUL1-204ENST00000489169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
CACUL1-204ENST00000489169 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
CACUL1-204ENST00000489169 GAPVD1Q14C86 1478 aa11.72□□□□□ -0.53
CACUL1-204ENST00000489169 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
CACUL1-204ENST00000489169 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.53
CACUL1-204ENST00000489169 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.53
CACUL1-204ENST00000489169 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
CACUL1-204ENST00000489169 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.54
CACUL1-204ENST00000489169 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
CACUL1-204ENST00000489169 EVI5O60447 810 aa11.7□□□□□ -0.54
CACUL1-204ENST00000489169 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
CACUL1-204ENST00000489169 SLC4A5Q9BY07 1137 aa11.7□□□□□ -0.54
CACUL1-204ENST00000489169 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
CACUL1-204ENST00000489169 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
CACUL1-204ENST00000489169 UBTFP17480 764 aaKnown RBP11.69□□□□□ -0.54
CACUL1-204ENST00000489169 CADPS2Q86UW7 1296 aa11.69□□□□□ -0.54
CACUL1-204ENST00000489169 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
CACUL1-204ENST00000489169 VPS9D1Q9Y2B5 631 aa11.69□□□□□ -0.54
CACUL1-204ENST00000489169 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
CACUL1-204ENST00000489169 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
CACUL1-204ENST00000489169 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
CACUL1-204ENST00000489169 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
CACUL1-204ENST00000489169 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
CACUL1-204ENST00000489169 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
CACUL1-204ENST00000489169 PTPREP23469 700 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms