RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 TNRQ92752 1358 aa17.31■□□□□ 0.36
YIPF3-207ENST00000488966 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
YIPF3-207ENST00000488966 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
YIPF3-207ENST00000488966 CCDC141Q6ZP82 1450 aa17.3■□□□□ 0.36
YIPF3-207ENST00000488966 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
YIPF3-207ENST00000488966 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
YIPF3-207ENST00000488966 PZPP20742 1482 aa17.28■□□□□ 0.36
YIPF3-207ENST00000488966 CAMSAP2Q08AD1 1489 aa17.28■□□□□ 0.36
YIPF3-207ENST00000488966 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
YIPF3-207ENST00000488966 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
YIPF3-207ENST00000488966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
YIPF3-207ENST00000488966 MIA2Q96PC5 1412 aa17.24■□□□□ 0.35
YIPF3-207ENST00000488966 HSPA1LP34931 641 aa17.24■□□□□ 0.35
YIPF3-207ENST00000488966 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
YIPF3-207ENST00000488966 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
YIPF3-207ENST00000488966 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
YIPF3-207ENST00000488966 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
YIPF3-207ENST00000488966 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
YIPF3-207ENST00000488966 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
YIPF3-207ENST00000488966 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
YIPF3-207ENST00000488966 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
YIPF3-207ENST00000488966 CPS1P31327 1500 aa17.21■□□□□ 0.35
YIPF3-207ENST00000488966 TOM1O60784 492 aa17.21■□□□□ 0.35
YIPF3-207ENST00000488966 NLRP1Q9C000 1473 aa17.2■□□□□ 0.34
YIPF3-207ENST00000488966 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
YIPF3-207ENST00000488966 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
YIPF3-207ENST00000488966 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
YIPF3-207ENST00000488966 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
YIPF3-207ENST00000488966 VWDEQ8N2E2 1590 aa17.17■□□□□ 0.34
YIPF3-207ENST00000488966 MED14O60244 1454 aa17.17■□□□□ 0.34
YIPF3-207ENST00000488966 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
YIPF3-207ENST00000488966 ABCC3O15438 1527 aa17.15■□□□□ 0.34
YIPF3-207ENST00000488966 KANK4Q5T7N3 995 aaPredicted RBP17.13■□□□□ 0.33
YIPF3-207ENST00000488966 DEPDC5O75140 1603 aa17.13■□□□□ 0.33
YIPF3-207ENST00000488966 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
YIPF3-207ENST00000488966 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
YIPF3-207ENST00000488966 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
YIPF3-207ENST00000488966 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
YIPF3-207ENST00000488966 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
YIPF3-207ENST00000488966 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
YIPF3-207ENST00000488966 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
YIPF3-207ENST00000488966 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
YIPF3-207ENST00000488966 MROH1Q8NDA8 1641 aa17.08■□□□□ 0.32
YIPF3-207ENST00000488966 LRRC7Q96NW7 1537 aa17.07■□□□□ 0.32
YIPF3-207ENST00000488966 MYOM3Q5VTT5 1437 aa17.07■□□□□ 0.32
YIPF3-207ENST00000488966 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
YIPF3-207ENST00000488966 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
YIPF3-207ENST00000488966 EIF2AK4Q9P2K8 1649 aaKnown RBP17.06■□□□□ 0.32
YIPF3-207ENST00000488966 LTKP29376 864 aa17.05■□□□□ 0.32
YIPF3-207ENST00000488966 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
YIPF3-207ENST00000488966 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
YIPF3-207ENST00000488966 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
YIPF3-207ENST00000488966 STRCP1A6NGW2 1772 aa17.04■□□□□ 0.32
YIPF3-207ENST00000488966 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
YIPF3-207ENST00000488966 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-207ENST00000488966 RRP7BPQ9NSQ0 103 aa17.03■□□□□ 0.32
YIPF3-207ENST00000488966 KIF15Q9NS87 1388 aa17.02■□□□□ 0.32
YIPF3-207ENST00000488966 ABCC5O15440 1437 aa17.02■□□□□ 0.31
YIPF3-207ENST00000488966 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
YIPF3-207ENST00000488966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
YIPF3-207ENST00000488966 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
YIPF3-207ENST00000488966 CEP152O94986 1710 aa17.01■□□□□ 0.31
YIPF3-207ENST00000488966 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
YIPF3-207ENST00000488966 SLIT1O75093 1534 aa16.99■□□□□ 0.31
YIPF3-207ENST00000488966 SYNMO15061 1565 aa16.98■□□□□ 0.31
YIPF3-207ENST00000488966 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
YIPF3-207ENST00000488966 PRDM15P57071 1507 aaPredicted RBP16.98■□□□□ 0.31
YIPF3-207ENST00000488966 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
YIPF3-207ENST00000488966 TMEM2Q9UHN6 1383 aa16.96■□□□□ 0.31
YIPF3-207ENST00000488966 DAPK1P53355 1430 aa16.95■□□□□ 0.3
YIPF3-207ENST00000488966 IDI1Q13907 227 aa16.94■□□□□ 0.3
YIPF3-207ENST00000488966 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
YIPF3-207ENST00000488966 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
YIPF3-207ENST00000488966 KANK1Q14678 1352 aa16.93■□□□□ 0.3
YIPF3-207ENST00000488966 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
YIPF3-207ENST00000488966 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
YIPF3-207ENST00000488966 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
YIPF3-207ENST00000488966 APLP2Q06481 763 aa16.91■□□□□ 0.3
YIPF3-207ENST00000488966 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-207ENST00000488966 TMEM94Q12767 1356 aa16.9■□□□□ 0.3
YIPF3-207ENST00000488966 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
YIPF3-207ENST00000488966 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
YIPF3-207ENST00000488966 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.3
YIPF3-207ENST00000488966 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
YIPF3-207ENST00000488966 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
YIPF3-207ENST00000488966 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
YIPF3-207ENST00000488966 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
YIPF3-207ENST00000488966 KCNA6P17658 529 aa16.88■□□□□ 0.29
YIPF3-207ENST00000488966 RBM33Q96EV2 1170 aaKnown RBP16.88■□□□□ 0.29
YIPF3-207ENST00000488966 NOS1P29475 1434 aa16.87■□□□□ 0.29
YIPF3-207ENST00000488966 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
YIPF3-207ENST00000488966 XIRP1Q702N8 1843 aaKnown RBP16.86■□□□□ 0.29
YIPF3-207ENST00000488966 TET3O43151 1660 aa16.85■□□□□ 0.29
YIPF3-207ENST00000488966 SLC52A1Q9NWF4 448 aa16.83■□□□□ 0.28
YIPF3-207ENST00000488966 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
YIPF3-207ENST00000488966 ADGRB3O60242 1522 aa16.81■□□□□ 0.28
YIPF3-207ENST00000488966 BCANQ96GW7 911 aa16.81■□□□□ 0.28
YIPF3-207ENST00000488966 POTEAQ6S8J7 498 aa16.8■□□□□ 0.28
YIPF3-207ENST00000488966 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
YIPF3-207ENST00000488966 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms