RNA–Protein interactions for RNA: ENST00000488943.1

REPIN1-213, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 1,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-213ENST00000488943 SHANK2Q9UPX8 1470 aa32.89■■■□□ 2.86
REPIN1-213ENST00000488943 RTEL1-TNFRSF6BF6WH68 1400 aa32.89■■■□□ 2.86
REPIN1-213ENST00000488943 ZNF644Q9H582 1327 aaPredicted RBP32.89■■■□□ 2.86
REPIN1-213ENST00000488943 DHX29Q7Z478 1369 aaKnown RBP32.88■■■□□ 2.85
REPIN1-213ENST00000488943 NEURL4Q96JN8 1562 aa32.87■■■□□ 2.85
REPIN1-213ENST00000488943 TIAM1Q13009 1591 aa32.87■■■□□ 2.85
REPIN1-213ENST00000488943 MBD5Q9P267 1494 aa32.86■■■□□ 2.85
REPIN1-213ENST00000488943 KIF3BO15066 747 aa32.85■■■□□ 2.85
REPIN1-213ENST00000488943 FBXO31Q5XUX0 539 aaPredicted RBP32.85■■■□□ 2.85
REPIN1-213ENST00000488943 ANKLE2Q86XL3 938 aa32.84■■■□□ 2.85
REPIN1-213ENST00000488943 KDM5DQ9BY66 1539 aa32.83■■■□□ 2.85
REPIN1-213ENST00000488943 PZPP20742 1482 aa32.83■■■□□ 2.85
REPIN1-213ENST00000488943 PHF23Q9BUL5 403 aaPredicted RBP32.81■■■□□ 2.84
REPIN1-213ENST00000488943 EHBP1L1Q8N3D4 1523 aa32.81■■■□□ 2.84
REPIN1-213ENST00000488943 FAM135AQ9P2D6 1515 aa32.81■■■□□ 2.84
REPIN1-213ENST00000488943 WASHC2CQ9Y4E1 1318 aa32.8■■■□□ 2.84
REPIN1-213ENST00000488943 THEMISQ8N1K5 641 aaPredicted RBP32.8■■■□□ 2.84
REPIN1-213ENST00000488943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.79■■■□□ 2.843e-6■■■■□ 22.5
REPIN1-213ENST00000488943 VWDEQ8N2E2 1590 aa32.75■■■□□ 2.83
REPIN1-213ENST00000488943 CCDC141Q6ZP82 1450 aa32.74■■■□□ 2.83
REPIN1-213ENST00000488943 NLRP1Q9C000 1473 aa32.74■■■□□ 2.83
REPIN1-213ENST00000488943 UGGT1Q9NYU2 1555 aa32.74■■■□□ 2.83
REPIN1-213ENST00000488943 NPHP4O75161 1426 aaPredicted RBP32.73■■■□□ 2.83
REPIN1-213ENST00000488943 CEP162Q5TB80 1403 aa32.72■■■□□ 2.83
REPIN1-213ENST00000488943 MIA2Q96PC5 1412 aa32.72■■■□□ 2.83
REPIN1-213ENST00000488943 DEPDC5O75140 1603 aa32.7■■■□□ 2.83
REPIN1-213ENST00000488943 RSPH4AQ5TD94 716 aa32.7■■■□□ 2.83
REPIN1-213ENST00000488943 MED14O60244 1454 aa32.69■■■□□ 2.82
REPIN1-213ENST00000488943 IQGAP1P46940 1657 aa32.66■■■□□ 2.82
REPIN1-213ENST00000488943 CAMSAP2Q08AD1 1489 aa32.66■■■□□ 2.82
REPIN1-213ENST00000488943 SENP3Q9H4L4 574 aaPredicted RBP32.63■■■□□ 2.81
REPIN1-213ENST00000488943 ALKQ9UM73 1620 aa32.62■■■□□ 2.81
REPIN1-213ENST00000488943 TSPY4P0CV99 314 aa32.6■■■□□ 2.81
REPIN1-213ENST00000488943 TSPY10P0CW01 314 aa32.6■■■□□ 2.81
REPIN1-213ENST00000488943 NCOA2Q15596 1464 aa32.58■■■□□ 2.81
REPIN1-213ENST00000488943 RNF17Q9BXT8 1623 aaKnown RBP32.57■■■□□ 2.8
REPIN1-213ENST00000488943 SYNMO15061 1565 aa32.57■■■□□ 2.8
REPIN1-213ENST00000488943 LRRC7Q96NW7 1537 aa32.56■■■□□ 2.8
REPIN1-213ENST00000488943 ARHGEF5Q12774 1597 aa32.54■■■□□ 2.8
REPIN1-213ENST00000488943 STRCP1A6NGW2 1772 aa32.54■■■□□ 2.8
REPIN1-213ENST00000488943 ZC3H13Q5T200 1668 aaKnown RBP32.53■■■□□ 2.8
REPIN1-213ENST00000488943 ABCC3O15438 1527 aa32.49■■■□□ 2.79
REPIN1-213ENST00000488943 ERVK-7P63135 1459 aa32.46■■■□□ 2.79
REPIN1-213ENST00000488943 EIF2AK4Q9P2K8 1649 aaKnown RBP32.42■■■□□ 2.78
REPIN1-213ENST00000488943 UBR1Q8IWV7 1749 aa32.41■■■□□ 2.78
REPIN1-213ENST00000488943 SCAF11Q99590 1463 aaKnown RBP32.41■■■□□ 2.78
REPIN1-213ENST00000488943 CFAP65Q6ZU64 1925 aaKnown RBP32.39■■■□□ 2.78
REPIN1-213ENST00000488943 MAST1Q9Y2H9 1570 aa32.39■■■□□ 2.78
REPIN1-213ENST00000488943 CEP152O94986 1710 aa32.37■■■□□ 2.77
REPIN1-213ENST00000488943 TXNDC2Q86VQ3 553 aa32.35■■■□□ 2.77
REPIN1-213ENST00000488943 EID1Q9Y6B2 187 aa32.32■■■□□ 2.76
REPIN1-213ENST00000488943 MROH1Q8NDA8 1641 aa32.32■■■□□ 2.76
REPIN1-213ENST00000488943 LTKP29376 864 aa32.3■■■□□ 2.76
REPIN1-213ENST00000488943 RGS17Q9UGC6 210 aaPredicted RBP32.3■■■□□ 2.76
REPIN1-213ENST00000488943 SLIT1O75093 1534 aa32.3■■■□□ 2.76
REPIN1-213ENST00000488943 ARHGAP23Q9P227 1491 aa32.29■■■□□ 2.76
REPIN1-213ENST00000488943 XIRP1Q702N8 1843 aaKnown RBP32.28■■■□□ 2.76
REPIN1-213ENST00000488943 DUOX2Q9NRD8 1548 aa32.26■■■□□ 2.75
REPIN1-213ENST00000488943 LRRC9Q6ZRR7 1453 aa32.25■■■□□ 2.75
REPIN1-213ENST00000488943 STAG3Q9UJ98 1225 aa32.22■■■□□ 2.75
REPIN1-213ENST00000488943 FAM135BQ49AJ0 1406 aa32.22■■■□□ 2.75
REPIN1-213ENST00000488943 ARHGAP31Q2M1Z3 1444 aa32.2■■■□□ 2.75
REPIN1-213ENST00000488943 MYOM3Q5VTT5 1437 aa32.18■■■□□ 2.74
REPIN1-213ENST00000488943 PIK3C2BO00750 1634 aa32.18■■■□□ 2.74
REPIN1-213ENST00000488943 PRDM15P57071 1507 aaPredicted RBP32.17■■■□□ 2.74
REPIN1-213ENST00000488943 TMEM2Q9UHN6 1383 aa32.16■■■□□ 2.74
REPIN1-213ENST00000488943 TMEM94Q12767 1356 aa32.15■■■□□ 2.74
REPIN1-213ENST00000488943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.14■■■□□ 2.74
REPIN1-213ENST00000488943 KIF15Q9NS87 1388 aa32.14■■■□□ 2.74
REPIN1-213ENST00000488943 ERBINQ96RT1 1412 aa32.12■■■□□ 2.73
REPIN1-213ENST00000488943 POTEAQ6S8J7 498 aa32.12■■■□□ 2.73
REPIN1-213ENST00000488943 ROBO1Q9Y6N7 1651 aa32.11■■■□□ 2.73
REPIN1-213ENST00000488943 VPS8Q8N3P4 1428 aa32.11■■■□□ 2.73
REPIN1-213ENST00000488943 KANK1Q14678 1352 aa32.11■■■□□ 2.73
REPIN1-213ENST00000488943 KCNA6P17658 529 aa32.1■■■□□ 2.73
REPIN1-213ENST00000488943 PROSER2Q86WR7 435 aaPredicted RBP32.09■■■□□ 2.73
REPIN1-213ENST00000488943 RRP7BPQ9NSQ0 103 aa32.09■■■□□ 2.73
REPIN1-213ENST00000488943 EFCAB6Q5THR3 1501 aa32.09■■■□□ 2.73
REPIN1-213ENST00000488943 KDM5AP29375 1690 aaKnown RBP32.08■■■□□ 2.73
REPIN1-213ENST00000488943 KANK4Q5T7N3 995 aaPredicted RBP32.06■■■□□ 2.72
REPIN1-213ENST00000488943 SLC26A8Q96RN1 970 aa32.05■■■□□ 2.72
REPIN1-213ENST00000488943 CROCC2H7BZ55 1655 aa32.05■■■□□ 2.72
REPIN1-213ENST00000488943 MAP3K1Q13233 1512 aa32.03■■■□□ 2.72
REPIN1-213ENST00000488943 IDI1Q13907 227 aa32.02■■■□□ 2.72
REPIN1-213ENST00000488943 RBM33Q96EV2 1170 aaKnown RBP32.02■■■□□ 2.72
REPIN1-213ENST00000488943 BCANQ96GW7 911 aa32.01■■■□□ 2.71
REPIN1-213ENST00000488943 TET3O43151 1660 aa31.99■■■□□ 2.71
REPIN1-213ENST00000488943 MSH6P52701 1360 aa31.99■■■□□ 2.71
REPIN1-213ENST00000488943 ABCC5O15440 1437 aa31.99■■■□□ 2.71
REPIN1-213ENST00000488943 NKTRP30414 1462 aaKnown RBP31.98■■■□□ 2.71
REPIN1-213ENST00000488943 PHLPP1O60346 1717 aa31.96■■■□□ 2.71
REPIN1-213ENST00000488943 PTPN23Q9H3S7 1636 aa31.95■■■□□ 2.71
REPIN1-213ENST00000488943 LMTK2Q8IWU2 1503 aa31.95■■■□□ 2.7
REPIN1-213ENST00000488943 NWD1Q149M9 1564 aa31.94■■■□□ 2.7
REPIN1-213ENST00000488943 SETD1AO15047 1707 aaKnown RBP31.93■■■□□ 2.7
REPIN1-213ENST00000488943 ADGRB3O60242 1522 aa31.93■■■□□ 2.7
REPIN1-213ENST00000488943 SLAIN2Q9P270 581 aa31.92■■■□□ 2.7
REPIN1-213ENST00000488943 JCADQ9P266 1359 aa31.92■■■□□ 2.7
REPIN1-213ENST00000488943 DAPK1P53355 1430 aa31.92■■■□□ 2.7
REPIN1-213ENST00000488943 ANKRD30AQ9BXX3 1397 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms