RNA–Protein interactions for RNA: ENST00000488411.1

ZC3H11A-210, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-210ENST00000488411 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
ZC3H11A-210ENST00000488411 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
ZC3H11A-210ENST00000488411 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
ZC3H11A-210ENST00000488411 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
ZC3H11A-210ENST00000488411 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
ZC3H11A-210ENST00000488411 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
ZC3H11A-210ENST00000488411 RABGEF1Q9UJ41 708 aa11.64□□□□□ -0.55
ZC3H11A-210ENST00000488411 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
ZC3H11A-210ENST00000488411 MFSD10Q14728 455 aa11.62□□□□□ -0.55
ZC3H11A-210ENST00000488411 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
ZC3H11A-210ENST00000488411 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
ZC3H11A-210ENST00000488411 PCDHGA10Q9Y5H3 936 aa11.6□□□□□ -0.55
ZC3H11A-210ENST00000488411 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
ZC3H11A-210ENST00000488411 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
ZC3H11A-210ENST00000488411 COL9A1P20849 921 aa11.57□□□□□ -0.56
ZC3H11A-210ENST00000488411 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
ZC3H11A-210ENST00000488411 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
ZC3H11A-210ENST00000488411 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
ZC3H11A-210ENST00000488411 PHF14O94880 888 aa11.55□□□□□ -0.56
ZC3H11A-210ENST00000488411 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
ZC3H11A-210ENST00000488411 NYAP1Q6ZVC0 841 aa11.55□□□□□ -0.56
ZC3H11A-210ENST00000488411 SOWAHBA6NEL2 793 aa11.54□□□□□ -0.56
ZC3H11A-210ENST00000488411 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
ZC3H11A-210ENST00000488411 BCAMP50895 628 aa11.53□□□□□ -0.56
ZC3H11A-210ENST00000488411 NCAPD3P42695 1498 aa11.52□□□□□ -0.56
ZC3H11A-210ENST00000488411 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
ZC3H11A-210ENST00000488411 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
ZC3H11A-210ENST00000488411 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
ZC3H11A-210ENST00000488411 ATAD2BQ9ULI0 1458 aa11.48□□□□□ -0.57
ZC3H11A-210ENST00000488411 SMARCA4P51532 1647 aa11.46□□□□□ -0.57
ZC3H11A-210ENST00000488411 SMARCA2P51531 1590 aa11.46□□□□□ -0.57
ZC3H11A-210ENST00000488411 KCNC4Q03721 635 aa11.46□□□□□ -0.57
ZC3H11A-210ENST00000488411 C6orf132Q5T0Z8 1188 aa11.46□□□□□ -0.57
ZC3H11A-210ENST00000488411 EPAS1Q99814 870 aa11.46□□□□□ -0.57
ZC3H11A-210ENST00000488411 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
ZC3H11A-210ENST00000488411 CUX2O14529 1486 aa11.44□□□□□ -0.58
ZC3H11A-210ENST00000488411 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
ZC3H11A-210ENST00000488411 Q6ZNB5 142 aa11.43□□□□□ -0.58
ZC3H11A-210ENST00000488411 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
ZC3H11A-210ENST00000488411 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
ZC3H11A-210ENST00000488411 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
ZC3H11A-210ENST00000488411 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
ZC3H11A-210ENST00000488411 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
ZC3H11A-210ENST00000488411 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
ZC3H11A-210ENST00000488411 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
ZC3H11A-210ENST00000488411 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
ZC3H11A-210ENST00000488411 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.39□□□□□ -0.59
ZC3H11A-210ENST00000488411 NESP48681 1621 aa11.38□□□□□ -0.59
ZC3H11A-210ENST00000488411 LAPTM4AQ15012 233 aa11.37□□□□□ -0.59
ZC3H11A-210ENST00000488411 LRCH3Q96II8 777 aa11.37□□□□□ -0.59
ZC3H11A-210ENST00000488411 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
ZC3H11A-210ENST00000488411 DPYSL4O14531 572 aa11.36□□□□□ -0.59
ZC3H11A-210ENST00000488411 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
ZC3H11A-210ENST00000488411 PEG3Q9GZU2 1588 aa11.32□□□□□ -0.6
ZC3H11A-210ENST00000488411 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
ZC3H11A-210ENST00000488411 MROH2BQ7Z745 1585 aa11.31□□□□□ -0.6
ZC3H11A-210ENST00000488411 DDX12PQ92771 950 aa11.3□□□□□ -0.6
ZC3H11A-210ENST00000488411 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
ZC3H11A-210ENST00000488411 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
ZC3H11A-210ENST00000488411 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
ZC3H11A-210ENST00000488411 PPP4CP60510 307 aa11.28□□□□□ -0.6
ZC3H11A-210ENST00000488411 GFRA3O60609 400 aa11.27□□□□□ -0.61
ZC3H11A-210ENST00000488411 LCE2BO14633 110 aa11.26□□□□□ -0.61
ZC3H11A-210ENST00000488411 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
ZC3H11A-210ENST00000488411 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
ZC3H11A-210ENST00000488411 NBR1Q14596 966 aa11.25□□□□□ -0.61
ZC3H11A-210ENST00000488411 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
ZC3H11A-210ENST00000488411 MAP3K7O43318 606 aa11.24□□□□□ -0.61
ZC3H11A-210ENST00000488411 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
ZC3H11A-210ENST00000488411 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
ZC3H11A-210ENST00000488411 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
ZC3H11A-210ENST00000488411 PDIA6Q15084 440 aa11.22□□□□□ -0.61
ZC3H11A-210ENST00000488411 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
ZC3H11A-210ENST00000488411 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
ZC3H11A-210ENST00000488411 PRSS12P56730 875 aa11.2□□□□□ -0.62
ZC3H11A-210ENST00000488411 PRKD2Q9BZL6 878 aa11.2□□□□□ -0.62
ZC3H11A-210ENST00000488411 IL21Q9HBE4 155 aa11.2□□□□□ -0.62
ZC3H11A-210ENST00000488411 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
ZC3H11A-210ENST00000488411 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
ZC3H11A-210ENST00000488411 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
ZC3H11A-210ENST00000488411 CERKQ8TCT0 537 aa11.19□□□□□ -0.62
ZC3H11A-210ENST00000488411 MTRQ99707 1265 aa11.19□□□□□ -0.62
ZC3H11A-210ENST00000488411 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
ZC3H11A-210ENST00000488411 WIZO95785 1651 aa11.18□□□□□ -0.62
ZC3H11A-210ENST00000488411 SMAPO00193 183 aa11.18□□□□□ -0.62
ZC3H11A-210ENST00000488411 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
ZC3H11A-210ENST00000488411 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
ZC3H11A-210ENST00000488411 TATDN2Q93075 761 aa11.16□□□□□ -0.62
ZC3H11A-210ENST00000488411 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
ZC3H11A-210ENST00000488411 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
ZC3H11A-210ENST00000488411 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
ZC3H11A-210ENST00000488411 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
ZC3H11A-210ENST00000488411 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
ZC3H11A-210ENST00000488411 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
ZC3H11A-210ENST00000488411 ZNF516Q92618 1163 aa11.11□□□□□ -0.63
ZC3H11A-210ENST00000488411 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
ZC3H11A-210ENST00000488411 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
ZC3H11A-210ENST00000488411 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
ZC3H11A-210ENST00000488411 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
ZC3H11A-210ENST00000488411 APLP1P51693 650 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms