RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.728e-15■■□□□ 13.8
PTEN-204ENST00000487939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTEN-204ENST00000487939 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
PTEN-204ENST00000487939 MAP3K7O43318 606 aa10.54□□□□□ -0.72
PTEN-204ENST00000487939 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
PTEN-204ENST00000487939 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
PTEN-204ENST00000487939 KCNH8Q96L42 1107 aa10.52□□□□□ -0.73
PTEN-204ENST00000487939 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
PTEN-204ENST00000487939 BCL2L12Q9HB09 334 aa10.52□□□□□ -0.73
PTEN-204ENST00000487939 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
PTEN-204ENST00000487939 NUTM2FA1L443 756 aa10.5□□□□□ -0.73
PTEN-204ENST00000487939 PTPREP23469 700 aa10.5□□□□□ -0.73
PTEN-204ENST00000487939 PBX2P40425 430 aa10.5□□□□□ -0.73
PTEN-204ENST00000487939 PRIM1P49642 420 aaKnown RBP10.49□□□□□ -0.73
PTEN-204ENST00000487939 GPIHBP1Q8IV16 184 aa10.49□□□□□ -0.73
PTEN-204ENST00000487939 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
PTEN-204ENST00000487939 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
PTEN-204ENST00000487939 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
PTEN-204ENST00000487939 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
PTEN-204ENST00000487939 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
PTEN-204ENST00000487939 FCHSD2O94868 740 aa10.45□□□□□ -0.74
PTEN-204ENST00000487939 KCNK17Q96T54 332 aa10.45□□□□□ -0.74
PTEN-204ENST00000487939 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
PTEN-204ENST00000487939 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
PTEN-204ENST00000487939 CDHR5Q9HBB8 845 aa10.43□□□□□ -0.74
PTEN-204ENST00000487939 PTGDRQ13258 359 aa10.42□□□□□ -0.74
PTEN-204ENST00000487939 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
PTEN-204ENST00000487939 HIC1Q14526 733 aa10.4□□□□□ -0.74
PTEN-204ENST00000487939 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
PTEN-204ENST00000487939 PSEN2P49810 448 aa10.39□□□□□ -0.75
PTEN-204ENST00000487939 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
PTEN-204ENST00000487939 NPDC1Q9NQX5 325 aaPredicted RBP10.39□□□□□ -0.75
PTEN-204ENST00000487939 COL9A1P20849 921 aa10.38□□□□□ -0.75
PTEN-204ENST00000487939 RBM27Q9P2N5 1060 aaKnown RBP10.38□□□□□ -0.75
PTEN-204ENST00000487939 GNPATO15228 680 aa10.37□□□□□ -0.75
PTEN-204ENST00000487939 GPR37O15354 613 aa10.37□□□□□ -0.75
PTEN-204ENST00000487939 PRSS12P56730 875 aa10.36□□□□□ -0.75
PTEN-204ENST00000487939 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
PTEN-204ENST00000487939 ADGRD1Q6QNK2 874 aa10.35□□□□□ -0.75
PTEN-204ENST00000487939 ONECUT3O60422 494 aaPredicted RBP10.34□□□□□ -0.75
PTEN-204ENST00000487939 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
PTEN-204ENST00000487939 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
PTEN-204ENST00000487939 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
PTEN-204ENST00000487939 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
PTEN-204ENST00000487939 TK2O00142 265 aa10.33□□□□□ -0.76
PTEN-204ENST00000487939 ZMYND10O75800 440 aa10.33□□□□□ -0.76
PTEN-204ENST00000487939 TRIM6-TRIM34B2RNG4 842 aa10.32□□□□□ -0.76
PTEN-204ENST00000487939 PADI6Q6TGC4 694 aa10.32□□□□□ -0.76
PTEN-204ENST00000487939 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
PTEN-204ENST00000487939 PACS2Q86VP3 889 aa10.31□□□□□ -0.76
PTEN-204ENST00000487939 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
PTEN-204ENST00000487939 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
PTEN-204ENST00000487939 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
PTEN-204ENST00000487939 HRO43593 1189 aa10.29□□□□□ -0.76
PTEN-204ENST00000487939 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
PTEN-204ENST00000487939 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
PTEN-204ENST00000487939 MINK1Q8N4C8 1332 aaPredicted RBP10.29□□□□□ -0.76
PTEN-204ENST00000487939 NBPF26B4DH59 902 aa10.28□□□□□ -0.76
PTEN-204ENST00000487939 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
PTEN-204ENST00000487939 TSKSQ9UJT2 592 aa10.28□□□□□ -0.76
PTEN-204ENST00000487939 FECHP22830 423 aa10.26□□□□□ -0.77
PTEN-204ENST00000487939 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
PTEN-204ENST00000487939 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
PTEN-204ENST00000487939 OATP04181 439 aa10.25□□□□□ -0.77
PTEN-204ENST00000487939 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
PTEN-204ENST00000487939 IRF6O14896 467 aa10.24□□□□□ -0.77
PTEN-204ENST00000487939 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
PTEN-204ENST00000487939 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
PTEN-204ENST00000487939 ADGRG1Q9Y653 693 aa10.24□□□□□ -0.77
PTEN-204ENST00000487939 TATDN2Q93075 761 aa10.23□□□□□ -0.77
PTEN-204ENST00000487939 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
PTEN-204ENST00000487939 NUDT18Q6ZVK8 323 aa10.21□□□□□ -0.77
PTEN-204ENST00000487939 LAPTM4BQ86VI4 370 aa10.21□□□□□ -0.77
PTEN-204ENST00000487939 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
PTEN-204ENST00000487939 AK7Q96M32 723 aa10.21□□□□□ -0.77
PTEN-204ENST00000487939 BHMG1C9JSJ3 638 aaPredicted RBP10.2□□□□□ -0.78
PTEN-204ENST00000487939 MRPL50Q8N5N7 158 aaKnown RBP10.2□□□□□ -0.78
PTEN-204ENST00000487939 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
PTEN-204ENST00000487939 PRKCSHP14314 528 aaPredicted RBP10.19□□□□□ -0.78
PTEN-204ENST00000487939 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
PTEN-204ENST00000487939 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
PTEN-204ENST00000487939 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
PTEN-204ENST00000487939 METTL3Q86U44 580 aaKnown RBP10.18□□□□□ -0.78
PTEN-204ENST00000487939 PXYLP1Q8TE99 480 aa10.18□□□□□ -0.78
PTEN-204ENST00000487939 EYA1Q99502 592 aa10.18□□□□□ -0.78
PTEN-204ENST00000487939 SEPT9Q9UHD8 586 aaPredicted RBP10.17□□□□□ -0.78
PTEN-204ENST00000487939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.16□□□□□ -0.78
PTEN-204ENST00000487939 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
PTEN-204ENST00000487939 SMAPO00193 183 aa10.16□□□□□ -0.78
PTEN-204ENST00000487939 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
PTEN-204ENST00000487939 DNAJB2P25686 324 aa10.15□□□□□ -0.78
PTEN-204ENST00000487939 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
PTEN-204ENST00000487939 RCCD1A6NED2 376 aa10.13□□□□□ -0.79
PTEN-204ENST00000487939 TRIM66O15016 1216 aa10.13□□□□□ -0.79
PTEN-204ENST00000487939 RGS20O76081 388 aa10.13□□□□□ -0.79
PTEN-204ENST00000487939 IFFO2Q5TF58 517 aa10.13□□□□□ -0.79
PTEN-204ENST00000487939 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
PTEN-204ENST00000487939 AMHR2Q16671 573 aa10.11□□□□□ -0.79
PTEN-204ENST00000487939 ZFRQ96KR1 1074 aaKnown RBP10.11□□□□□ -0.79
PTEN-204ENST00000487939 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms