RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 AKAP17AQ02040 695 aaKnown RBP19.08■□□□□ 0.65
PKD1-220ENST00000487932 IFFO2Q5TF58 517 aa19.08■□□□□ 0.65
PKD1-220ENST00000487932 CCAR2Q8N163 923 aaKnown RBP19.08■□□□□ 0.64
PKD1-220ENST00000487932 KIF16BQ96L93 1317 aa19.08■□□□□ 0.64
PKD1-220ENST00000487932 RILPL2Q969X0 211 aa19.07■□□□□ 0.64
PKD1-220ENST00000487932 DHX16O60231 1041 aaKnown RBP19.07■□□□□ 0.64
PKD1-220ENST00000487932 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
PKD1-220ENST00000487932 CCDC180Q9P1Z9 1646 aa19.06■□□□□ 0.64
PKD1-220ENST00000487932 PTMSP20962 102 aa19.06■□□□□ 0.64
PKD1-220ENST00000487932 CSPP1Q1MSJ5 1256 aa19.06■□□□□ 0.64
PKD1-220ENST00000487932 RCAN3Q9UKA8 241 aa19.06■□□□□ 0.64
PKD1-220ENST00000487932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
PKD1-220ENST00000487932 HDAC5Q9UQL6 1122 aa19.04■□□□□ 0.64
PKD1-220ENST00000487932 CHMP4AQ9BY43 222 aa19.04■□□□□ 0.64
PKD1-220ENST00000487932 TSR1Q2NL82 804 aaKnown RBP19.04■□□□□ 0.64
PKD1-220ENST00000487932 PCMTD1Q96MG8 357 aaPredicted RBP19.04■□□□□ 0.64
PKD1-220ENST00000487932 PMFBP1Q8TBY8 1022 aa19.03■□□□□ 0.64
PKD1-220ENST00000487932 C1orf141Q5JVX7 400 aa19.03■□□□□ 0.64
PKD1-220ENST00000487932 KIF3BO15066 747 aa19.03■□□□□ 0.64
PKD1-220ENST00000487932 TERF2IPQ9NYB0 399 aa19.03■□□□□ 0.64
PKD1-220ENST00000487932 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
PKD1-220ENST00000487932 FAM184AQ8NB25 1140 aa19.02■□□□□ 0.64
PKD1-220ENST00000487932 AMOTL1Q8IY63 956 aa19.02■□□□□ 0.64
PKD1-220ENST00000487932 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
PKD1-220ENST00000487932 TPM2P07951 284 aa19.01■□□□□ 0.63
PKD1-220ENST00000487932 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
PKD1-220ENST00000487932 RRP7AQ9Y3A4 280 aaKnown RBP19■□□□□ 0.63
PKD1-220ENST00000487932 VPS37DQ86XT2 251 aa19■□□□□ 0.63
PKD1-220ENST00000487932 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
PKD1-220ENST00000487932 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
PKD1-220ENST00000487932 SYNE3Q6ZMZ3 975 aa18.99■□□□□ 0.63
PKD1-220ENST00000487932 APPP05067 770 aa18.99■□□□□ 0.63
PKD1-220ENST00000487932 EIF2S2P20042 333 aaKnown RBP18.98■□□□□ 0.63
PKD1-220ENST00000487932 GOLGA6L3A6NEY3 463 aa18.97■□□□□ 0.63
PKD1-220ENST00000487932 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
PKD1-220ENST00000487932 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.97■□□□□ 0.632e-7■■■■■ 77.6
PKD1-220ENST00000487932 TRAK1Q9UPV9 953 aa18.96■□□□□ 0.63
PKD1-220ENST00000487932 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
PKD1-220ENST00000487932 KIF3AQ9Y496 699 aa18.95■□□□□ 0.62
PKD1-220ENST00000487932 CCDC43Q96MW1 224 aaKnown RBP18.95■□□□□ 0.62
PKD1-220ENST00000487932 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
PKD1-220ENST00000487932 EEA1Q15075 1411 aa18.94■□□□□ 0.62
PKD1-220ENST00000487932 ST18O60284 1047 aa18.94■□□□□ 0.62
PKD1-220ENST00000487932 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
PKD1-220ENST00000487932 LMOD3Q0VAK6 560 aa18.93■□□□□ 0.62
PKD1-220ENST00000487932 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
PKD1-220ENST00000487932 NUP155O75694 1391 aa18.93■□□□□ 0.62
PKD1-220ENST00000487932 FYB1O15117 783 aa18.92■□□□□ 0.62
PKD1-220ENST00000487932 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.62
PKD1-220ENST00000487932 FOSBP53539 338 aa18.91■□□□□ 0.62
PKD1-220ENST00000487932 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
PKD1-220ENST00000487932 CENPJQ9HC77 1338 aaPredicted RBP18.91■□□□□ 0.62
PKD1-220ENST00000487932 GOLGA6L19H0YKK7 550 aa18.91■□□□□ 0.62
PKD1-220ENST00000487932 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
PKD1-220ENST00000487932 TPM1P09493 284 aa18.9■□□□□ 0.62
PKD1-220ENST00000487932 TRIM29Q14134 588 aa18.9■□□□□ 0.62
PKD1-220ENST00000487932 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
PKD1-220ENST00000487932 MTMR7Q9Y216 660 aa18.9■□□□□ 0.62
PKD1-220ENST00000487932 PHF14O94880 888 aa18.9■□□□□ 0.62
PKD1-220ENST00000487932 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.62
PKD1-220ENST00000487932 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.62
PKD1-220ENST00000487932 TEFQ10587 303 aa18.89■□□□□ 0.61
PKD1-220ENST00000487932 BECN2A8MW95 431 aa18.89■□□□□ 0.61
PKD1-220ENST00000487932 ZNF592Q92610 1267 aa18.89■□□□□ 0.61
PKD1-220ENST00000487932 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
PKD1-220ENST00000487932 PPP1R1BQ9UD71 204 aaPredicted RBP18.88■□□□□ 0.61
PKD1-220ENST00000487932 RBM19Q9Y4C8 960 aaKnown RBP18.88■□□□□ 0.61
PKD1-220ENST00000487932 C9orf78Q9NZ63 289 aaPredicted RBP18.88■□□□□ 0.61
PKD1-220ENST00000487932 CEP164Q9UPV0 1460 aa18.88■□□□□ 0.61
PKD1-220ENST00000487932 RALBP1Q15311 655 aa18.87■□□□□ 0.61
PKD1-220ENST00000487932 NFXL1Q6ZNB6 911 aa18.87■□□□□ 0.61
PKD1-220ENST00000487932 RBM33Q96EV2 1170 aaKnown RBP18.87■□□□□ 0.61
PKD1-220ENST00000487932 KDM4AO75164 1064 aa18.86■□□□□ 0.61
PKD1-220ENST00000487932 NEXNQ0ZGT2 675 aa18.86■□□□□ 0.61
PKD1-220ENST00000487932 DIAPH3Q9NSV4 1193 aa18.86■□□□□ 0.61
PKD1-220ENST00000487932 CCDC70Q6NSX1 233 aa18.85■□□□□ 0.61
PKD1-220ENST00000487932 SLC4A3P48751 1232 aa18.85■□□□□ 0.61
PKD1-220ENST00000487932 COG3Q96JB2 828 aa18.85■□□□□ 0.61
PKD1-220ENST00000487932 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
PKD1-220ENST00000487932 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
PKD1-220ENST00000487932 CCDC47Q96A33 483 aaKnown RBP18.83■□□□□ 0.61
PKD1-220ENST00000487932 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.61
PKD1-220ENST00000487932 NAP1L1P55209 391 aaKnown RBP18.83■□□□□ 0.6
PKD1-220ENST00000487932 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.6
PKD1-220ENST00000487932 CT47A1Q5JQC4 288 aaPredicted RBP18.82■□□□□ 0.6
PKD1-220ENST00000487932 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 CUX2O14529 1486 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 ZFYVE27Q5T4F4 411 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 CPLX1O14810 134 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 PSME1Q06323 249 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 ODF2Q5BJF6 829 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
PKD1-220ENST00000487932 PAF1Q8N7H5 531 aa18.81■□□□□ 0.6
PKD1-220ENST00000487932 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
PKD1-220ENST00000487932 R3HCC1Q9Y3T6 440 aaKnown RBP18.81■□□□□ 0.6
PKD1-220ENST00000487932 TMEM132AQ24JP5 1023 aa18.8■□□□□ 0.6
PKD1-220ENST00000487932 CPLX2Q6PUV4 134 aaKnown RBP18.8■□□□□ 0.6
PKD1-220ENST00000487932 IKQ13123 557 aaPredicted RBP18.8■□□□□ 0.6
PKD1-220ENST00000487932 ERICH2A1L162 156 aa18.8■□□□□ 0.6
PKD1-220ENST00000487932 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms