RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 WASHC2CQ9Y4E1 1318 aa29.22■■■□□ 2.27
HDAC10-215ENST00000488270 CLTCQ00610 1675 aaKnown RBP29.22■■■□□ 2.27
HDAC10-215ENST00000488270 NCOA1Q15788 1441 aa29.22■■■□□ 2.27
HDAC10-215ENST00000488270 UHRF1BP1Q6BDS2 1440 aa29.21■■■□□ 2.27
HDAC10-215ENST00000488270 CROCC2H7BZ55 1655 aa29.21■■■□□ 2.27
HDAC10-215ENST00000488270 SETD1BQ9UPS6 1966 aaKnown RBP29.2■■■□□ 2.26
HDAC10-215ENST00000488270 ANKRD30AQ9BXX3 1397 aa29.19■■■□□ 2.26
HDAC10-215ENST00000488270 FBXO31Q5XUX0 539 aaPredicted RBP29.17■■■□□ 2.26
HDAC10-215ENST00000488270 PREX1Q8TCU6 1659 aa29.17■■■□□ 2.26
HDAC10-215ENST00000488270 KDM5DQ9BY66 1539 aa29.16■■■□□ 2.26
HDAC10-215ENST00000488270 FAM135AQ9P2D6 1515 aa29.16■■■□□ 2.26
HDAC10-215ENST00000488270 ERBINQ96RT1 1412 aa29.15■■■□□ 2.26
HDAC10-215ENST00000488270 RNF17Q9BXT8 1623 aaKnown RBP29.15■■■□□ 2.26
HDAC10-215ENST00000488270 ADGRL2O95490 1459 aa29.15■■■□□ 2.26
HDAC10-215ENST00000488270 EIF2AK4Q9P2K8 1649 aaKnown RBP29.13■■■□□ 2.25
HDAC10-215ENST00000488270 MROH1Q8NDA8 1641 aa29.12■■■□□ 2.25
HDAC10-215ENST00000488270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.12■■■□□ 2.25
HDAC10-215ENST00000488270 PZPP20742 1482 aa29.1■■■□□ 2.25
HDAC10-215ENST00000488270 ABCC3O15438 1527 aa29.1■■■□□ 2.25
HDAC10-215ENST00000488270 TNRQ92752 1358 aa29.03■■■□□ 2.24
HDAC10-215ENST00000488270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.03■■■□□ 2.248e-7■■■■□ 22.3
HDAC10-215ENST00000488270 RRBP1Q9P2E9 1410 aaKnown RBP29.02■■■□□ 2.24
HDAC10-215ENST00000488270 ROCK1Q13464 1354 aa29.01■■■□□ 2.24
HDAC10-215ENST00000488270 PRDM15P57071 1507 aaPredicted RBP29.01■■■□□ 2.23
HDAC10-215ENST00000488270 ANKRD50Q9ULJ7 1429 aa29.01■■■□□ 2.23
HDAC10-215ENST00000488270 ITGAEP38570 1179 aa28.99■■■□□ 2.23
HDAC10-215ENST00000488270 STRCQ7RTU9 1775 aa28.97■■■□□ 2.23
HDAC10-215ENST00000488270 DEPDC5O75140 1603 aa28.97■■■□□ 2.23
HDAC10-215ENST00000488270 ARHGAP31Q2M1Z3 1444 aa28.96■■■□□ 2.23
HDAC10-215ENST00000488270 MYO3AQ8NEV4 1616 aa28.96■■■□□ 2.23
HDAC10-215ENST00000488270 A2ML1A8K2U0 1454 aa28.95■■■□□ 2.22
HDAC10-215ENST00000488270 ZC3H13Q5T200 1668 aaKnown RBP28.95■■■□□ 2.22
HDAC10-215ENST00000488270 VWDEQ8N2E2 1590 aa28.94■■■□□ 2.22
HDAC10-215ENST00000488270 CEP170BQ9Y4F5 1589 aaPredicted RBP28.94■■■□□ 2.22
HDAC10-215ENST00000488270 DMRT2Q9Y5R5 561 aa28.94■■■□□ 2.22
HDAC10-215ENST00000488270 KANK1Q14678 1352 aa28.93■■■□□ 2.22
HDAC10-215ENST00000488270 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
HDAC10-215ENST00000488270 ERVK-7P63135 1459 aa28.91■■■□□ 2.22
HDAC10-215ENST00000488270 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
HDAC10-215ENST00000488270 LMTK2Q8IWU2 1503 aa28.91■■■□□ 2.22
HDAC10-215ENST00000488270 SPATA31D1Q6ZQQ2 1576 aa28.91■■■□□ 2.22
HDAC10-215ENST00000488270 ZNF142P52746 1687 aaPredicted RBP28.9■■■□□ 2.22
HDAC10-215ENST00000488270 PTPRTO14522 1441 aa28.89■■■□□ 2.22
HDAC10-215ENST00000488270 NLRP1Q9C000 1473 aa28.89■■■□□ 2.22
HDAC10-215ENST00000488270 CEP152O94986 1710 aa28.89■■■□□ 2.21
HDAC10-215ENST00000488270 PLA2R1Q13018 1463 aa28.87■■■□□ 2.21
HDAC10-215ENST00000488270 PKD2Q13563 968 aa28.85■■■□□ 2.21
HDAC10-215ENST00000488270 THEMISQ8N1K5 641 aaPredicted RBP28.83■■■□□ 2.21
HDAC10-215ENST00000488270 ILDR1Q86SU0 546 aaPredicted RBP28.78■■■□□ 2.2
HDAC10-215ENST00000488270 UGGT1Q9NYU2 1555 aa28.77■■■□□ 2.2
HDAC10-215ENST00000488270 EFCAB6Q5THR3 1501 aa28.76■■■□□ 2.19
HDAC10-215ENST00000488270 NOS1P29475 1434 aa28.76■■■□□ 2.19
HDAC10-215ENST00000488270 IDI1Q13907 227 aa28.74■■■□□ 2.19
HDAC10-215ENST00000488270 NAIPQ13075 1403 aa28.74■■■□□ 2.19
HDAC10-215ENST00000488270 UNC13BO14795 1591 aa28.74■■■□□ 2.19
HDAC10-215ENST00000488270 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
HDAC10-215ENST00000488270 CERKQ8TCT0 537 aa28.73■■■□□ 2.19
HDAC10-215ENST00000488270 NUP155O75694 1391 aa28.72■■■□□ 2.19
HDAC10-215ENST00000488270 CFAP65Q6ZU64 1925 aaKnown RBP28.71■■■□□ 2.19
HDAC10-215ENST00000488270 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
HDAC10-215ENST00000488270 SYNMO15061 1565 aa28.67■■■□□ 2.18
HDAC10-215ENST00000488270 FBXO41Q8TF61 875 aa28.66■■■□□ 2.18
HDAC10-215ENST00000488270 SLC52A1Q9NWF4 448 aa28.66■■■□□ 2.18
HDAC10-215ENST00000488270 HFM1A2PYH4 1435 aa28.66■■■□□ 2.18
HDAC10-215ENST00000488270 NEURL4Q96JN8 1562 aa28.66■■■□□ 2.18
HDAC10-215ENST00000488270 TET3O43151 1660 aa28.64■■■□□ 2.18
HDAC10-215ENST00000488270 LTBP4Q8N2S1 1624 aa28.64■■■□□ 2.18
HDAC10-215ENST00000488270 MED14O60244 1454 aa28.64■■■□□ 2.17
HDAC10-215ENST00000488270 ZNF335Q9H4Z2 1342 aaPredicted RBP28.64■■■□□ 2.17
HDAC10-215ENST00000488270 LTKP29376 864 aa28.63■■■□□ 2.17
HDAC10-215ENST00000488270 IQGAP3Q86VI3 1631 aa28.62■■■□□ 2.17
HDAC10-215ENST00000488270 ARHGAP23Q9P227 1491 aa28.62■■■□□ 2.17
HDAC10-215ENST00000488270 UBR1Q8IWV7 1749 aa28.61■■■□□ 2.17
HDAC10-215ENST00000488270 SLIT1O75093 1534 aa28.59■■■□□ 2.17
HDAC10-215ENST00000488270 TMEM2Q9UHN6 1383 aa28.59■■■□□ 2.17
HDAC10-215ENST00000488270 NPHP4O75161 1426 aaPredicted RBP28.59■■■□□ 2.17
HDAC10-215ENST00000488270 PIK3C2BO00750 1634 aa28.58■■■□□ 2.17
HDAC10-215ENST00000488270 TXNDC2Q86VQ3 553 aa28.58■■■□□ 2.17
HDAC10-215ENST00000488270 STAG3Q9UJ98 1225 aa28.57■■■□□ 2.16
HDAC10-215ENST00000488270 E9PCH4 1651 aa28.54■■■□□ 2.16
HDAC10-215ENST00000488270 GCC2Q8IWJ2 1684 aa28.54■■■□□ 2.16
HDAC10-215ENST00000488270 SCAF11Q99590 1463 aaKnown RBP28.53■■■□□ 2.16
HDAC10-215ENST00000488270 POLR1AO95602 1720 aaPredicted RBP28.52■■■□□ 2.16
HDAC10-215ENST00000488270 EID1Q9Y6B2 187 aa28.51■■■□□ 2.15
HDAC10-215ENST00000488270 KDM5AP29375 1690 aaKnown RBP28.49■■■□□ 2.15
HDAC10-215ENST00000488270 ADGRB3O60242 1522 aa28.48■■■□□ 2.15
HDAC10-215ENST00000488270 TRIM52Q96A61 297 aa28.47■■■□□ 2.15
HDAC10-215ENST00000488270 IQGAP1P46940 1657 aa28.43■■■□□ 2.14
HDAC10-215ENST00000488270 ZFYVE9O95405 1425 aa28.43■■■□□ 2.14
HDAC10-215ENST00000488270 TMEM131LA2VDJ0 1609 aa28.42■■■□□ 2.14
HDAC10-215ENST00000488270 IQSEC2Q5JU85 1478 aa28.41■■■□□ 2.14
HDAC10-215ENST00000488270 SLC4A1APQ9BWU0 796 aaKnown RBP28.4■■■□□ 2.14
HDAC10-215ENST00000488270 CHGAP10645 457 aaKnown RBP28.39■■■□□ 2.14
HDAC10-215ENST00000488270 RIMS2Q9UQ26 1411 aa28.37■■■□□ 2.13
HDAC10-215ENST00000488270 SLC26A8Q96RN1 970 aa28.35■■■□□ 2.13
HDAC10-215ENST00000488270 CPS1P31327 1500 aa28.34■■■□□ 2.13
HDAC10-215ENST00000488270 SETD5Q9C0A6 1442 aa28.34■■■□□ 2.13
HDAC10-215ENST00000488270 HDGFP51858 240 aaKnown RBP28.33■■■□□ 2.13
HDAC10-215ENST00000488270 FOXD1Q16676 465 aa28.31■■■□□ 2.12
HDAC10-215ENST00000488270 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms